EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000007886 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 773 bases
Position: chrJH651537.1:13810897-13811669
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000010576	AD	PF09793.9	1.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000010727	-	750	-	ENSODEP00000010576	249 (aa)	-	-

Gene Model

Click here to download ENSODEG00000007886's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000007886's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000007886	-	74	89.231	ENSODEG00000017998	-	100	89.231

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000007886	-	74	88.718	ENSG00000161654	LSM12	100	88.718	Homo_sapiens
ENSODEG00000007886	-	74	78.571	ENSAPOG00000007907	lsm12b	100	78.571	Acanthochromis_polyacanthus
ENSODEG00000007886	-	74	86.869	ENSAMEG00000018321	LSM12	100	86.869	Ailuropoda_melanoleuca
ENSODEG00000007886	-	74	76.531	ENSACIG00000008538	lsm12b	100	76.531	Amphilophus_citrinellus
ENSODEG00000007886	-	74	78.061	ENSAOCG00000021847	lsm12b	88	78.061	Amphiprion_ocellaris
ENSODEG00000007886	-	74	78.061	ENSAPEG00000002252	lsm12b	100	78.061	Amphiprion_percula
ENSODEG00000007886	-	74	77.551	ENSATEG00000005705	lsm12b	100	77.551	Anabas_testudineus
ENSODEG00000007886	-	74	83.590	ENSACAG00000004618	LSM12	100	83.590	Anolis_carolinensis
ENSODEG00000007886	-	74	88.718	ENSANAG00000029011	LSM12	100	88.718	Aotus_nancymaae
ENSODEG00000007886	-	74	77.041	ENSACLG00000026332	lsm12b	100	77.041	Astatotilapia_calliptera
ENSODEG00000007886	-	74	77.041	ENSAMXG00000032952	lsm12b	100	77.041	Astyanax_mexicanus
ENSODEG00000007886	-	73	73.711	ENSAMXG00000036117	lsm12a	90	73.711	Astyanax_mexicanus
ENSODEG00000007886	-	74	88.718	ENSBTAG00000016252	LSM12	100	88.718	Bos_taurus
ENSODEG00000007886	-	74	88.718	ENSCJAG00000048480	LSM12	100	88.718	Callithrix_jacchus
ENSODEG00000007886	-	74	88.718	ENSCAFG00000014379	LSM12	92	88.718	Canis_familiaris
ENSODEG00000007886	-	74	88.718	ENSCAFG00020012173	LSM12	100	88.718	Canis_lupus_dingo
ENSODEG00000007886	-	74	88.718	ENSCHIG00000018175	LSM12	100	88.718	Capra_hircus
ENSODEG00000007886	-	74	88.718	ENSTSYG00000036361	LSM12	100	88.718	Carlito_syrichta
ENSODEG00000007886	-	62	84.568	ENSCAPG00000009647	LSM12	89	84.568	Cavia_aperea
ENSODEG00000007886	-	74	87.692	ENSCPOG00000012860	LSM12	100	87.692	Cavia_porcellus
ENSODEG00000007886	-	74	88.718	ENSCCAG00000032905	LSM12	100	88.718	Cebus_capucinus
ENSODEG00000007886	-	74	88.718	ENSCATG00000030577	-	100	88.718	Cercocebus_atys
ENSODEG00000007886	-	74	88.718	ENSCLAG00000015759	LSM12	100	88.718	Chinchilla_lanigera
ENSODEG00000007886	-	74	88.205	ENSCSAG00000003486	LSM12	100	88.205	Chlorocebus_sabaeus
ENSODEG00000007886	-	74	83.590	ENSCPBG00000027105	LSM12	100	83.590	Chrysemys_picta_bellii
ENSODEG00000007886	-	74	88.718	ENSCANG00000043328	LSM12	100	88.718	Colobus_angolensis_palliatus
ENSODEG00000007886	-	74	88.718	ENSCGRG00001002094	Lsm12	100	88.718	Cricetulus_griseus_chok1gshd
ENSODEG00000007886	-	59	88.312	ENSCGRG00000004316	Lsm12	87	88.312	Cricetulus_griseus_crigri
ENSODEG00000007886	-	74	77.041	ENSCSEG00000008434	lsm12b	100	77.041	Cynoglossus_semilaevis
ENSODEG00000007886	-	74	77.041	ENSCVAG00000008755	lsm12b	100	77.041	Cyprinodon_variegatus
ENSODEG00000007886	-	74	77.041	ENSDARG00000109510	lsm12b	100	77.041	Danio_rerio
ENSODEG00000007886	-	74	70.408	ENSDARG00000028848	lsm12a	100	70.408	Danio_rerio
ENSODEG00000007886	-	74	88.205	ENSDNOG00000002418	LSM12	91	88.205	Dasypus_novemcinctus
ENSODEG00000007886	-	74	88.718	ENSDORG00000016381	Lsm12	100	88.718	Dipodomys_ordii
ENSODEG00000007886	-	53	34.247	FBgn0030364	Lsm12	85	30.882	Drosophila_melanogaster
ENSODEG00000007886	-	54	31.013	FBgn0036057	CG14164	83	31.013	Drosophila_melanogaster
ENSODEG00000007886	-	67	80.925	ENSETEG00000011012	-	99	80.925	Echinops_telfairi
ENSODEG00000007886	-	74	88.205	ENSETEG00000008374	LSM12	100	88.205	Echinops_telfairi
ENSODEG00000007886	-	62	58.182	ENSEBUG00000016299	lsm12a	92	58.182	Eptatretus_burgeri
ENSODEG00000007886	-	74	88.718	ENSEASG00005010155	LSM12	100	88.718	Equus_asinus_asinus
ENSODEG00000007886	-	74	88.718	ENSECAG00000009071	LSM12	100	88.718	Equus_caballus
ENSODEG00000007886	-	59	86.928	ENSEEUG00000002419	-	100	86.928	Erinaceus_europaeus
ENSODEG00000007886	-	74	76.020	ENSELUG00000000256	-	100	76.020	Esox_lucius
ENSODEG00000007886	-	74	76.531	ENSELUG00000015538	lsm12b	100	71.939	Esox_lucius
ENSODEG00000007886	-	74	88.718	ENSFCAG00000037021	LSM12	100	88.718	Felis_catus
ENSODEG00000007886	-	57	90.909	ENSFDAG00000008954	LSM12	84	90.909	Fukomys_damarensis
ENSODEG00000007886	-	74	76.020	ENSFHEG00000019913	lsm12b	100	76.020	Fundulus_heteroclitus
ENSODEG00000007886	-	61	77.215	ENSGMOG00000015449	lsm12b	100	77.215	Gadus_morhua
ENSODEG00000007886	-	59	83.660	ENSGALG00000039803	LSM12	100	83.660	Gallus_gallus
ENSODEG00000007886	-	74	76.531	ENSGAFG00000011829	lsm12b	100	76.531	Gambusia_affinis
ENSODEG00000007886	-	61	77.215	ENSGACG00000003428	lsm12b	100	77.215	Gasterosteus_aculeatus
ENSODEG00000007886	-	74	84.615	ENSGAGG00000021965	LSM12	100	84.615	Gopherus_agassizii
ENSODEG00000007886	-	74	88.718	ENSGGOG00000010589	-	100	88.718	Gorilla_gorilla
ENSODEG00000007886	-	62	77.711	ENSHBUG00000007667	lsm12b	73	77.711	Haplochromis_burtoni
ENSODEG00000007886	-	74	88.718	ENSHGLG00000011411	LSM12	100	88.718	Heterocephalus_glaber_female
ENSODEG00000007886	-	68	77.901	ENSHGLG00100000241	LSM12	96	77.901	Heterocephalus_glaber_male
ENSODEG00000007886	-	74	77.041	ENSHCOG00000002094	lsm12b	100	77.041	Hippocampus_comes
ENSODEG00000007886	-	74	77.041	ENSIPUG00000014800	lsm12	100	77.041	Ictalurus_punctatus
ENSODEG00000007886	-	74	68.367	ENSIPUG00000008936	lsm12a	100	68.367	Ictalurus_punctatus
ENSODEG00000007886	-	74	88.718	ENSSTOG00000007403	LSM12	100	88.718	Ictidomys_tridecemlineatus
ENSODEG00000007886	-	74	87.692	ENSJJAG00000004364	-	100	87.692	Jaculus_jaculus
ENSODEG00000007886	-	72	77.895	ENSJJAG00000011793	-	100	77.895	Jaculus_jaculus
ENSODEG00000007886	-	56	80.272	ENSJJAG00000014652	-	87	80.272	Jaculus_jaculus
ENSODEG00000007886	-	62	79.518	ENSKMAG00000007704	lsm12b	56	79.518	Kryptolebias_marmoratus
ENSODEG00000007886	-	74	78.061	ENSLBEG00000027999	lsm12b	100	78.061	Labrus_bergylta
ENSODEG00000007886	-	74	81.026	ENSLACG00000015981	LSM12	100	81.026	Latimeria_chalumnae
ENSODEG00000007886	-	74	75.510	ENSLOCG00000013079	lsm12b	99	75.510	Lepisosteus_oculatus
ENSODEG00000007886	-	74	88.718	ENSLAFG00000005202	LSM12	100	88.718	Loxodonta_africana
ENSODEG00000007886	-	74	88.718	ENSMFAG00000031376	LSM12	100	88.718	Macaca_fascicularis
ENSODEG00000007886	-	50	79.310	ENSMMUG00000042106	-	100	79.310	Macaca_mulatta
ENSODEG00000007886	-	50	79.310	ENSMMUG00000038408	-	100	79.310	Macaca_mulatta
ENSODEG00000007886	-	74	88.718	ENSMMUG00000006804	LSM12	100	88.718	Macaca_mulatta
ENSODEG00000007886	-	74	88.718	ENSMNEG00000030594	-	100	88.718	Macaca_nemestrina
ENSODEG00000007886	-	74	88.718	ENSMLEG00000039934	LSM12	100	88.718	Mandrillus_leucophaeus
ENSODEG00000007886	-	74	77.551	ENSMAMG00000004279	lsm12b	100	77.551	Mastacembelus_armatus
ENSODEG00000007886	-	74	77.041	ENSMZEG00005005754	lsm12b	100	77.041	Maylandia_zebra
ENSODEG00000007886	-	74	88.205	ENSMICG00000037219	LSM12	100	88.205	Microcebus_murinus
ENSODEG00000007886	-	74	88.718	ENSMOCG00000019878	-	100	88.718	Microtus_ochrogaster
ENSODEG00000007886	-	74	75.897	ENSMOCG00000017015	-	86	75.897	Microtus_ochrogaster
ENSODEG00000007886	-	74	77.551	ENSMMOG00000020848	lsm12b	100	77.551	Mola_mola
ENSODEG00000007886	-	74	77.551	ENSMALG00000007578	lsm12b	100	77.551	Monopterus_albus
ENSODEG00000007886	-	74	88.205	MGP_CAROLIEiJ_G0017241	Lsm12	100	88.205	Mus_caroli
ENSODEG00000007886	-	74	88.718	ENSMUSG00000020922	Lsm12	100	88.718	Mus_musculus
ENSODEG00000007886	-	74	81.604	MGP_PahariEiJ_G0018371	Lsm12	100	81.604	Mus_pahari
ENSODEG00000007886	-	74	88.205	MGP_SPRETEiJ_G0018084	Lsm12	100	88.205	Mus_spretus
ENSODEG00000007886	-	74	88.205	ENSMLUG00000006391	LSM12	100	88.205	Myotis_lucifugus
ENSODEG00000007886	-	74	88.718	ENSNGAG00000001870	Lsm12	100	88.718	Nannospalax_galili
ENSODEG00000007886	-	73	62.944	ENSNGAG00000015429	-	99	62.944	Nannospalax_galili
ENSODEG00000007886	-	74	77.041	ENSNBRG00000006266	lsm12b	100	77.041	Neolamprologus_brichardi
ENSODEG00000007886	-	74	88.718	ENSNLEG00000005580	-	100	88.718	Nomascus_leucogenys
ENSODEG00000007886	-	62	86.667	ENSMEUG00000007501	-	100	86.667	Notamacropus_eugenii
ENSODEG00000007886	-	74	88.718	ENSOPRG00000008552	LSM12	100	88.718	Ochotona_princeps
ENSODEG00000007886	-	74	77.041	ENSONIG00000007933	lsm12b	100	77.041	Oreochromis_niloticus
ENSODEG00000007886	-	74	86.869	ENSOCUG00000008566	-	100	86.869	Oryctolagus_cuniculus
ENSODEG00000007886	-	73	83.938	ENSOCUG00000027889	-	99	83.938	Oryctolagus_cuniculus
ENSODEG00000007886	-	73	82.902	ENSOCUG00000024823	-	99	82.902	Oryctolagus_cuniculus
ENSODEG00000007886	-	73	85.492	ENSOCUG00000021254	-	99	85.492	Oryctolagus_cuniculus
ENSODEG00000007886	-	74	77.551	ENSORLG00000011310	lsm12b	100	77.551	Oryzias_latipes
ENSODEG00000007886	-	74	77.551	ENSORLG00020002060	lsm12b	92	77.551	Oryzias_latipes_hni
ENSODEG00000007886	-	74	77.551	ENSORLG00015001647	lsm12b	92	77.551	Oryzias_latipes_hsok
ENSODEG00000007886	-	74	77.551	ENSOMEG00000006184	lsm12b	92	77.551	Oryzias_melastigma
ENSODEG00000007886	-	74	88.205	ENSOGAG00000010489	LSM12	100	88.205	Otolemur_garnettii
ENSODEG00000007886	-	74	85.572	ENSOARG00000006589	LSM12	100	85.572	Ovis_aries
ENSODEG00000007886	-	74	78.646	ENSPPAG00000034974	-	100	78.646	Pan_paniscus
ENSODEG00000007886	-	74	88.718	ENSPPRG00000023420	LSM12	100	88.718	Panthera_pardus
ENSODEG00000007886	-	74	65.426	ENSPTIG00000014850	-	100	65.426	Panthera_tigris_altaica
ENSODEG00000007886	-	59	88.235	ENSPTIG00000012704	-	82	88.235	Panthera_tigris_altaica
ENSODEG00000007886	-	74	88.718	ENSPTRG00000009261	LSM12	100	88.718	Pan_troglodytes
ENSODEG00000007886	-	74	88.718	ENSPANG00000021315	-	100	88.718	Papio_anubis
ENSODEG00000007886	-	74	77.551	ENSPKIG00000021058	lsm12b	100	77.551	Paramormyrops_kingsleyae
ENSODEG00000007886	-	74	70.619	ENSPKIG00000017932	-	99	70.619	Paramormyrops_kingsleyae
ENSODEG00000007886	-	74	76.531	ENSPMGG00000021344	lsm12b	100	76.531	Periophthalmus_magnuspinnatus
ENSODEG00000007886	-	74	88.718	ENSPEMG00000012199	Lsm12	100	88.718	Peromyscus_maniculatus_bairdii
ENSODEG00000007886	-	66	60.345	ENSPMAG00000005461	lsm12a	99	60.345	Petromyzon_marinus
ENSODEG00000007886	-	74	86.667	ENSPCIG00000020244	LSM12	100	86.667	Phascolarctos_cinereus
ENSODEG00000007886	-	74	75.510	ENSPFOG00000015930	lsm12b	100	75.510	Poecilia_formosa
ENSODEG00000007886	-	74	75.510	ENSPLAG00000021089	lsm12b	100	75.510	Poecilia_latipinna
ENSODEG00000007886	-	74	75.510	ENSPMEG00000012961	lsm12b	100	75.510	Poecilia_mexicana
ENSODEG00000007886	-	66	78.363	ENSPREG00000010236	lsm12b	95	78.363	Poecilia_reticulata
ENSODEG00000007886	-	74	88.718	ENSPPYG00000008344	LSM12	100	88.718	Pongo_abelii
ENSODEG00000007886	-	60	88.050	ENSPCAG00000008790	LSM12	100	88.050	Procavia_capensis
ENSODEG00000007886	-	74	88.718	ENSPCOG00000027951	LSM12	100	88.718	Propithecus_coquereli
ENSODEG00000007886	-	74	88.205	ENSPVAG00000013706	LSM12	100	88.205	Pteropus_vampyrus
ENSODEG00000007886	-	74	77.041	ENSPNYG00000003386	lsm12b	100	77.041	Pundamilia_nyererei
ENSODEG00000007886	-	73	71.649	ENSPNAG00000018435	lsm12a	99	71.649	Pygocentrus_nattereri
ENSODEG00000007886	-	74	75.510	ENSPNAG00000004186	lsm12b	100	75.510	Pygocentrus_nattereri
ENSODEG00000007886	-	74	88.718	ENSRNOG00000020894	Lsm12	100	88.718	Rattus_norvegicus
ENSODEG00000007886	-	74	88.718	ENSRBIG00000027910	LSM12	100	88.718	Rhinopithecus_bieti
ENSODEG00000007886	-	74	59.043	ENSRROG00000000537	-	100	59.043	Rhinopithecus_roxellana
ENSODEG00000007886	-	74	88.718	ENSRROG00000045530	-	100	88.718	Rhinopithecus_roxellana
ENSODEG00000007886	-	74	88.718	ENSSBOG00000025310	LSM12	100	88.718	Saimiri_boliviensis_boliviensis
ENSODEG00000007886	-	61	84.177	ENSSHAG00000014914	LSM12	100	84.177	Sarcophilus_harrisii
ENSODEG00000007886	-	74	78.571	ENSSFOG00015009612	lsm12	100	78.571	Scleropages_formosus
ENSODEG00000007886	-	74	76.531	ENSSFOG00015020392	lsm12a	100	76.531	Scleropages_formosus
ENSODEG00000007886	-	74	77.551	ENSSMAG00000008089	lsm12b	100	77.551	Scophthalmus_maximus
ENSODEG00000007886	-	74	77.551	ENSSDUG00000012711	lsm12b	100	77.551	Seriola_dumerili
ENSODEG00000007886	-	74	77.551	ENSSLDG00000007404	lsm12b	100	77.551	Seriola_lalandi_dorsalis
ENSODEG00000007886	-	59	87.582	ENSSARG00000005537	LSM12	100	87.582	Sorex_araneus
ENSODEG00000007886	-	74	85.128	ENSSPUG00000011984	LSM12	100	85.128	Sphenodon_punctatus
ENSODEG00000007886	-	74	78.061	ENSSPAG00000017058	lsm12b	100	78.061	Stegastes_partitus
ENSODEG00000007886	-	74	88.718	ENSSSCG00000032394	LSM12	100	88.718	Sus_scrofa
ENSODEG00000007886	-	74	76.531	ENSTRUG00000007121	lsm12b	100	76.531	Takifugu_rubripes
ENSODEG00000007886	-	74	77.041	ENSTNIG00000014436	lsm12b	100	77.041	Tetraodon_nigroviridis
ENSODEG00000007886	-	74	86.154	ENSTBEG00000012392	-	100	86.154	Tupaia_belangeri
ENSODEG00000007886	-	74	88.205	ENSTBEG00000012523	-	100	88.205	Tupaia_belangeri
ENSODEG00000007886	-	74	88.718	ENSTTRG00000010433	LSM12	100	88.718	Tursiops_truncatus
ENSODEG00000007886	-	74	88.718	ENSUAMG00000006313	LSM12	100	88.718	Ursus_americanus
ENSODEG00000007886	-	61	85.443	ENSUMAG00000012987	LSM12	90	85.443	Ursus_maritimus
ENSODEG00000007886	-	74	83.077	ENSVPAG00000011145	LSM12	100	83.077	Vicugna_pacos
ENSODEG00000007886	-	74	88.718	ENSVVUG00000017581	LSM12	100	88.718	Vulpes_vulpes
ENSODEG00000007886	-	60	62.338	ENSXETG00000003371	lsm12	76	62.338	Xenopus_tropicalis
ENSODEG00000007886	-	74	76.531	ENSXCOG00000003994	lsm12b	100	76.531	Xiphophorus_couchianus
ENSODEG00000007886	-	74	76.531	ENSXMAG00000020950	lsm12b	100	76.531	Xiphophorus_maculatus