EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000007985 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 560 bases
Position: chrJH651563.1:4785891-4786450
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000010715	RNA_pol_Rpb5_N	PF03871.14	2.3e-28	1	1
ENSODEP00000010715	RNA_pol_Rpb5_C	PF01191.19	5.9e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000010868	-	540	-	ENSODEP00000010715	179 (aa)	-	-

Gene Model

Click here to download ENSODEG00000007985's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000007985's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000007985	-	100	62.162	ENSODEG00000011490	-	86	62.162
ENSODEG00000007985	-	100	88.710	ENSODEG00000013230	-	89	88.710

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000007985	-	100	88.710	ENSG00000099817	POLR2E	91	88.710	Homo_sapiens
ENSODEG00000007985	-	100	84.946	ENSAPOG00000002935	polr2eb	89	84.946	Acanthochromis_polyacanthus
ENSODEG00000007985	-	100	88.710	ENSAMEG00000003159	POLR2E	89	88.710	Ailuropoda_melanoleuca
ENSODEG00000007985	-	100	71.505	ENSACIG00000024371	polr2eb	87	71.505	Amphilophus_citrinellus
ENSODEG00000007985	-	100	84.946	ENSAOCG00000018166	polr2eb	89	84.946	Amphiprion_ocellaris
ENSODEG00000007985	-	100	84.946	ENSAPEG00000009000	polr2eb	89	84.946	Amphiprion_percula
ENSODEG00000007985	-	100	84.946	ENSATEG00000023760	polr2eb	89	84.946	Anabas_testudineus
ENSODEG00000007985	-	100	88.710	ENSANAG00000038488	POLR2E	89	88.710	Aotus_nancymaae
ENSODEG00000007985	-	100	85.484	ENSACLG00000005254	polr2eb	89	85.484	Astatotilapia_calliptera
ENSODEG00000007985	-	100	85.484	ENSAMXG00000018915	POLR2E	89	85.484	Astyanax_mexicanus
ENSODEG00000007985	-	100	88.710	ENSBTAG00000020776	POLR2E	89	88.710	Bos_taurus
ENSODEG00000007985	-	99	67.027	WBGene00019246	rpb-5	88	67.027	Caenorhabditis_elegans
ENSODEG00000007985	-	57	88.073	ENSCJAG00000007666	-	60	88.073	Callithrix_jacchus
ENSODEG00000007985	-	99	87.500	ENSCAFG00000019546	POLR2E	88	87.500	Canis_familiaris
ENSODEG00000007985	-	100	88.710	ENSCAFG00020017111	POLR2E	89	88.710	Canis_lupus_dingo
ENSODEG00000007985	-	100	88.710	ENSCHIG00000014151	POLR2E	89	88.710	Capra_hircus
ENSODEG00000007985	-	77	86.806	ENSTSYG00000026377	POLR2E	73	86.806	Carlito_syrichta
ENSODEG00000007985	-	90	89.286	ENSCAPG00000010843	POLR2E	82	89.286	Cavia_aperea
ENSODEG00000007985	-	100	88.710	ENSCPOG00000001542	POLR2E	89	88.710	Cavia_porcellus
ENSODEG00000007985	-	100	88.710	ENSCCAG00000025658	POLR2E	89	88.710	Cebus_capucinus
ENSODEG00000007985	-	100	88.710	ENSCATG00000008926	POLR2E	89	88.710	Cercocebus_atys
ENSODEG00000007985	-	100	88.172	ENSCLAG00000014874	-	89	88.172	Chinchilla_lanigera
ENSODEG00000007985	-	99	68.649	ENSCLAG00000009238	-	89	68.649	Chinchilla_lanigera
ENSODEG00000007985	-	100	88.710	ENSCSAG00000012336	POLR2E	89	88.710	Chlorocebus_sabaeus
ENSODEG00000007985	-	100	88.172	ENSCPBG00000009702	POLR2E	89	88.172	Chrysemys_picta_bellii
ENSODEG00000007985	-	100	76.882	ENSCING00000024933	-	88	76.882	Ciona_intestinalis
ENSODEG00000007985	-	100	88.710	ENSCANG00000025560	POLR2E	89	88.710	Colobus_angolensis_palliatus
ENSODEG00000007985	-	100	87.634	ENSCGRG00001022927	Polr2e	89	87.634	Cricetulus_griseus_chok1gshd
ENSODEG00000007985	-	100	80.628	ENSCGRG00000016441	Polr2e	89	80.628	Cricetulus_griseus_crigri
ENSODEG00000007985	-	100	83.871	ENSCSEG00000007107	polr2eb	81	83.871	Cynoglossus_semilaevis
ENSODEG00000007985	-	100	84.946	ENSCVAG00000019940	polr2eb	89	84.946	Cyprinodon_variegatus
ENSODEG00000007985	-	100	84.409	ENSDARG00000026183	polr2eb	89	84.409	Danio_rerio
ENSODEG00000007985	-	100	88.710	ENSDNOG00000044994	POLR2E	82	88.710	Dasypus_novemcinctus
ENSODEG00000007985	-	100	88.710	ENSDORG00000001154	Polr2e	89	88.710	Dipodomys_ordii
ENSODEG00000007985	-	100	76.882	FBgn0033571	Rpb5	89	76.882	Drosophila_melanogaster
ENSODEG00000007985	-	84	81.529	ENSEBUG00000010159	-	76	81.529	Eptatretus_burgeri
ENSODEG00000007985	-	100	88.710	ENSECAG00000011124	POLR2E	87	74.731	Equus_caballus
ENSODEG00000007985	-	100	83.333	ENSELUG00000005815	POLR2E	89	83.333	Esox_lucius
ENSODEG00000007985	-	100	82.258	ENSELUG00000020646	polr2e	89	82.258	Esox_lucius
ENSODEG00000007985	-	100	88.172	ENSFCAG00000007318	POLR2E	89	88.172	Felis_catus
ENSODEG00000007985	-	90	88.690	ENSFALG00000013986	POLR2E	87	88.690	Ficedula_albicollis
ENSODEG00000007985	-	100	88.710	ENSFDAG00000014539	POLR2E	89	88.710	Fukomys_damarensis
ENSODEG00000007985	-	100	84.946	ENSFHEG00000022398	polr2eb	89	84.946	Fundulus_heteroclitus
ENSODEG00000007985	-	100	83.871	ENSGMOG00000007615	polr2eb	89	83.871	Gadus_morhua
ENSODEG00000007985	-	100	88.172	ENSGALG00000002591	POLR2E	89	88.172	Gallus_gallus
ENSODEG00000007985	-	100	85.484	ENSGAFG00000005087	polr2eb	89	85.484	Gambusia_affinis
ENSODEG00000007985	-	100	83.871	ENSGACG00000013247	polr2eb	89	83.871	Gasterosteus_aculeatus
ENSODEG00000007985	-	100	88.172	ENSGAGG00000008356	POLR2E	89	88.172	Gopherus_agassizii
ENSODEG00000007985	-	100	88.710	ENSGGOG00000011267	POLR2E	89	88.710	Gorilla_gorilla
ENSODEG00000007985	-	62	78.814	ENSHBUG00000011099	polr2eb	83	78.814	Haplochromis_burtoni
ENSODEG00000007985	-	100	87.634	ENSHGLG00000013330	POLR2E	89	87.634	Heterocephalus_glaber_female
ENSODEG00000007985	-	100	87.634	ENSHGLG00100011014	POLR2E	89	87.634	Heterocephalus_glaber_male
ENSODEG00000007985	-	100	83.333	ENSHCOG00000000906	polr2eb	89	83.333	Hippocampus_comes
ENSODEG00000007985	-	59	80.357	ENSHCOG00000012099	-	88	80.357	Hippocampus_comes
ENSODEG00000007985	-	100	84.946	ENSIPUG00000019801	polr2e	89	84.946	Ictalurus_punctatus
ENSODEG00000007985	-	100	88.710	ENSSTOG00000002853	POLR2E	89	88.710	Ictidomys_tridecemlineatus
ENSODEG00000007985	-	84	78.146	ENSJJAG00000015812	-	99	78.146	Jaculus_jaculus
ENSODEG00000007985	-	100	73.184	ENSJJAG00000003145	-	86	73.184	Jaculus_jaculus
ENSODEG00000007985	-	100	87.634	ENSJJAG00000016595	-	89	87.634	Jaculus_jaculus
ENSODEG00000007985	-	100	84.946	ENSKMAG00000005954	polr2eb	89	84.946	Kryptolebias_marmoratus
ENSODEG00000007985	-	100	84.946	ENSLBEG00000024802	polr2eb	89	84.946	Labrus_bergylta
ENSODEG00000007985	-	100	85.484	ENSLACG00000013686	POLR2E	89	85.484	Latimeria_chalumnae
ENSODEG00000007985	-	87	86.420	ENSLOCG00000004599	POLR2E	100	86.420	Lepisosteus_oculatus
ENSODEG00000007985	-	100	67.553	ENSLAFG00000025587	POLR2E	89	67.553	Loxodonta_africana
ENSODEG00000007985	-	100	88.710	ENSMFAG00000002884	POLR2E	89	88.710	Macaca_fascicularis
ENSODEG00000007985	-	100	88.710	ENSMMUG00000013927	POLR2E	89	88.710	Macaca_mulatta
ENSODEG00000007985	-	94	62.712	ENSMNEG00000033452	-	95	62.712	Macaca_nemestrina
ENSODEG00000007985	-	100	88.710	ENSMNEG00000034046	-	89	88.710	Macaca_nemestrina
ENSODEG00000007985	-	91	77.160	ENSMLEG00000012405	POLR2E	81	77.160	Mandrillus_leucophaeus
ENSODEG00000007985	-	100	84.946	ENSMAMG00000018703	polr2eb	89	84.946	Mastacembelus_armatus
ENSODEG00000007985	-	100	85.484	ENSMZEG00005010796	polr2eb	94	85.484	Maylandia_zebra
ENSODEG00000007985	-	100	86.631	ENSMGAG00000003769	POLR2E	89	86.631	Meleagris_gallopavo
ENSODEG00000007985	-	100	58.602	ENSMAUG00000011003	-	86	58.602	Mesocricetus_auratus
ENSODEG00000007985	-	91	87.574	ENSMAUG00000010125	-	87	88.024	Mesocricetus_auratus
ENSODEG00000007985	-	100	88.710	ENSMICG00000013063	POLR2E	89	88.710	Microcebus_murinus
ENSODEG00000007985	-	100	87.634	ENSMOCG00000013414	Polr2e	89	87.634	Microtus_ochrogaster
ENSODEG00000007985	-	100	69.892	ENSMMOG00000001161	polr2eb	87	69.892	Mola_mola
ENSODEG00000007985	-	89	76.647	ENSMMOG00000001167	polr2eb	77	76.647	Mola_mola
ENSODEG00000007985	-	100	88.172	ENSMODG00000005494	POLR2E	89	88.172	Monodelphis_domestica
ENSODEG00000007985	-	100	85.484	ENSMALG00000021888	polr2eb	89	85.484	Monopterus_albus
ENSODEG00000007985	-	100	87.634	MGP_CAROLIEiJ_G0015561	Polr2e	89	87.634	Mus_caroli
ENSODEG00000007985	-	100	87.634	ENSMUSG00000004667	Polr2e	89	87.634	Mus_musculus
ENSODEG00000007985	-	100	87.634	MGP_PahariEiJ_G0030974	Polr2e	89	87.634	Mus_pahari
ENSODEG00000007985	-	100	87.634	MGP_SPRETEiJ_G0016379	Polr2e	89	87.634	Mus_spretus
ENSODEG00000007985	-	100	88.172	ENSMPUG00000008953	POLR2E	89	88.172	Mustela_putorius_furo
ENSODEG00000007985	-	100	88.710	ENSMLUG00000013193	POLR2E	89	88.710	Myotis_lucifugus
ENSODEG00000007985	-	73	84.058	ENSMLUG00000006376	-	100	73.457	Myotis_lucifugus
ENSODEG00000007985	-	96	73.837	ENSNGAG00000017344	-	96	73.837	Nannospalax_galili
ENSODEG00000007985	-	100	87.634	ENSNGAG00000001147	Polr2e	89	87.634	Nannospalax_galili
ENSODEG00000007985	-	100	71.505	ENSNBRG00000022772	polr2eb	87	71.505	Neolamprologus_brichardi
ENSODEG00000007985	-	99	70.787	ENSNLEG00000031364	-	88	70.787	Nomascus_leucogenys
ENSODEG00000007985	-	100	85.027	ENSNLEG00000001207	-	89	85.027	Nomascus_leucogenys
ENSODEG00000007985	-	100	78.495	ENSOPRG00000008331	POLR2E	89	78.495	Ochotona_princeps
ENSODEG00000007985	-	100	84.946	ENSONIG00000002519	polr2eb	89	84.946	Oreochromis_niloticus
ENSODEG00000007985	-	100	85.484	ENSORLG00000015346	polr2eb	89	85.484	Oryzias_latipes
ENSODEG00000007985	-	100	85.484	ENSORLG00020020700	polr2e	89	85.484	Oryzias_latipes_hni
ENSODEG00000007985	-	100	85.484	ENSORLG00015016842	polr2e	89	85.484	Oryzias_latipes_hsok
ENSODEG00000007985	-	100	84.946	ENSOMEG00000002709	polr2eb	89	84.946	Oryzias_melastigma
ENSODEG00000007985	-	100	88.710	ENSOGAG00000012311	POLR2E	89	88.710	Otolemur_garnettii
ENSODEG00000007985	-	100	88.710	ENSOARG00000010994	POLR2E	89	88.710	Ovis_aries
ENSODEG00000007985	-	89	89.222	ENSPPAG00000003145	POLR2E	87	89.222	Pan_paniscus
ENSODEG00000007985	-	100	88.172	ENSPPRG00000000777	POLR2E	89	88.172	Panthera_pardus
ENSODEG00000007985	-	81	84.211	ENSPTIG00000012237	POLR2E	98	84.211	Panthera_tigris_altaica
ENSODEG00000007985	-	100	88.710	ENSPTRG00000010183	POLR2E	89	88.710	Pan_troglodytes
ENSODEG00000007985	-	100	88.710	ENSPANG00000018011	POLR2E	89	88.710	Papio_anubis
ENSODEG00000007985	-	100	83.871	ENSPKIG00000009607	POLR2E	89	83.871	Paramormyrops_kingsleyae
ENSODEG00000007985	-	100	83.871	ENSPKIG00000024123	POLR2E	89	83.871	Paramormyrops_kingsleyae
ENSODEG00000007985	-	99	83.696	ENSPSIG00000002870	POLR2E	88	83.696	Pelodiscus_sinensis
ENSODEG00000007985	-	100	70.968	ENSPMGG00000014354	polr2eb	87	70.968	Periophthalmus_magnuspinnatus
ENSODEG00000007985	-	100	87.634	ENSPEMG00000023261	Polr2e	89	87.634	Peromyscus_maniculatus_bairdii
ENSODEG00000007985	-	100	88.172	ENSPCIG00000007312	POLR2E	74	88.172	Phascolarctos_cinereus
ENSODEG00000007985	-	100	85.484	ENSPFOG00000005734	polr2eb	89	85.484	Poecilia_formosa
ENSODEG00000007985	-	100	85.484	ENSPLAG00000014496	polr2eb	89	85.484	Poecilia_latipinna
ENSODEG00000007985	-	100	85.484	ENSPMEG00000008053	polr2eb	89	85.484	Poecilia_mexicana
ENSODEG00000007985	-	100	85.484	ENSPREG00000006489	polr2eb	89	85.484	Poecilia_reticulata
ENSODEG00000007985	-	100	80.214	ENSPPYG00000009305	POLR2E	89	80.214	Pongo_abelii
ENSODEG00000007985	-	56	87.963	ENSPCAG00000016605	POLR2E	97	87.963	Procavia_capensis
ENSODEG00000007985	-	100	88.710	ENSPCOG00000014491	POLR2E	89	88.710	Propithecus_coquereli
ENSODEG00000007985	-	61	85.345	ENSPVAG00000007718	-	55	85.345	Pteropus_vampyrus
ENSODEG00000007985	-	100	85.484	ENSPNYG00000019797	polr2eb	94	85.484	Pundamilia_nyererei
ENSODEG00000007985	-	100	84.946	ENSPNAG00000026263	POLR2E	89	84.946	Pygocentrus_nattereri
ENSODEG00000007985	-	100	87.634	ENSRNOG00000013545	Polr2e	89	87.634	Rattus_norvegicus
ENSODEG00000007985	-	100	88.710	ENSRBIG00000028726	-	89	88.710	Rhinopithecus_bieti
ENSODEG00000007985	-	100	68.984	ENSRBIG00000027259	-	90	68.984	Rhinopithecus_bieti
ENSODEG00000007985	-	100	88.710	ENSRROG00000043763	POLR2E	89	88.710	Rhinopithecus_roxellana
ENSODEG00000007985	-	99	38.743	YBR154C	RPB5	87	38.743	Saccharomyces_cerevisiae
ENSODEG00000007985	-	100	88.710	ENSSBOG00000027241	POLR2E	89	88.710	Saimiri_boliviensis_boliviensis
ENSODEG00000007985	-	100	88.172	ENSSHAG00000010690	POLR2E	89	88.172	Sarcophilus_harrisii
ENSODEG00000007985	-	100	84.946	ENSSFOG00015006073	polr2e	89	84.946	Scleropages_formosus
ENSODEG00000007985	-	100	84.946	ENSSMAG00000012782	polr2eb	89	84.946	Scophthalmus_maximus
ENSODEG00000007985	-	100	84.946	ENSSDUG00000003352	polr2eb	89	84.946	Seriola_dumerili
ENSODEG00000007985	-	100	84.946	ENSSLDG00000004965	polr2eb	89	84.946	Seriola_lalandi_dorsalis
ENSODEG00000007985	-	100	86.559	ENSSPUG00000006114	POLR2E	89	86.559	Sphenodon_punctatus
ENSODEG00000007985	-	100	84.946	ENSSPAG00000017556	polr2eb	89	84.946	Stegastes_partitus
ENSODEG00000007985	-	100	88.710	ENSSSCG00000021472	POLR2E	89	88.710	Sus_scrofa
ENSODEG00000007985	-	74	77.857	ENSTGUG00000000922	POLR2E	99	77.857	Taeniopygia_guttata
ENSODEG00000007985	-	95	80.791	ENSTRUG00000018238	polr2eb	87	70.968	Takifugu_rubripes
ENSODEG00000007985	-	100	84.946	ENSTNIG00000013187	polr2eb	89	84.946	Tetraodon_nigroviridis
ENSODEG00000007985	-	100	88.172	ENSTTRG00000001484	POLR2E	89	88.172	Tursiops_truncatus
ENSODEG00000007985	-	100	88.172	ENSUAMG00000009166	POLR2E	87	74.194	Ursus_americanus
ENSODEG00000007985	-	100	86.022	ENSXETG00000003291	polr2e	89	86.022	Xenopus_tropicalis
ENSODEG00000007985	-	100	71.505	ENSXCOG00000009197	polr2eb	87	71.505	Xiphophorus_couchianus
ENSODEG00000007985	-	100	85.484	ENSXMAG00000026495	polr2eb	89	85.484	Xiphophorus_maculatus