EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000008020 (Gene tree)
Gene ID: 101584817
Gene Symbol: SFSWAP
Alias: -
Full Name: splicing factor SWAP
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 65013 bases
Position: chrJH651591.1:987740-1052752
Accession: 101584817
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000010767	DRY_EERY	PF09750.9	2e-32	1	1
ENSODEP00000010766	DRY_EERY	PF09750.9	2e-32	1	1
ENSODEP00000010767	Surp	PF01805.20	4.7e-27	1	2
ENSODEP00000010767	Surp	PF01805.20	4.7e-27	2	2
ENSODEP00000010766	Surp	PF01805.20	4.8e-27	1	2
ENSODEP00000010766	Surp	PF01805.20	4.8e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000010920	SFSWAP-201	2859	-	ENSODEP00000010766	952 (aa)	-	-
ENSODET00000010921	SFSWAP-202	2847	XM_004635849	ENSODEP00000010767	948 (aa)	XP_004635906	UPI0003337492

Gene Model

Click here to download ENSODEG00000008020's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000008020's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000008020	SFSWAP	100	90.431	ENSG00000061936	SFSWAP	100	90.852	Homo_sapiens
ENSODEG00000008020	SFSWAP	73	58.864	ENSAPOG00000005784	sfswap	92	65.588	Acanthochromis_polyacanthus
ENSODEG00000008020	SFSWAP	100	85.338	ENSAMEG00000013818	SFSWAP	100	84.072	Ailuropoda_melanoleuca
ENSODEG00000008020	SFSWAP	74	58.345	ENSAPEG00000004965	sfswap	97	52.367	Amphiprion_percula
ENSODEG00000008020	SFSWAP	78	79.545	ENSATEG00000021053	sfswap	92	63.930	Anabas_testudineus
ENSODEG00000008020	SFSWAP	100	90.632	ENSANAG00000001518	SFSWAP	100	89.579	Aotus_nancymaae
ENSODEG00000008020	SFSWAP	100	88.819	ENSBTAG00000000439	SFSWAP	100	88.819	Bos_taurus
ENSODEG00000008020	SFSWAP	100	90.516	ENSCJAG00000003613	SFSWAP	100	89.673	Callithrix_jacchus
ENSODEG00000008020	SFSWAP	100	88.080	ENSCAFG00000006625	SFSWAP	100	87.869	Canis_familiaris
ENSODEG00000008020	SFSWAP	87	81.242	ENSCAFG00020011254	SFSWAP	99	78.064	Canis_lupus_dingo
ENSODEG00000008020	SFSWAP	100	88.924	ENSCHIG00000008838	SFSWAP	100	88.924	Capra_hircus
ENSODEG00000008020	SFSWAP	100	90.928	ENSTSYG00000010303	SFSWAP	100	90.928	Carlito_syrichta
ENSODEG00000008020	SFSWAP	92	94.755	ENSCAPG00000004394	SFSWAP	96	93.843	Cavia_aperea
ENSODEG00000008020	SFSWAP	100	95.364	ENSCPOG00000005280	SFSWAP	100	94.521	Cavia_porcellus
ENSODEG00000008020	SFSWAP	100	89.989	ENSCCAG00000037255	SFSWAP	100	89.568	Cebus_capucinus
ENSODEG00000008020	SFSWAP	100	91.561	ENSCATG00000031094	SFSWAP	100	91.561	Cercocebus_atys
ENSODEG00000008020	SFSWAP	100	96.941	ENSCLAG00000008380	SFSWAP	100	96.941	Chinchilla_lanigera
ENSODEG00000008020	SFSWAP	100	91.456	ENSCSAG00000001884	SFSWAP	100	91.456	Chlorocebus_sabaeus
ENSODEG00000008020	SFSWAP	92	73.690	ENSCHOG00000003578	SFSWAP	100	73.690	Choloepus_hoffmanni
ENSODEG00000008020	SFSWAP	100	91.456	ENSCANG00000036501	SFSWAP	100	91.456	Colobus_angolensis_palliatus
ENSODEG00000008020	SFSWAP	100	91.034	ENSCGRG00001011284	Sfswap	100	91.034	Cricetulus_griseus_chok1gshd
ENSODEG00000008020	SFSWAP	100	91.034	ENSCGRG00000017417	Sfswap	100	91.034	Cricetulus_griseus_crigri
ENSODEG00000008020	SFSWAP	98	56.181	ENSDARG00000005980	sfswap	99	54.842	Danio_rerio
ENSODEG00000008020	SFSWAP	85	88.169	ENSDNOG00000018742	SFSWAP	100	87.045	Dasypus_novemcinctus
ENSODEG00000008020	SFSWAP	97	83.551	ENSDORG00000010352	Sfswap	99	83.769	Dipodomys_ordii
ENSODEG00000008020	SFSWAP	52	44.922	FBgn0003638	su(w[a])	56	55.556	Drosophila_melanogaster
ENSODEG00000008020	SFSWAP	86	70.115	ENSETEG00000016657	-	91	70.034	Echinops_telfairi
ENSODEG00000008020	SFSWAP	84	38.644	ENSEBUG00000016748	SFSWAP	93	43.709	Eptatretus_burgeri
ENSODEG00000008020	SFSWAP	100	89.451	ENSEASG00005016502	SFSWAP	100	89.451	Equus_asinus_asinus
ENSODEG00000008020	SFSWAP	98	89.213	ENSECAG00000007657	SFSWAP	99	89.213	Equus_caballus
ENSODEG00000008020	SFSWAP	86	72.127	ENSEEUG00000001713	SFSWAP	83	89.071	Erinaceus_europaeus
ENSODEG00000008020	SFSWAP	100	51.962	ENSELUG00000010942	sfswap	89	64.234	Esox_lucius
ENSODEG00000008020	SFSWAP	100	87.975	ENSFCAG00000010778	SFSWAP	100	87.764	Felis_catus
ENSODEG00000008020	SFSWAP	100	94.958	ENSFDAG00000017235	SFSWAP	100	93.908	Fukomys_damarensis
ENSODEG00000008020	SFSWAP	79	70.588	ENSGACG00000017647	sfswap	54	49.414	Gasterosteus_aculeatus
ENSODEG00000008020	SFSWAP	100	90.852	ENSGGOG00000014877	SFSWAP	100	91.167	Gorilla_gorilla
ENSODEG00000008020	SFSWAP	75	58.401	ENSHBUG00000005629	sfswap	91	64.631	Haplochromis_burtoni
ENSODEG00000008020	SFSWAP	100	95.148	ENSHGLG00000019216	SFSWAP	100	95.148	Heterocephalus_glaber_female
ENSODEG00000008020	SFSWAP	100	94.726	ENSHGLG00100019350	SFSWAP	100	94.726	Heterocephalus_glaber_male
ENSODEG00000008020	SFSWAP	74	56.545	ENSHCOG00000009475	sfswap	97	51.685	Hippocampus_comes
ENSODEG00000008020	SFSWAP	98	54.721	ENSIPUG00000010598	sfswap	99	53.036	Ictalurus_punctatus
ENSODEG00000008020	SFSWAP	100	91.149	ENSSTOG00000000773	SFSWAP	100	90.938	Ictidomys_tridecemlineatus
ENSODEG00000008020	SFSWAP	100	90.084	ENSJJAG00000006609	Sfswap	100	90.401	Jaculus_jaculus
ENSODEG00000008020	SFSWAP	75	55.764	ENSKMAG00000013168	sfswap	94	62.469	Kryptolebias_marmoratus
ENSODEG00000008020	SFSWAP	92	69.598	ENSLOCG00000006202	sfswap	99	60.059	Lepisosteus_oculatus
ENSODEG00000008020	SFSWAP	92	87.130	ENSLAFG00000014462	SFSWAP	100	87.472	Loxodonta_africana
ENSODEG00000008020	SFSWAP	98	91.262	ENSMFAG00000037352	SFSWAP	85	91.262	Macaca_fascicularis
ENSODEG00000008020	SFSWAP	100	91.350	ENSMMUG00000020343	SFSWAP	100	91.350	Macaca_mulatta
ENSODEG00000008020	SFSWAP	100	91.350	ENSMNEG00000041002	SFSWAP	100	91.350	Macaca_nemestrina
ENSODEG00000008020	SFSWAP	100	89.557	ENSMLEG00000035728	SFSWAP	100	89.451	Mandrillus_leucophaeus
ENSODEG00000008020	SFSWAP	100	91.043	ENSMICG00000004465	SFSWAP	100	91.149	Microcebus_murinus
ENSODEG00000008020	SFSWAP	100	89.873	ENSMOCG00000014390	Sfswap	100	89.873	Microtus_ochrogaster
ENSODEG00000008020	SFSWAP	100	90.084	MGP_CAROLIEiJ_G0027780	Sfswap	100	90.084	Mus_caroli
ENSODEG00000008020	SFSWAP	100	89.979	ENSMUSG00000029439	Sfswap	100	89.979	Mus_musculus
ENSODEG00000008020	SFSWAP	100	89.800	MGP_PahariEiJ_G0024360	Sfswap	94	96.491	Mus_pahari
ENSODEG00000008020	SFSWAP	100	89.979	MGP_SPRETEiJ_G0028779	Sfswap	100	89.979	Mus_spretus
ENSODEG00000008020	SFSWAP	100	87.131	ENSMPUG00000002218	SFSWAP	100	87.025	Mustela_putorius_furo
ENSODEG00000008020	SFSWAP	89	80.290	ENSMLUG00000011296	SFSWAP	100	79.287	Myotis_lucifugus
ENSODEG00000008020	SFSWAP	100	89.873	ENSNGAG00000018167	Sfswap	100	89.662	Nannospalax_galili
ENSODEG00000008020	SFSWAP	100	88.947	ENSNLEG00000008386	SFSWAP	100	88.947	Nomascus_leucogenys
ENSODEG00000008020	SFSWAP	71	85.870	ENSMEUG00000009556	-	79	85.870	Notamacropus_eugenii
ENSODEG00000008020	SFSWAP	95	86.029	ENSOPRG00000006983	-	100	73.081	Ochotona_princeps
ENSODEG00000008020	SFSWAP	96	52.573	ENSONIG00000003757	sfswap	53	67.027	Oreochromis_niloticus
ENSODEG00000008020	SFSWAP	92	82.005	ENSOANG00000013861	SFSWAP	100	83.371	Ornithorhynchus_anatinus
ENSODEG00000008020	SFSWAP	100	86.260	ENSOCUG00000002165	SFSWAP	100	85.537	Oryctolagus_cuniculus
ENSODEG00000008020	SFSWAP	89	90.555	ENSOGAG00000016724	SFSWAP	99	90.555	Otolemur_garnettii
ENSODEG00000008020	SFSWAP	100	88.421	ENSOARG00000014314	SFSWAP	100	88.421	Ovis_aries
ENSODEG00000008020	SFSWAP	100	90.747	ENSPPAG00000036706	SFSWAP	100	91.062	Pan_paniscus
ENSODEG00000008020	SFSWAP	99	76.017	ENSPTIG00000004304	SFSWAP	51	75.527	Panthera_tigris_altaica
ENSODEG00000008020	SFSWAP	100	90.852	ENSPTRG00000005640	SFSWAP	100	91.167	Pan_troglodytes
ENSODEG00000008020	SFSWAP	100	91.561	ENSPANG00000019737	SFSWAP	100	91.561	Papio_anubis
ENSODEG00000008020	SFSWAP	61	62.736	ENSPSIG00000017807	SFSWAP	100	66.981	Pelodiscus_sinensis
ENSODEG00000008020	SFSWAP	100	89.884	ENSPEMG00000001237	Sfswap	100	89.884	Peromyscus_maniculatus_bairdii
ENSODEG00000008020	SFSWAP	99	78.452	ENSPCIG00000006062	SFSWAP	53	86.029	Phascolarctos_cinereus
ENSODEG00000008020	SFSWAP	75	58.992	ENSPLAG00000008513	sfswap	91	62.103	Poecilia_latipinna
ENSODEG00000008020	SFSWAP	75	58.447	ENSPREG00000006692	sfswap	92	64.058	Poecilia_reticulata
ENSODEG00000008020	SFSWAP	98	90.675	ENSPPYG00000005129	SFSWAP	100	90.890	Pongo_abelii
ENSODEG00000008020	SFSWAP	58	85.853	ENSPCAG00000004977	-	65	86.628	Procavia_capensis
ENSODEG00000008020	SFSWAP	100	91.878	ENSPCOG00000023786	SFSWAP	100	91.878	Propithecus_coquereli
ENSODEG00000008020	SFSWAP	92	87.108	ENSPVAG00000014918	SFSWAP	92	85.889	Pteropus_vampyrus
ENSODEG00000008020	SFSWAP	75	57.859	ENSPNYG00000012660	sfswap	58	64.377	Pundamilia_nyererei
ENSODEG00000008020	SFSWAP	100	87.342	ENSRNOG00000000931	Sfswap	100	87.131	Rattus_norvegicus
ENSODEG00000008020	SFSWAP	100	84.388	ENSRBIG00000036330	SFSWAP	94	90.465	Rhinopithecus_bieti
ENSODEG00000008020	SFSWAP	100	91.034	ENSRROG00000032001	SFSWAP	100	91.034	Rhinopithecus_roxellana
ENSODEG00000008020	SFSWAP	100	90.411	ENSSBOG00000026217	SFSWAP	100	90.301	Saimiri_boliviensis_boliviensis
ENSODEG00000008020	SFSWAP	92	81.130	ENSSHAG00000014232	SFSWAP	100	81.356	Sarcophilus_harrisii
ENSODEG00000008020	SFSWAP	96	57.712	ENSSFOG00015000766	sfswap	50	55.854	Scleropages_formosus
ENSODEG00000008020	SFSWAP	71	60.969	ENSSLDG00000010835	sfswap	58	64.339	Seriola_lalandi_dorsalis
ENSODEG00000008020	SFSWAP	79	84.466	ENSSARG00000000424	SFSWAP	85	84.466	Sorex_araneus
ENSODEG00000008020	SFSWAP	87	74.101	ENSSPUG00000010272	SFSWAP	99	75.271	Sphenodon_punctatus
ENSODEG00000008020	SFSWAP	74	59.508	ENSSPAG00000014310	sfswap	57	67.914	Stegastes_partitus
ENSODEG00000008020	SFSWAP	100	89.158	ENSSSCG00000009744	SFSWAP	100	88.947	Sus_scrofa
ENSODEG00000008020	SFSWAP	54	90.625	ENSTBEG00000004983	-	64	90.625	Tupaia_belangeri
ENSODEG00000008020	SFSWAP	100	79.600	ENSTTRG00000013478	SFSWAP	93	91.627	Tursiops_truncatus
ENSODEG00000008020	SFSWAP	100	86.287	ENSUAMG00000016807	SFSWAP	100	86.392	Ursus_americanus
ENSODEG00000008020	SFSWAP	90	81.850	ENSUMAG00000002957	SFSWAP	91	87.601	Ursus_maritimus
ENSODEG00000008020	SFSWAP	56	91.473	ENSVPAG00000010479	-	65	91.057	Vicugna_pacos
ENSODEG00000008020	SFSWAP	100	88.291	ENSVVUG00000010753	SFSWAP	100	86.709	Vulpes_vulpes
ENSODEG00000008020	SFSWAP	97	60.282	ENSXETG00000009350	sfswap	94	65.978	Xenopus_tropicalis