EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000008047 (Gene tree)
Gene ID: 101589840
Gene Symbol: PNLDC1
Alias: FLJ40240|dJ195P10.2
Full Name: PARN like%2C ribonuclease domain containing 1
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 21235 bases
Position: chrJH651627.1:5025319-5046553
Accession: 101589840
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000010800	CAF1	PF04857.20	1.1e-76	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000010954	PNLDC1-201	1596	XM_004639533	ENSODEP00000010800	531 (aa)	XP_023555052	UPI000C9F2315

Gene Model

Click here to download ENSODEG00000008047's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000008047's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000008047	PNLDC1	99	83.932	ENSG00000146453	PNLDC1	99	83.932	Homo_sapiens
ENSODEG00000008047	PNLDC1	99	83.523	ENSAMEG00000015371	PNLDC1	99	83.523	Ailuropoda_melanoleuca
ENSODEG00000008047	PNLDC1	96	59.339	ENSAPLG00000007014	PNLDC1	98	59.339	Anas_platyrhynchos
ENSODEG00000008047	PNLDC1	99	58.679	ENSACAG00000013667	PNLDC1	99	58.679	Anolis_carolinensis
ENSODEG00000008047	PNLDC1	100	82.674	ENSANAG00000034713	PNLDC1	100	83.170	Aotus_nancymaae
ENSODEG00000008047	PNLDC1	95	84.692	ENSBTAG00000015166	PNLDC1	95	84.692	Bos_taurus
ENSODEG00000008047	PNLDC1	100	82.674	ENSCJAG00000011865	PNLDC1	100	82.674	Callithrix_jacchus
ENSODEG00000008047	PNLDC1	100	85.122	ENSCAFG00000000740	PNLDC1	100	85.122	Canis_familiaris
ENSODEG00000008047	PNLDC1	100	82.364	ENSCAFG00020017742	PNLDC1	100	82.364	Canis_lupus_dingo
ENSODEG00000008047	PNLDC1	100	82.331	ENSCHIG00000003141	PNLDC1	100	82.331	Capra_hircus
ENSODEG00000008047	PNLDC1	100	81.733	ENSTSYG00000005606	PNLDC1	100	81.733	Carlito_syrichta
ENSODEG00000008047	PNLDC1	100	70.056	ENSCAPG00000011893	PNLDC1	100	70.056	Cavia_aperea
ENSODEG00000008047	PNLDC1	100	87.030	ENSCPOG00000019565	PNLDC1	100	87.030	Cavia_porcellus
ENSODEG00000008047	PNLDC1	100	82.863	ENSCCAG00000026232	PNLDC1	100	82.863	Cebus_capucinus
ENSODEG00000008047	PNLDC1	100	84.181	ENSCATG00000033196	PNLDC1	100	84.181	Cercocebus_atys
ENSODEG00000008047	PNLDC1	99	93.573	ENSCLAG00000003228	PNLDC1	99	93.573	Chinchilla_lanigera
ENSODEG00000008047	PNLDC1	95	82.908	ENSCSAG00000012478	PNLDC1	98	82.908	Chlorocebus_sabaeus
ENSODEG00000008047	PNLDC1	96	65.234	ENSCPBG00000004050	PNLDC1	100	65.234	Chrysemys_picta_bellii
ENSODEG00000008047	PNLDC1	95	83.992	ENSCANG00000043076	PNLDC1	97	83.992	Colobus_angolensis_palliatus
ENSODEG00000008047	PNLDC1	100	64.783	ENSCGRG00001011981	-	99	64.783	Cricetulus_griseus_chok1gshd
ENSODEG00000008047	PNLDC1	100	80.603	ENSCGRG00001007470	-	99	80.603	Cricetulus_griseus_chok1gshd
ENSODEG00000008047	PNLDC1	100	67.232	ENSCGRG00000003103	-	99	67.232	Cricetulus_griseus_crigri
ENSODEG00000008047	PNLDC1	100	80.603	ENSCGRG00000010221	-	99	80.603	Cricetulus_griseus_crigri
ENSODEG00000008047	PNLDC1	100	81.015	ENSDNOG00000013709	PNLDC1	100	81.015	Dasypus_novemcinctus
ENSODEG00000008047	PNLDC1	100	79.026	ENSDORG00000011517	Pnldc1	99	86.262	Dipodomys_ordii
ENSODEG00000008047	PNLDC1	93	72.211	ENSETEG00000007587	PNLDC1	99	72.211	Echinops_telfairi
ENSODEG00000008047	PNLDC1	100	78.131	ENSEASG00005019029	PNLDC1	100	78.131	Equus_asinus_asinus
ENSODEG00000008047	PNLDC1	100	84.746	ENSECAG00000012898	PNLDC1	100	84.746	Equus_caballus
ENSODEG00000008047	PNLDC1	67	81.250	ENSEEUG00000005717	-	86	81.250	Erinaceus_europaeus
ENSODEG00000008047	PNLDC1	100	85.122	ENSFCAG00000002848	PNLDC1	100	85.122	Felis_catus
ENSODEG00000008047	PNLDC1	95	58.498	ENSFALG00000012081	PNLDC1	99	58.498	Ficedula_albicollis
ENSODEG00000008047	PNLDC1	100	94.162	ENSFDAG00000021334	PNLDC1	100	94.162	Fukomys_damarensis
ENSODEG00000008047	PNLDC1	79	58.907	ENSGALG00000011624	PNLDC1	82	58.907	Gallus_gallus
ENSODEG00000008047	PNLDC1	99	65.660	ENSGAGG00000015276	PNLDC1	100	66.736	Gopherus_agassizii
ENSODEG00000008047	PNLDC1	100	83.616	ENSGGOG00000014077	PNLDC1	100	83.616	Gorilla_gorilla
ENSODEG00000008047	PNLDC1	100	95.480	ENSHGLG00000006889	PNLDC1	100	95.480	Heterocephalus_glaber_female
ENSODEG00000008047	PNLDC1	100	95.480	ENSHGLG00100018275	PNLDC1	100	95.480	Heterocephalus_glaber_male
ENSODEG00000008047	PNLDC1	99	87.925	ENSSTOG00000005595	PNLDC1	99	87.925	Ictidomys_tridecemlineatus
ENSODEG00000008047	PNLDC1	99	78.937	ENSJJAG00000009937	Pnldc1	99	78.937	Jaculus_jaculus
ENSODEG00000008047	PNLDC1	59	81.270	ENSLAFG00000030189	PNLDC1	92	81.270	Loxodonta_africana
ENSODEG00000008047	PNLDC1	100	83.804	ENSMFAG00000041296	PNLDC1	100	83.804	Macaca_fascicularis
ENSODEG00000008047	PNLDC1	100	83.804	ENSMMUG00000004181	PNLDC1	100	83.804	Macaca_mulatta
ENSODEG00000008047	PNLDC1	100	83.616	ENSMNEG00000034271	PNLDC1	100	83.616	Macaca_nemestrina
ENSODEG00000008047	PNLDC1	100	81.356	ENSMLEG00000044059	PNLDC1	100	81.356	Mandrillus_leucophaeus
ENSODEG00000008047	PNLDC1	95	58.858	ENSMGAG00000012470	PNLDC1	97	58.858	Meleagris_gallopavo
ENSODEG00000008047	PNLDC1	99	65.038	ENSMAUG00000012298	Pnldc1	100	65.038	Mesocricetus_auratus
ENSODEG00000008047	PNLDC1	100	82.863	ENSMICG00000008021	PNLDC1	100	82.863	Microcebus_murinus
ENSODEG00000008047	PNLDC1	100	85.178	ENSMOCG00000014287	Pnldc1	100	85.178	Microtus_ochrogaster
ENSODEG00000008047	PNLDC1	99	73.724	ENSMODG00000007420	PNLDC1	99	73.724	Monodelphis_domestica
ENSODEG00000008047	PNLDC1	100	86.064	MGP_CAROLIEiJ_G0021045	Pnldc1	100	86.064	Mus_caroli
ENSODEG00000008047	PNLDC1	100	87.006	ENSMUSG00000073460	Pnldc1	100	88.889	Mus_musculus
ENSODEG00000008047	PNLDC1	100	86.629	MGP_PahariEiJ_G0023361	Pnldc1	100	86.629	Mus_pahari
ENSODEG00000008047	PNLDC1	100	86.629	MGP_SPRETEiJ_G0021975	Pnldc1	100	86.629	Mus_spretus
ENSODEG00000008047	PNLDC1	99	84.659	ENSMPUG00000004920	PNLDC1	99	84.659	Mustela_putorius_furo
ENSODEG00000008047	PNLDC1	100	83.616	ENSMLUG00000000747	PNLDC1	100	83.616	Myotis_lucifugus
ENSODEG00000008047	PNLDC1	100	86.252	ENSNGAG00000017714	Pnldc1	99	86.252	Nannospalax_galili
ENSODEG00000008047	PNLDC1	95	82.643	ENSNLEG00000011282	PNLDC1	98	82.643	Nomascus_leucogenys
ENSODEG00000008047	PNLDC1	54	62.500	ENSMEUG00000014042	-	100	62.500	Notamacropus_eugenii
ENSODEG00000008047	PNLDC1	60	60.938	ENSMEUG00000011926	-	64	60.938	Notamacropus_eugenii
ENSODEG00000008047	PNLDC1	79	82.086	ENSOPRG00000003813	PNLDC1	79	82.086	Ochotona_princeps
ENSODEG00000008047	PNLDC1	99	56.038	ENSOANG00000012199	PNLDC1	99	58.679	Ornithorhynchus_anatinus
ENSODEG00000008047	PNLDC1	100	84.181	ENSOCUG00000013867	PNLDC1	100	84.181	Oryctolagus_cuniculus
ENSODEG00000008047	PNLDC1	99	84.688	ENSOGAG00000007331	PNLDC1	100	84.688	Otolemur_garnettii
ENSODEG00000008047	PNLDC1	100	82.486	ENSOARG00000004585	PNLDC1	100	82.486	Ovis_aries
ENSODEG00000008047	PNLDC1	100	82.863	ENSPPAG00000026651	PNLDC1	100	82.863	Pan_paniscus
ENSODEG00000008047	PNLDC1	100	84.746	ENSPPRG00000012854	PNLDC1	100	84.746	Panthera_pardus
ENSODEG00000008047	PNLDC1	99	80.303	ENSPTIG00000011501	PNLDC1	99	80.303	Panthera_tigris_altaica
ENSODEG00000008047	PNLDC1	100	82.863	ENSPTRG00000018762	PNLDC1	100	82.863	Pan_troglodytes
ENSODEG00000008047	PNLDC1	100	83.992	ENSPANG00000022009	PNLDC1	100	83.992	Papio_anubis
ENSODEG00000008047	PNLDC1	100	86.064	ENSPEMG00000016301	Pnldc1	99	86.064	Peromyscus_maniculatus_bairdii
ENSODEG00000008047	PNLDC1	83	75.626	ENSPCIG00000023412	PNLDC1	100	75.626	Phascolarctos_cinereus
ENSODEG00000008047	PNLDC1	100	78.383	ENSPPYG00000017148	PNLDC1	100	78.383	Pongo_abelii
ENSODEG00000008047	PNLDC1	99	72.917	ENSPCAG00000014169	PNLDC1	99	72.917	Procavia_capensis
ENSODEG00000008047	PNLDC1	100	83.427	ENSPCOG00000025722	PNLDC1	100	83.427	Propithecus_coquereli
ENSODEG00000008047	PNLDC1	73	86.753	ENSPVAG00000005325	PNLDC1	73	86.753	Pteropus_vampyrus
ENSODEG00000008047	PNLDC1	100	85.876	ENSRNOG00000023140	Pnldc1	100	88.125	Rattus_norvegicus
ENSODEG00000008047	PNLDC1	100	83.992	ENSRBIG00000033806	PNLDC1	100	83.992	Rhinopithecus_bieti
ENSODEG00000008047	PNLDC1	95	84.387	ENSRROG00000043919	PNLDC1	97	84.387	Rhinopithecus_roxellana
ENSODEG00000008047	PNLDC1	100	83.239	ENSSBOG00000019135	PNLDC1	100	83.239	Saimiri_boliviensis_boliviensis
ENSODEG00000008047	PNLDC1	95	75.050	ENSSHAG00000015192	PNLDC1	97	75.050	Sarcophilus_harrisii
ENSODEG00000008047	PNLDC1	54	64.685	ENSSPUG00000004627	PNLDC1	100	64.602	Sphenodon_punctatus
ENSODEG00000008047	PNLDC1	96	82.549	ENSSSCG00000004046	PNLDC1	99	82.549	Sus_scrofa
ENSODEG00000008047	PNLDC1	92	59.016	ENSTGUG00000011418	PNLDC1	99	59.016	Taeniopygia_guttata
ENSODEG00000008047	PNLDC1	96	73.725	ENSTBEG00000009131	PNLDC1	98	73.725	Tupaia_belangeri
ENSODEG00000008047	PNLDC1	73	79.534	ENSTTRG00000010409	PNLDC1	73	79.534	Tursiops_truncatus
ENSODEG00000008047	PNLDC1	99	71.695	ENSUAMG00000015783	PNLDC1	99	71.695	Ursus_americanus
ENSODEG00000008047	PNLDC1	95	76.712	ENSUMAG00000011903	PNLDC1	99	76.712	Ursus_maritimus
ENSODEG00000008047	PNLDC1	96	85.910	ENSVVUG00000006586	PNLDC1	99	84.600	Vulpes_vulpes