EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000008077 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 613 bases
Position: chrJH651601.1:6148558-6149170
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000010835	LSM	PF01423.22	3.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000010990	-	228	-	ENSODEP00000010835	75 (aa)	-	-

Gene Model

Click here to download ENSODEG00000008077's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000008077's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000008077	-	84	95.238	ENSODEG00000012799	-	51	95.238
ENSODEG00000008077	-	83	96.774	ENSODEG00000020139	-	53	96.774
ENSODEG00000008077	-	83	93.548	ENSODEG00000020094	-	53	93.548
ENSODEG00000008077	-	83	93.548	ENSODEG00000020096	-	53	93.548
ENSODEG00000008077	-	83	95.161	ENSODEG00000019447	-	53	95.161
ENSODEG00000008077	-	83	96.774	ENSODEG00000008857	-	53	96.774
ENSODEG00000008077	-	83	95.161	ENSODEG00000011751	-	68	82.192

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000008077	-	95	90.141	ENSG00000125743	SNRPD2	91	90.141	Homo_sapiens
ENSODEG00000008077	-	83	95.161	ENSAPOG00000012310	snrpd2	55	95.161	Acanthochromis_polyacanthus
ENSODEG00000008077	-	81	96.721	ENSAMEG00000000818	-	52	96.721	Ailuropoda_melanoleuca
ENSODEG00000008077	-	83	95.161	ENSAOCG00000024413	snrpd2	53	95.161	Amphiprion_ocellaris
ENSODEG00000008077	-	83	95.161	ENSAPEG00000021711	snrpd2	53	95.161	Amphiprion_percula
ENSODEG00000008077	-	81	95.082	ENSATEG00000000868	snrpd2	51	95.082	Anabas_testudineus
ENSODEG00000008077	-	81	96.721	ENSACAG00000016779	-	52	96.721	Anolis_carolinensis
ENSODEG00000008077	-	81	95.082	ENSANAG00000001612	-	51	95.082	Aotus_nancymaae
ENSODEG00000008077	-	83	93.548	ENSANAG00000003063	-	53	93.548	Aotus_nancymaae
ENSODEG00000008077	-	83	93.548	ENSANAG00000018193	-	53	93.548	Aotus_nancymaae
ENSODEG00000008077	-	83	93.548	ENSANAG00000017079	-	53	93.548	Aotus_nancymaae
ENSODEG00000008077	-	83	95.161	ENSACLG00000001746	snrpd2	53	95.161	Astatotilapia_calliptera
ENSODEG00000008077	-	83	96.774	ENSAMXG00000033526	snrpd2	53	96.774	Astyanax_mexicanus
ENSODEG00000008077	-	83	96.774	ENSBTAG00000012177	SNRPD2	53	96.774	Bos_taurus
ENSODEG00000008077	-	83	75.806	WBGene00004917	snr-4	53	75.806	Caenorhabditis_elegans
ENSODEG00000008077	-	83	93.548	ENSCJAG00000047147	-	53	93.548	Callithrix_jacchus
ENSODEG00000008077	-	83	95.161	ENSCJAG00000041687	-	53	95.161	Callithrix_jacchus
ENSODEG00000008077	-	83	96.774	ENSCJAG00000044723	-	53	96.774	Callithrix_jacchus
ENSODEG00000008077	-	83	96.774	ENSCJAG00000019291	-	53	96.774	Callithrix_jacchus
ENSODEG00000008077	-	83	95.161	ENSCJAG00000047157	-	53	95.161	Callithrix_jacchus
ENSODEG00000008077	-	83	95.161	ENSCJAG00000044646	-	53	95.161	Callithrix_jacchus
ENSODEG00000008077	-	83	96.774	ENSCJAG00000012413	-	53	96.774	Callithrix_jacchus
ENSODEG00000008077	-	85	89.062	ENSCAFG00000000634	-	52	91.935	Canis_familiaris
ENSODEG00000008077	-	83	96.774	ENSCAFG00000004403	SNRPD2	53	96.774	Canis_familiaris
ENSODEG00000008077	-	85	89.062	ENSCAFG00020002921	-	52	91.935	Canis_lupus_dingo
ENSODEG00000008077	-	81	95.082	ENSCHIG00000015755	-	51	95.082	Capra_hircus
ENSODEG00000008077	-	83	87.097	ENSTSYG00000031156	-	54	87.097	Carlito_syrichta
ENSODEG00000008077	-	83	96.774	ENSTSYG00000011207	-	53	96.774	Carlito_syrichta
ENSODEG00000008077	-	83	90.323	ENSCAPG00000006559	-	53	90.323	Cavia_aperea
ENSODEG00000008077	-	81	96.721	ENSCAPG00000011695	-	51	96.721	Cavia_aperea
ENSODEG00000008077	-	83	82.258	ENSCPOG00000025735	-	50	82.258	Cavia_porcellus
ENSODEG00000008077	-	83	96.774	ENSCPOG00000035154	-	53	96.774	Cavia_porcellus
ENSODEG00000008077	-	85	68.750	ENSCCAG00000020956	-	52	70.968	Cebus_capucinus
ENSODEG00000008077	-	83	95.161	ENSCCAG00000011183	-	53	95.161	Cebus_capucinus
ENSODEG00000008077	-	83	91.935	ENSCCAG00000012011	-	53	91.935	Cebus_capucinus
ENSODEG00000008077	-	83	96.774	ENSCCAG00000035396	SNRPD2	53	96.774	Cebus_capucinus
ENSODEG00000008077	-	83	96.774	ENSCATG00000040410	-	100	89.552	Cercocebus_atys
ENSODEG00000008077	-	83	96.774	ENSCATG00000005272	-	53	96.774	Cercocebus_atys
ENSODEG00000008077	-	83	96.774	ENSCATG00000031591	-	53	96.774	Cercocebus_atys
ENSODEG00000008077	-	88	69.697	ENSCLAG00000001183	-	50	74.194	Chinchilla_lanigera
ENSODEG00000008077	-	83	96.774	ENSCLAG00000000931	-	53	96.774	Chinchilla_lanigera
ENSODEG00000008077	-	83	96.774	ENSCSAG00000003157	SNRPD2	53	96.774	Chlorocebus_sabaeus
ENSODEG00000008077	-	83	96.774	ENSCPBG00000007259	SNRPD2	53	96.774	Chrysemys_picta_bellii
ENSODEG00000008077	-	83	75.806	ENSCING00000020031	-	53	75.806	Ciona_intestinalis
ENSODEG00000008077	-	83	77.419	ENSCSAVG00000003527	-	50	77.419	Ciona_savignyi
ENSODEG00000008077	-	83	96.774	ENSCANG00000038535	-	53	96.774	Colobus_angolensis_palliatus
ENSODEG00000008077	-	83	70.968	ENSCANG00000035956	-	50	70.968	Colobus_angolensis_palliatus
ENSODEG00000008077	-	81	96.721	ENSCGRG00000011635	-	52	96.721	Cricetulus_griseus_crigri
ENSODEG00000008077	-	83	95.161	ENSCSEG00000002230	snrpd2	53	95.161	Cynoglossus_semilaevis
ENSODEG00000008077	-	83	95.161	ENSCVAG00000014834	snrpd2	53	95.161	Cyprinodon_variegatus
ENSODEG00000008077	-	81	95.082	ENSCVAG00000010204	SNRPD2	50	95.082	Cyprinodon_variegatus
ENSODEG00000008077	-	83	96.774	ENSDARG00000040440	snrpd2	53	96.774	Danio_rerio
ENSODEG00000008077	-	83	96.774	ENSDORG00000001729	Snrpd2	53	96.774	Dipodomys_ordii
ENSODEG00000008077	-	79	88.136	FBgn0261789	SmD2	50	88.136	Drosophila_melanogaster
ENSODEG00000008077	-	81	96.721	ENSETEG00000002893	-	55	96.721	Echinops_telfairi
ENSODEG00000008077	-	81	90.164	ENSEBUG00000002144	snrpd2	51	90.164	Eptatretus_burgeri
ENSODEG00000008077	-	83	96.774	ENSEASG00005014210	-	53	96.774	Equus_asinus_asinus
ENSODEG00000008077	-	83	96.774	ENSFCAG00000022530	-	53	96.774	Felis_catus
ENSODEG00000008077	-	83	96.774	ENSFDAG00000015792	SNRPD2	53	96.774	Fukomys_damarensis
ENSODEG00000008077	-	83	95.161	ENSFHEG00000015591	snrpd2	53	95.161	Fundulus_heteroclitus
ENSODEG00000008077	-	81	95.082	ENSGMOG00000013857	snrpd2	52	95.082	Gadus_morhua
ENSODEG00000008077	-	83	95.161	ENSGAFG00000001246	snrpd2	53	95.161	Gambusia_affinis
ENSODEG00000008077	-	81	93.443	ENSGACG00000006697	snrpd2	52	93.443	Gasterosteus_aculeatus
ENSODEG00000008077	-	83	96.774	ENSGGOG00000002350	SNRPD2	53	96.774	Gorilla_gorilla
ENSODEG00000008077	-	83	95.161	ENSHBUG00000004073	snrpd2	53	95.161	Haplochromis_burtoni
ENSODEG00000008077	-	83	96.774	ENSHGLG00000015364	SNRPD2	53	96.774	Heterocephalus_glaber_female
ENSODEG00000008077	-	83	96.774	ENSHGLG00100015694	SNRPD2	53	96.774	Heterocephalus_glaber_male
ENSODEG00000008077	-	83	93.548	ENSHCOG00000010973	snrpd2	53	93.548	Hippocampus_comes
ENSODEG00000008077	-	83	96.774	ENSIPUG00000001053	snrpd2	53	96.774	Ictalurus_punctatus
ENSODEG00000008077	-	83	96.774	ENSSTOG00000024377	SNRPD2	53	96.774	Ictidomys_tridecemlineatus
ENSODEG00000008077	-	83	96.774	ENSJJAG00000002622	Snrpd2	53	96.774	Jaculus_jaculus
ENSODEG00000008077	-	83	95.161	ENSKMAG00000001539	snrpd2	53	95.161	Kryptolebias_marmoratus
ENSODEG00000008077	-	83	95.161	ENSLBEG00000019436	snrpd2	53	95.161	Labrus_bergylta
ENSODEG00000008077	-	83	96.774	ENSLOCG00000014824	snrpd2	53	96.774	Lepisosteus_oculatus
ENSODEG00000008077	-	81	96.721	ENSLAFG00000004205	-	52	96.721	Loxodonta_africana
ENSODEG00000008077	-	83	96.774	ENSMFAG00000045767	-	53	96.774	Macaca_fascicularis
ENSODEG00000008077	-	83	91.935	ENSMFAG00000009957	-	53	91.935	Macaca_fascicularis
ENSODEG00000008077	-	83	96.774	ENSMFAG00000020148	-	53	96.774	Macaca_fascicularis
ENSODEG00000008077	-	83	91.935	ENSMMUG00000032525	-	53	91.935	Macaca_mulatta
ENSODEG00000008077	-	83	96.774	ENSMMUG00000032370	-	53	96.774	Macaca_mulatta
ENSODEG00000008077	-	83	90.323	ENSMMUG00000030518	-	53	90.323	Macaca_mulatta
ENSODEG00000008077	-	83	96.774	ENSMNEG00000021599	-	53	96.774	Macaca_nemestrina
ENSODEG00000008077	-	83	91.935	ENSMNEG00000010649	-	53	91.935	Macaca_nemestrina
ENSODEG00000008077	-	81	95.082	ENSMLEG00000008325	-	52	95.082	Mandrillus_leucophaeus
ENSODEG00000008077	-	83	95.161	ENSMAMG00000013925	snrpd2	53	95.161	Mastacembelus_armatus
ENSODEG00000008077	-	83	95.161	ENSMZEG00005013054	snrpd2	53	95.161	Maylandia_zebra
ENSODEG00000008077	-	83	96.774	ENSMAUG00000018849	Snrpd2	53	96.774	Mesocricetus_auratus
ENSODEG00000008077	-	83	96.774	ENSMICG00000031545	SNRPD2	53	96.774	Microcebus_murinus
ENSODEG00000008077	-	83	88.710	ENSMOCG00000017135	-	52	88.710	Microtus_ochrogaster
ENSODEG00000008077	-	83	96.774	ENSMOCG00000017080	Snrpd2	53	96.774	Microtus_ochrogaster
ENSODEG00000008077	-	83	95.161	ENSMMOG00000004936	snrpd2	53	95.161	Mola_mola
ENSODEG00000008077	-	81	96.721	ENSMODG00000021539	-	52	96.721	Monodelphis_domestica
ENSODEG00000008077	-	83	95.161	ENSMALG00000010608	snrpd2	53	95.161	Monopterus_albus
ENSODEG00000008077	-	85	89.062	MGP_CAROLIEiJ_G0018529	-	53	91.935	Mus_caroli
ENSODEG00000008077	-	83	96.774	MGP_CAROLIEiJ_G0029275	-	53	96.774	Mus_caroli
ENSODEG00000008077	-	83	96.774	ENSMUSG00000040824	Snrpd2	53	96.774	Mus_musculus
ENSODEG00000008077	-	83	96.774	MGP_PahariEiJ_G0021135	-	53	96.774	Mus_pahari
ENSODEG00000008077	-	85	90.625	MGP_SPRETEiJ_G0019409	-	53	93.548	Mus_spretus
ENSODEG00000008077	-	83	96.774	MGP_SPRETEiJ_G0030359	Snrpd2	53	96.774	Mus_spretus
ENSODEG00000008077	-	81	96.721	ENSMPUG00000005733	-	50	96.721	Mustela_putorius_furo
ENSODEG00000008077	-	81	83.607	ENSMLUG00000026025	-	51	83.607	Myotis_lucifugus
ENSODEG00000008077	-	83	91.935	ENSMLUG00000025417	-	53	91.935	Myotis_lucifugus
ENSODEG00000008077	-	81	96.721	ENSMLUG00000001306	-	52	96.721	Myotis_lucifugus
ENSODEG00000008077	-	83	95.161	ENSMLUG00000026353	-	51	95.161	Myotis_lucifugus
ENSODEG00000008077	-	80	85.000	ENSMLUG00000030461	-	51	85.000	Myotis_lucifugus
ENSODEG00000008077	-	83	96.774	ENSNGAG00000010411	-	53	96.774	Nannospalax_galili
ENSODEG00000008077	-	83	95.161	ENSNBRG00000000805	snrpd2	53	95.161	Neolamprologus_brichardi
ENSODEG00000008077	-	83	96.774	ENSNLEG00000002274	SNRPD2	53	96.774	Nomascus_leucogenys
ENSODEG00000008077	-	81	96.721	ENSMEUG00000012031	-	52	96.721	Notamacropus_eugenii
ENSODEG00000008077	-	83	95.161	ENSOPRG00000008321	-	53	95.161	Ochotona_princeps
ENSODEG00000008077	-	83	95.161	ENSONIG00000005406	snrpd2	53	95.161	Oreochromis_niloticus
ENSODEG00000008077	-	81	96.721	ENSOANG00000000813	-	50	96.721	Ornithorhynchus_anatinus
ENSODEG00000008077	-	83	96.774	ENSOCUG00000022402	SNRPD2	53	96.774	Oryctolagus_cuniculus
ENSODEG00000008077	-	83	95.161	ENSORLG00000026725	snrpd2	53	95.161	Oryzias_latipes
ENSODEG00000008077	-	83	95.161	ENSORLG00020011312	snrpd2	53	95.161	Oryzias_latipes_hni
ENSODEG00000008077	-	83	95.161	ENSORLG00015019579	snrpd2	53	95.161	Oryzias_latipes_hsok
ENSODEG00000008077	-	83	95.161	ENSOMEG00000012661	snrpd2	53	95.161	Oryzias_melastigma
ENSODEG00000008077	-	81	96.721	ENSOGAG00000030128	-	52	96.721	Otolemur_garnettii
ENSODEG00000008077	-	81	96.721	ENSOARG00000010203	-	52	96.721	Ovis_aries
ENSODEG00000008077	-	83	91.935	ENSOARG00000016742	-	53	91.935	Ovis_aries
ENSODEG00000008077	-	83	96.774	ENSPPAG00000038031	SNRPD2	53	96.774	Pan_paniscus
ENSODEG00000008077	-	83	85.484	ENSPPRG00000000040	-	51	85.484	Panthera_pardus
ENSODEG00000008077	-	83	96.774	ENSPPRG00000012309	SNRPD2	53	96.774	Panthera_pardus
ENSODEG00000008077	-	83	85.484	ENSPTIG00000000935	-	65	85.484	Panthera_tigris_altaica
ENSODEG00000008077	-	83	96.774	ENSPTRG00000011162	SNRPD2	53	96.774	Pan_troglodytes
ENSODEG00000008077	-	83	96.774	ENSPANG00000017743	-	53	96.774	Papio_anubis
ENSODEG00000008077	-	83	96.774	ENSPANG00000008802	-	53	96.774	Papio_anubis
ENSODEG00000008077	-	83	96.774	ENSPKIG00000001110	snrpd2	53	96.774	Paramormyrops_kingsleyae
ENSODEG00000008077	-	79	94.915	ENSPMGG00000016148	snrpd2	51	94.915	Periophthalmus_magnuspinnatus
ENSODEG00000008077	-	83	88.710	ENSPEMG00000009398	-	53	88.710	Peromyscus_maniculatus_bairdii
ENSODEG00000008077	-	81	96.721	ENSPEMG00000004117	-	51	96.721	Peromyscus_maniculatus_bairdii
ENSODEG00000008077	-	83	96.774	ENSPCIG00000022986	SNRPD2	53	96.774	Phascolarctos_cinereus
ENSODEG00000008077	-	83	95.161	ENSPFOG00000016809	snrpd2	53	95.161	Poecilia_formosa
ENSODEG00000008077	-	83	95.161	ENSPLAG00000010725	snrpd2	53	95.161	Poecilia_latipinna
ENSODEG00000008077	-	83	95.161	ENSPMEG00000000107	snrpd2	53	95.161	Poecilia_mexicana
ENSODEG00000008077	-	83	96.774	ENSPPYG00000010129	SNRPD2	53	96.774	Pongo_abelii
ENSODEG00000008077	-	83	96.774	ENSPCAG00000016818	SNRPD2	53	96.774	Procavia_capensis
ENSODEG00000008077	-	83	96.774	ENSPCOG00000001429	-	53	96.774	Propithecus_coquereli
ENSODEG00000008077	-	83	96.774	ENSPCOG00000028811	-	53	96.774	Propithecus_coquereli
ENSODEG00000008077	-	81	96.721	ENSPVAG00000001345	-	52	96.721	Pteropus_vampyrus
ENSODEG00000008077	-	83	95.161	ENSPNYG00000011826	snrpd2	53	95.161	Pundamilia_nyererei
ENSODEG00000008077	-	83	96.774	ENSPNAG00000025554	snrpd2	53	96.774	Pygocentrus_nattereri
ENSODEG00000008077	-	83	95.161	ENSRNOG00000048758	Snrpd2l	53	95.161	Rattus_norvegicus
ENSODEG00000008077	-	83	96.774	ENSRNOG00000015844	Snrpd2	53	96.774	Rattus_norvegicus
ENSODEG00000008077	-	83	88.710	ENSRBIG00000032742	-	56	88.710	Rhinopithecus_bieti
ENSODEG00000008077	-	83	96.774	ENSRBIG00000040969	SNRPD2	53	96.774	Rhinopithecus_bieti
ENSODEG00000008077	-	99	84.211	ENSRBIG00000032406	-	94	84.211	Rhinopithecus_bieti
ENSODEG00000008077	-	83	96.774	ENSRROG00000034764	SNRPD2	53	96.774	Rhinopithecus_roxellana
ENSODEG00000008077	-	99	84.211	ENSRROG00000030974	-	94	84.211	Rhinopithecus_roxellana
ENSODEG00000008077	-	80	45.000	YLR275W	SMD2	55	45.000	Saccharomyces_cerevisiae
ENSODEG00000008077	-	83	96.774	ENSSBOG00000017764	-	53	96.774	Saimiri_boliviensis_boliviensis
ENSODEG00000008077	-	83	96.774	ENSSBOG00000009827	-	53	96.774	Saimiri_boliviensis_boliviensis
ENSODEG00000008077	-	83	96.774	ENSSBOG00000035164	-	53	96.774	Saimiri_boliviensis_boliviensis
ENSODEG00000008077	-	81	96.721	ENSSHAG00000003772	-	52	96.721	Sarcophilus_harrisii
ENSODEG00000008077	-	83	96.774	ENSSFOG00015016069	-	53	96.774	Scleropages_formosus
ENSODEG00000008077	-	83	96.774	ENSSFOG00015022535	snrpd2	53	96.774	Scleropages_formosus
ENSODEG00000008077	-	83	93.548	ENSSMAG00000003422	snrpd2	53	93.548	Scophthalmus_maximus
ENSODEG00000008077	-	83	95.161	ENSSDUG00000005519	snrpd2	53	95.161	Seriola_dumerili
ENSODEG00000008077	-	83	95.161	ENSSLDG00000009397	snrpd2	53	95.161	Seriola_lalandi_dorsalis
ENSODEG00000008077	-	81	96.721	ENSSARG00000009167	-	52	96.721	Sorex_araneus
ENSODEG00000008077	-	83	95.161	ENSSPAG00000015767	snrpd2	53	95.161	Stegastes_partitus
ENSODEG00000008077	-	83	96.774	ENSSSCG00000033500	SNRPD2	53	96.774	Sus_scrofa
ENSODEG00000008077	-	83	72.581	ENSSSCG00000040417	-	61	69.355	Sus_scrofa
ENSODEG00000008077	-	83	93.548	ENSTRUG00000023014	snrpd2	53	93.548	Takifugu_rubripes
ENSODEG00000008077	-	83	95.161	ENSTNIG00000011736	snrpd2	57	95.161	Tetraodon_nigroviridis
ENSODEG00000008077	-	83	96.774	ENSTBEG00000001752	SNRPD2	53	96.774	Tupaia_belangeri
ENSODEG00000008077	-	83	96.774	ENSTTRG00000014299	-	53	96.774	Tursiops_truncatus
ENSODEG00000008077	-	85	70.312	ENSUAMG00000022454	-	52	70.312	Ursus_americanus
ENSODEG00000008077	-	83	96.774	ENSUAMG00000023173	SNRPD2	53	96.774	Ursus_americanus
ENSODEG00000008077	-	83	96.774	ENSUMAG00000023685	-	53	96.774	Ursus_maritimus
ENSODEG00000008077	-	85	70.312	ENSUMAG00000001547	-	52	70.312	Ursus_maritimus
ENSODEG00000008077	-	85	87.500	ENSVVUG00000016748	-	52	90.323	Vulpes_vulpes
ENSODEG00000008077	-	81	96.721	ENSXETG00000002173	snrpd2	52	96.721	Xenopus_tropicalis
ENSODEG00000008077	-	83	95.161	ENSXMAG00000001018	snrpd2	53	95.161	Xiphophorus_maculatus