EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000008079 (Gene tree)
Gene ID: 101575561
Gene Symbol: PDCD11
Alias: -
Full Name: programmed cell death 11
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 42168 bases
Position: chrJH651557.1:3086795-3128962
Accession: 101575561
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000010837	Suf	PF05843.14	6.8e-13	1	1
ENSODEP00000010837	S1	PF00575.23	7.9e-77	1	5
ENSODEP00000010837	S1	PF00575.23	7.9e-77	2	5
ENSODEP00000010837	S1	PF00575.23	7.9e-77	3	5
ENSODEP00000010837	S1	PF00575.23	7.9e-77	4	5
ENSODEP00000010837	S1	PF00575.23	7.9e-77	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000010992	PDCD11-201	5619	XM_004631574	ENSODEP00000010837	1872 (aa)	-	-

Gene Model

Click here to download ENSODEG00000008079's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000008079's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000008079	PDCD11	99	80.021	ENSG00000148843	PDCD11	100	80.021	Homo_sapiens
ENSODEG00000008079	PDCD11	99	43.182	ENSAPOG00000015629	pdcd11	99	43.046	Acanthochromis_polyacanthus
ENSODEG00000008079	PDCD11	99	78.909	ENSAMEG00000017935	PDCD11	99	79.241	Ailuropoda_melanoleuca
ENSODEG00000008079	PDCD11	99	43.280	ENSAOCG00000015287	pdcd11	99	43.303	Amphiprion_ocellaris
ENSODEG00000008079	PDCD11	53	41.575	ENSAPEG00000020240	pdcd11	96	41.575	Amphiprion_percula
ENSODEG00000008079	PDCD11	99	43.305	ENSATEG00000021043	pdcd11	99	43.494	Anabas_testudineus
ENSODEG00000008079	PDCD11	99	54.334	ENSAPLG00000010301	PDCD11	99	54.334	Anas_platyrhynchos
ENSODEG00000008079	PDCD11	99	54.040	ENSACAG00000004796	PDCD11	99	54.040	Anolis_carolinensis
ENSODEG00000008079	PDCD11	99	80.011	ENSANAG00000034576	PDCD11	100	80.011	Aotus_nancymaae
ENSODEG00000008079	PDCD11	88	64.626	ENSACLG00000018236	pdcd11	99	58.790	Astatotilapia_calliptera
ENSODEG00000008079	PDCD11	97	40.522	ENSAMXG00000005458	pdcd11	99	40.828	Astyanax_mexicanus
ENSODEG00000008079	PDCD11	99	76.514	ENSBTAG00000009715	PDCD11	100	76.899	Bos_taurus
ENSODEG00000008079	PDCD11	99	79.420	ENSCJAG00000018257	PDCD11	100	79.894	Callithrix_jacchus
ENSODEG00000008079	PDCD11	99	79.123	ENSCAFG00000010411	PDCD11	100	79.123	Canis_familiaris
ENSODEG00000008079	PDCD11	99	79.489	ENSCAFG00020010369	PDCD11	100	79.424	Canis_lupus_dingo
ENSODEG00000008079	PDCD11	99	76.716	ENSCHIG00000025218	PDCD11	99	76.769	Capra_hircus
ENSODEG00000008079	PDCD11	98	74.891	ENSTSYG00000033423	PDCD11	100	74.891	Carlito_syrichta
ENSODEG00000008079	PDCD11	91	75.596	ENSCAPG00000005386	PDCD11	99	75.596	Cavia_aperea
ENSODEG00000008079	PDCD11	99	83.607	ENSCPOG00000010957	PDCD11	99	85.045	Cavia_porcellus
ENSODEG00000008079	PDCD11	99	80.265	ENSCCAG00000018950	PDCD11	100	80.265	Cebus_capucinus
ENSODEG00000008079	PDCD11	99	80.623	ENSCATG00000044331	PDCD11	100	80.623	Cercocebus_atys
ENSODEG00000008079	PDCD11	99	86.919	ENSCLAG00000001029	PDCD11	99	86.919	Chinchilla_lanigera
ENSODEG00000008079	PDCD11	99	80.655	ENSCSAG00000005346	PDCD11	100	80.655	Chlorocebus_sabaeus
ENSODEG00000008079	PDCD11	81	92.248	ENSCHOG00000004796	PDCD11	89	92.248	Choloepus_hoffmanni
ENSODEG00000008079	PDCD11	90	70.170	ENSCPBG00000024487	PDCD11	99	71.307	Chrysemys_picta_bellii
ENSODEG00000008079	PDCD11	99	80.201	ENSCANG00000043300	PDCD11	100	80.603	Colobus_angolensis_palliatus
ENSODEG00000008079	PDCD11	99	77.525	ENSCGRG00001006458	Pdcd11	100	77.525	Cricetulus_griseus_chok1gshd
ENSODEG00000008079	PDCD11	99	77.472	ENSCGRG00000003583	Pdcd11	100	77.472	Cricetulus_griseus_crigri
ENSODEG00000008079	PDCD11	97	42.663	ENSCSEG00000010739	pdcd11	99	42.927	Cynoglossus_semilaevis
ENSODEG00000008079	PDCD11	78	62.353	ENSCVAG00000018903	pdcd11	98	48.137	Cyprinodon_variegatus
ENSODEG00000008079	PDCD11	99	42.078	ENSDARG00000052480	pdcd11	99	42.782	Danio_rerio
ENSODEG00000008079	PDCD11	99	77.239	ENSDNOG00000013838	PDCD11	100	77.345	Dasypus_novemcinctus
ENSODEG00000008079	PDCD11	99	78.564	ENSDORG00000010420	Pdcd11	100	78.978	Dipodomys_ordii
ENSODEG00000008079	PDCD11	69	37.695	FBgn0039182	CG5728	62	37.217	Drosophila_melanogaster
ENSODEG00000008079	PDCD11	95	67.969	ENSETEG00000000813	PDCD11	100	67.746	Echinops_telfairi
ENSODEG00000008079	PDCD11	67	50.831	ENSEBUG00000002358	-	94	50.831	Eptatretus_burgeri
ENSODEG00000008079	PDCD11	96	80.398	ENSEASG00005015159	PDCD11	100	80.618	Equus_asinus_asinus
ENSODEG00000008079	PDCD11	99	80.676	ENSECAG00000020507	PDCD11	100	80.729	Equus_caballus
ENSODEG00000008079	PDCD11	98	83.000	ENSEEUG00000009245	PDCD11	91	83.000	Erinaceus_europaeus
ENSODEG00000008079	PDCD11	99	44.515	ENSELUG00000004211	pdcd11	99	44.403	Esox_lucius
ENSODEG00000008079	PDCD11	99	79.631	ENSFCAG00000002384	PDCD11	99	79.631	Felis_catus
ENSODEG00000008079	PDCD11	99	54.120	ENSFALG00000008775	PDCD11	99	54.652	Ficedula_albicollis
ENSODEG00000008079	PDCD11	99	82.655	ENSFDAG00000009532	PDCD11	100	82.496	Fukomys_damarensis
ENSODEG00000008079	PDCD11	88	66.327	ENSFHEG00000022997	pdcd11	95	66.327	Fundulus_heteroclitus
ENSODEG00000008079	PDCD11	92	43.220	ENSGMOG00000004186	pdcd11	93	43.468	Gadus_morhua
ENSODEG00000008079	PDCD11	76	52.338	ENSGALG00000008265	PDCD11	99	51.340	Gallus_gallus
ENSODEG00000008079	PDCD11	99	43.143	ENSGAFG00000012806	pdcd11	99	43.061	Gambusia_affinis
ENSODEG00000008079	PDCD11	99	43.701	ENSGACG00000018233	pdcd11	95	58.333	Gasterosteus_aculeatus
ENSODEG00000008079	PDCD11	95	57.778	ENSGAGG00000024314	PDCD11	99	57.778	Gopherus_agassizii
ENSODEG00000008079	PDCD11	99	80.180	ENSGGOG00000011621	PDCD11	100	80.180	Gorilla_gorilla
ENSODEG00000008079	PDCD11	99	43.397	ENSHBUG00000020226	pdcd11	99	43.663	Haplochromis_burtoni
ENSODEG00000008079	PDCD11	99	83.369	ENSHGLG00000001462	PDCD11	100	83.369	Heterocephalus_glaber_female
ENSODEG00000008079	PDCD11	99	82.574	ENSHGLG00100018779	PDCD11	100	82.574	Heterocephalus_glaber_male
ENSODEG00000008079	PDCD11	99	42.322	ENSHCOG00000016006	pdcd11	99	42.375	Hippocampus_comes
ENSODEG00000008079	PDCD11	62	40.017	ENSIPUG00000015102	pdcd11	99	41.056	Ictalurus_punctatus
ENSODEG00000008079	PDCD11	99	81.290	ENSSTOG00000014553	PDCD11	100	81.290	Ictidomys_tridecemlineatus
ENSODEG00000008079	PDCD11	99	79.301	ENSJJAG00000015523	Pdcd11	100	79.638	Jaculus_jaculus
ENSODEG00000008079	PDCD11	99	48.044	ENSLOCG00000011818	pdcd11	99	48.254	Lepisosteus_oculatus
ENSODEG00000008079	PDCD11	99	78.701	ENSLAFG00000008398	PDCD11	100	78.488	Loxodonta_africana
ENSODEG00000008079	PDCD11	99	80.306	ENSMFAG00000044058	PDCD11	100	80.814	Macaca_fascicularis
ENSODEG00000008079	PDCD11	99	80.306	ENSMMUG00000007058	PDCD11	100	80.814	Macaca_mulatta
ENSODEG00000008079	PDCD11	99	80.412	ENSMNEG00000040726	PDCD11	99	80.920	Macaca_nemestrina
ENSODEG00000008079	PDCD11	99	79.979	ENSMLEG00000040978	PDCD11	100	79.979	Mandrillus_leucophaeus
ENSODEG00000008079	PDCD11	99	42.956	ENSMAMG00000009572	pdcd11	99	43.310	Mastacembelus_armatus
ENSODEG00000008079	PDCD11	99	43.291	ENSMZEG00005008949	pdcd11	99	43.640	Maylandia_zebra
ENSODEG00000008079	PDCD11	99	53.407	ENSMGAG00000010482	PDCD11	99	53.624	Meleagris_gallopavo
ENSODEG00000008079	PDCD11	96	76.677	ENSMAUG00000014924	Pdcd11	99	76.677	Mesocricetus_auratus
ENSODEG00000008079	PDCD11	99	80.985	ENSMICG00000012421	PDCD11	100	81.038	Microcebus_murinus
ENSODEG00000008079	PDCD11	99	76.846	ENSMOCG00000021792	Pdcd11	100	76.846	Microtus_ochrogaster
ENSODEG00000008079	PDCD11	99	39.163	ENSMMOG00000007572	pdcd11	99	39.057	Mola_mola
ENSODEG00000008079	PDCD11	99	61.117	ENSMODG00000011077	PDCD11	99	61.404	Monodelphis_domestica
ENSODEG00000008079	PDCD11	83	55.685	ENSMALG00000003859	pdcd11	98	45.494	Monopterus_albus
ENSODEG00000008079	PDCD11	99	75.822	MGP_CAROLIEiJ_G0023050	Pdcd11	100	75.769	Mus_caroli
ENSODEG00000008079	PDCD11	99	75.742	ENSMUSG00000025047	Pdcd11	100	75.689	Mus_musculus
ENSODEG00000008079	PDCD11	99	75.846	MGP_PahariEiJ_G0014540	Pdcd11	100	75.951	Mus_pahari
ENSODEG00000008079	PDCD11	99	75.769	MGP_SPRETEiJ_G0023971	Pdcd11	100	75.716	Mus_spretus
ENSODEG00000008079	PDCD11	99	78.858	ENSMPUG00000016829	PDCD11	100	79.070	Mustela_putorius_furo
ENSODEG00000008079	PDCD11	99	79.452	ENSMLUG00000004997	PDCD11	100	80.032	Myotis_lucifugus
ENSODEG00000008079	PDCD11	99	79.493	ENSNGAG00000018143	Pdcd11	100	79.598	Nannospalax_galili
ENSODEG00000008079	PDCD11	85	56.325	ENSNBRG00000021596	pdcd11	99	53.977	Neolamprologus_brichardi
ENSODEG00000008079	PDCD11	99	76.943	ENSNLEG00000026700	PDCD11	100	76.996	Nomascus_leucogenys
ENSODEG00000008079	PDCD11	71	77.130	ENSMEUG00000013719	-	70	77.130	Notamacropus_eugenii
ENSODEG00000008079	PDCD11	99	75.159	ENSOPRG00000010593	PDCD11	100	75.159	Ochotona_princeps
ENSODEG00000008079	PDCD11	99	43.450	ENSONIG00000018835	pdcd11	99	43.770	Oreochromis_niloticus
ENSODEG00000008079	PDCD11	99	58.179	ENSOANG00000001636	-	99	58.126	Ornithorhynchus_anatinus
ENSODEG00000008079	PDCD11	99	80.158	ENSOCUG00000006312	PDCD11	100	80.317	Oryctolagus_cuniculus
ENSODEG00000008079	PDCD11	99	43.485	ENSORLG00020003642	pdcd11	99	43.425	Oryzias_latipes_hni
ENSODEG00000008079	PDCD11	99	43.379	ENSORLG00015001618	pdcd11	99	43.372	Oryzias_latipes_hsok
ENSODEG00000008079	PDCD11	74	43.800	ENSOMEG00000010904	pdcd11	98	43.594	Oryzias_melastigma
ENSODEG00000008079	PDCD11	99	79.230	ENSOGAG00000008683	PDCD11	100	79.230	Otolemur_garnettii
ENSODEG00000008079	PDCD11	99	76.700	ENSOARG00000003719	PDCD11	99	76.769	Ovis_aries
ENSODEG00000008079	PDCD11	99	77.402	ENSPPAG00000024593	PDCD11	100	77.402	Pan_paniscus
ENSODEG00000008079	PDCD11	99	79.725	ENSPPRG00000015133	PDCD11	99	79.725	Panthera_pardus
ENSODEG00000008079	PDCD11	99	79.631	ENSPTIG00000011433	PDCD11	99	79.631	Panthera_tigris_altaica
ENSODEG00000008079	PDCD11	99	80.127	ENSPTRG00000002911	PDCD11	100	80.127	Pan_troglodytes
ENSODEG00000008079	PDCD11	99	80.814	ENSPANG00000020959	PDCD11	100	80.814	Papio_anubis
ENSODEG00000008079	PDCD11	99	45.144	ENSPKIG00000000973	pdcd11	99	45.328	Paramormyrops_kingsleyae
ENSODEG00000008079	PDCD11	78	55.943	ENSPSIG00000005102	PDCD11	95	55.943	Pelodiscus_sinensis
ENSODEG00000008079	PDCD11	65	61.812	ENSPMGG00000007289	pdcd11	90	62.752	Periophthalmus_magnuspinnatus
ENSODEG00000008079	PDCD11	99	77.496	ENSPEMG00000010315	Pdcd11	100	77.655	Peromyscus_maniculatus_bairdii
ENSODEG00000008079	PDCD11	99	42.097	ENSPMAG00000003098	pdcd11	99	42.201	Petromyzon_marinus
ENSODEG00000008079	PDCD11	99	64.808	ENSPCIG00000001118	PDCD11	99	64.789	Phascolarctos_cinereus
ENSODEG00000008079	PDCD11	99	43.737	ENSPFOG00000006012	pdcd11	99	43.760	Poecilia_formosa
ENSODEG00000008079	PDCD11	97	47.067	ENSPLAG00000014494	pdcd11	99	46.705	Poecilia_latipinna
ENSODEG00000008079	PDCD11	90	54.310	ENSPMEG00000018177	pdcd11	97	52.542	Poecilia_mexicana
ENSODEG00000008079	PDCD11	99	43.717	ENSPREG00000000475	pdcd11	99	43.687	Poecilia_reticulata
ENSODEG00000008079	PDCD11	99	77.833	ENSPPYG00000002621	PDCD11	100	77.833	Pongo_abelii
ENSODEG00000008079	PDCD11	73	72.222	ENSPCAG00000011663	PDCD11	74	72.222	Procavia_capensis
ENSODEG00000008079	PDCD11	99	76.080	ENSPCOG00000023327	PDCD11	100	76.343	Propithecus_coquereli
ENSODEG00000008079	PDCD11	99	78.575	ENSPVAG00000004176	PDCD11	100	78.481	Pteropus_vampyrus
ENSODEG00000008079	PDCD11	99	43.397	ENSPNYG00000003979	pdcd11	99	43.663	Pundamilia_nyererei
ENSODEG00000008079	PDCD11	95	44.618	ENSPNAG00000017225	pdcd11	99	45.100	Pygocentrus_nattereri
ENSODEG00000008079	PDCD11	99	75.303	ENSRNOG00000020304	Pdcd11	99	75.897	Rattus_norvegicus
ENSODEG00000008079	PDCD11	99	80.253	ENSRBIG00000011889	PDCD11	100	80.708	Rhinopithecus_bieti
ENSODEG00000008079	PDCD11	99	80.253	ENSRROG00000030483	PDCD11	100	80.708	Rhinopithecus_roxellana
ENSODEG00000008079	PDCD11	84	48.175	YMR229C	-	94	42.151	Saccharomyces_cerevisiae
ENSODEG00000008079	PDCD11	99	81.214	ENSSBOG00000030308	PDCD11	100	81.214	Saimiri_boliviensis_boliviensis
ENSODEG00000008079	PDCD11	99	64.108	ENSSHAG00000018258	PDCD11	99	63.920	Sarcophilus_harrisii
ENSODEG00000008079	PDCD11	99	44.798	ENSSFOG00015003881	pdcd11	99	44.745	Scleropages_formosus
ENSODEG00000008079	PDCD11	99	43.667	ENSSMAG00000006612	pdcd11	99	43.591	Scophthalmus_maximus
ENSODEG00000008079	PDCD11	95	47.226	ENSSDUG00000021302	pdcd11	99	46.847	Seriola_dumerili
ENSODEG00000008079	PDCD11	80	84.211	ENSSARG00000002540	PDCD11	74	84.211	Sorex_araneus
ENSODEG00000008079	PDCD11	97	41.626	ENSSPAG00000017558	pdcd11	100	42.157	Stegastes_partitus
ENSODEG00000008079	PDCD11	99	78.281	ENSSSCG00000010599	PDCD11	100	78.445	Sus_scrofa
ENSODEG00000008079	PDCD11	69	40.483	ENSTRUG00000014291	pdcd11	99	40.663	Takifugu_rubripes
ENSODEG00000008079	PDCD11	99	43.023	ENSTNIG00000012085	pdcd11	99	42.993	Tetraodon_nigroviridis
ENSODEG00000008079	PDCD11	99	74.170	ENSTBEG00000001893	PDCD11	100	74.565	Tupaia_belangeri
ENSODEG00000008079	PDCD11	99	74.341	ENSTTRG00000003356	PDCD11	99	74.394	Tursiops_truncatus
ENSODEG00000008079	PDCD11	99	79.230	ENSUAMG00000018015	PDCD11	100	79.283	Ursus_americanus
ENSODEG00000008079	PDCD11	99	77.789	ENSUMAG00000023567	PDCD11	100	77.842	Ursus_maritimus
ENSODEG00000008079	PDCD11	68	83.582	ENSVPAG00000007405	PDCD11	79	83.582	Vicugna_pacos
ENSODEG00000008079	PDCD11	99	79.123	ENSVVUG00000004457	PDCD11	100	79.070	Vulpes_vulpes
ENSODEG00000008079	PDCD11	99	48.670	ENSXETG00000009482	pdcd11	99	48.722	Xenopus_tropicalis
ENSODEG00000008079	PDCD11	99	37.764	ENSXCOG00000012420	pdcd11	99	37.836	Xiphophorus_couchianus
ENSODEG00000008079	PDCD11	99	44.074	ENSXMAG00000004638	pdcd11	99	43.922	Xiphophorus_maculatus