EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000008248 (Gene tree)
Gene ID: 101562880
Gene Symbol: PUS1
Alias: -
Full Name: pseudouridine synthase 1
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 7746 bases
Position: chrJH651591.1:928751-936496
Accession: 101562880
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000011078	PseudoU_synth_1	PF01416.20	8.2e-15	1	1
ENSODEP00000011077	PseudoU_synth_1	PF01416.20	1.1e-14	1	1
ENSODEP00000011079	PseudoU_synth_1	PF01416.20	1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000011235	PUS1-203	999	-	ENSODEP00000011079	333 (aa)	-	-
ENSODET00000011234	PUS1-202	1293	XM_004635954	ENSODEP00000011078	379 (aa)	XP_004636011	-
ENSODET00000011233	PUS1-201	1242	-	ENSODEP00000011077	413 (aa)	-	-

Gene Model

Click here to download ENSODEG00000008248's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000008248's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000008248	PUS1	98	84.169	ENSG00000177192	PUS1	99	84.169	Homo_sapiens
ENSODEG00000008248	PUS1	53	30.570	ENSG00000169972	PUSL1	63	30.570	Homo_sapiens
ENSODEG00000008248	PUS1	90	69.767	ENSAPOG00000007254	pus1	81	69.767	Acanthochromis_polyacanthus
ENSODEG00000008248	PUS1	98	82.527	ENSAMEG00000013715	PUS1	94	79.795	Ailuropoda_melanoleuca
ENSODEG00000008248	PUS1	92	67.887	ENSACIG00000009169	pus1	86	67.887	Amphilophus_citrinellus
ENSODEG00000008248	PUS1	89	71.091	ENSAOCG00000022207	pus1	81	71.091	Amphiprion_ocellaris
ENSODEG00000008248	PUS1	89	71.091	ENSAPEG00000006039	pus1	86	71.091	Amphiprion_percula
ENSODEG00000008248	PUS1	90	70.468	ENSATEG00000020688	pus1	87	70.468	Anabas_testudineus
ENSODEG00000008248	PUS1	96	73.151	ENSACAG00000007367	PUS1	98	73.151	Anolis_carolinensis
ENSODEG00000008248	PUS1	81	89.869	ENSANAG00000036192	PUS1	99	86.462	Aotus_nancymaae
ENSODEG00000008248	PUS1	89	70.294	ENSACLG00000020868	pus1	87	70.294	Astatotilapia_calliptera
ENSODEG00000008248	PUS1	85	74.074	ENSAMXG00000008710	pus1	80	70.930	Astyanax_mexicanus
ENSODEG00000008248	PUS1	100	82.005	ENSBTAG00000012990	PUS1	99	80.952	Bos_taurus
ENSODEG00000008248	PUS1	91	36.915	WBGene00004248	pus-1	86	36.915	Caenorhabditis_elegans
ENSODEG00000008248	PUS1	82	86.496	ENSCJAG00000003720	PUS1	75	86.496	Callithrix_jacchus
ENSODEG00000008248	PUS1	98	81.365	ENSCAFG00000006429	PUS1	95	81.414	Canis_familiaris
ENSODEG00000008248	PUS1	98	81.365	ENSCAFG00020010737	PUS1	88	81.414	Canis_lupus_dingo
ENSODEG00000008248	PUS1	100	82.292	ENSCHIG00000000487	PUS1	99	80.451	Capra_hircus
ENSODEG00000008248	PUS1	90	88.596	ENSTSYG00000032605	PUS1	96	86.908	Carlito_syrichta
ENSODEG00000008248	PUS1	81	96.104	ENSCAPG00000006421	PUS1	96	96.104	Cavia_aperea
ENSODEG00000008248	PUS1	96	93.151	ENSCPOG00000001027	PUS1	96	92.401	Cavia_porcellus
ENSODEG00000008248	PUS1	94	83.471	ENSCCAG00000015879	PUS1	91	86.544	Cebus_capucinus
ENSODEG00000008248	PUS1	53	30.052	ENSCATG00000018260	PUSL1	63	30.052	Cercocebus_atys
ENSODEG00000008248	PUS1	98	83.508	ENSCATG00000032870	PUS1	90	88.685	Cercocebus_atys
ENSODEG00000008248	PUS1	52	30.366	ENSCLAG00000005232	PUSL1	62	30.366	Chinchilla_lanigera
ENSODEG00000008248	PUS1	96	95.304	ENSCLAG00000011689	PUS1	96	93.093	Chinchilla_lanigera
ENSODEG00000008248	PUS1	98	84.031	ENSCSAG00000001879	PUS1	95	81.527	Chlorocebus_sabaeus
ENSODEG00000008248	PUS1	53	30.052	ENSCSAG00000000680	PUSL1	63	30.052	Chlorocebus_sabaeus
ENSODEG00000008248	PUS1	81	81.759	ENSCPBG00000024715	PUS1	87	81.759	Chrysemys_picta_bellii
ENSODEG00000008248	PUS1	89	43.323	ENSCING00000009426	-	90	43.323	Ciona_intestinalis
ENSODEG00000008248	PUS1	85	43.478	ENSCSAVG00000003751	-	66	43.887	Ciona_savignyi
ENSODEG00000008248	PUS1	98	74.803	ENSCANG00000035561	PUS1	99	72.864	Colobus_angolensis_palliatus
ENSODEG00000008248	PUS1	98	86.968	ENSCGRG00001019592	Pus1	95	86.061	Cricetulus_griseus_chok1gshd
ENSODEG00000008248	PUS1	98	86.968	ENSCGRG00000004048	Pus1	99	84.694	Cricetulus_griseus_crigri
ENSODEG00000008248	PUS1	95	65.312	ENSCSEG00000003629	pus1	85	66.387	Cynoglossus_semilaevis
ENSODEG00000008248	PUS1	91	69.364	ENSCVAG00000001265	pus1	84	69.364	Cyprinodon_variegatus
ENSODEG00000008248	PUS1	91	66.181	ENSDARG00000045562	pus1	99	66.065	Danio_rerio
ENSODEG00000008248	PUS1	97	81.250	ENSDNOG00000045576	PUS1	95	85.531	Dasypus_novemcinctus
ENSODEG00000008248	PUS1	81	92.857	ENSDORG00000011455	Pus1	99	89.164	Dipodomys_ordii
ENSODEG00000008248	PUS1	84	47.988	FBgn0038811	PUS1	82	46.647	Drosophila_melanogaster
ENSODEG00000008248	PUS1	93	80.447	ENSETEG00000019160	PUS1	95	76.546	Echinops_telfairi
ENSODEG00000008248	PUS1	95	41.514	ENSEBUG00000000368	-	69	41.514	Eptatretus_burgeri
ENSODEG00000008248	PUS1	99	83.290	ENSEASG00005016535	PUS1	90	83.290	Equus_asinus_asinus
ENSODEG00000008248	PUS1	96	86.022	ENSECAG00000006965	PUS1	95	84.211	Equus_caballus
ENSODEG00000008248	PUS1	87	72.948	ENSELUG00000010424	pus1	84	72.948	Esox_lucius
ENSODEG00000008248	PUS1	100	81.039	ENSFCAG00000010780	PUS1	92	79.949	Felis_catus
ENSODEG00000008248	PUS1	94	76.667	ENSFALG00000008273	PUS1	92	72.379	Ficedula_albicollis
ENSODEG00000008248	PUS1	93	93.768	ENSFDAG00000012518	PUS1	90	92.391	Fukomys_damarensis
ENSODEG00000008248	PUS1	91	68.786	ENSFHEG00000010504	pus1	92	64.908	Fundulus_heteroclitus
ENSODEG00000008248	PUS1	93	65.254	ENSGMOG00000008143	pus1	91	65.254	Gadus_morhua
ENSODEG00000008248	PUS1	92	79.261	ENSGALG00000002354	PUS1	86	79.261	Gallus_gallus
ENSODEG00000008248	PUS1	91	69.653	ENSGAFG00000006578	pus1	83	69.653	Gambusia_affinis
ENSODEG00000008248	PUS1	92	68.195	ENSGACG00000017566	pus1	94	66.997	Gasterosteus_aculeatus
ENSODEG00000008248	PUS1	81	80.456	ENSGAGG00000016730	-	88	80.456	Gopherus_agassizii
ENSODEG00000008248	PUS1	52	30.890	ENSGGOG00000005364	PUSL1	73	30.890	Gorilla_gorilla
ENSODEG00000008248	PUS1	98	83.113	ENSGGOG00000009178	PUS1	92	81.108	Gorilla_gorilla
ENSODEG00000008248	PUS1	89	70.588	ENSHBUG00000001316	pus1	87	70.588	Haplochromis_burtoni
ENSODEG00000008248	PUS1	98	88.000	ENSHGLG00000016086	PUS1	96	89.037	Heterocephalus_glaber_female
ENSODEG00000008248	PUS1	98	87.733	ENSHGLG00100019362	PUS1	96	88.770	Heterocephalus_glaber_male
ENSODEG00000008248	PUS1	96	66.120	ENSHCOG00000014288	pus1	87	64.737	Hippocampus_comes
ENSODEG00000008248	PUS1	90	72.807	ENSIPUG00000010387	pus1	86	72.807	Ictalurus_punctatus
ENSODEG00000008248	PUS1	98	89.276	ENSSTOG00000011245	PUS1	97	84.262	Ictidomys_tridecemlineatus
ENSODEG00000008248	PUS1	98	86.863	ENSJJAG00000000088	Pus1	95	86.544	Jaculus_jaculus
ENSODEG00000008248	PUS1	89	68.732	ENSKMAG00000012702	pus1	81	68.732	Kryptolebias_marmoratus
ENSODEG00000008248	PUS1	92	66.947	ENSLBEG00000002845	pus1	88	66.947	Labrus_bergylta
ENSODEG00000008248	PUS1	85	57.585	ENSLACG00000016044	-	98	57.585	Latimeria_chalumnae
ENSODEG00000008248	PUS1	87	77.644	ENSLACG00000018598	PUS1	91	72.131	Latimeria_chalumnae
ENSODEG00000008248	PUS1	90	76.765	ENSLOCG00000006127	pus1	88	75.284	Lepisosteus_oculatus
ENSODEG00000008248	PUS1	94	78.333	ENSLAFG00000028731	PUS1	99	76.757	Loxodonta_africana
ENSODEG00000008248	PUS1	98	83.508	ENSMFAG00000041194	PUS1	99	81.658	Macaca_fascicularis
ENSODEG00000008248	PUS1	53	30.052	ENSMFAG00000046288	PUSL1	63	30.052	Macaca_fascicularis
ENSODEG00000008248	PUS1	99	83.290	ENSMMUG00000031463	PUS1	99	83.770	Macaca_mulatta
ENSODEG00000008248	PUS1	53	30.052	ENSMNEG00000037989	PUSL1	63	30.052	Macaca_nemestrina
ENSODEG00000008248	PUS1	98	83.770	ENSMNEG00000002814	PUS1	90	88.991	Macaca_nemestrina
ENSODEG00000008248	PUS1	82	91.640	ENSMLEG00000043560	PUS1	99	89.231	Mandrillus_leucophaeus
ENSODEG00000008248	PUS1	89	68.732	ENSMAMG00000007371	pus1	82	67.826	Mastacembelus_armatus
ENSODEG00000008248	PUS1	89	70.588	ENSMZEG00005017746	pus1	81	70.588	Maylandia_zebra
ENSODEG00000008248	PUS1	80	83.498	ENSMGAG00000001958	PUS1	92	83.498	Meleagris_gallopavo
ENSODEG00000008248	PUS1	65	30.075	ENSMGAG00000000851	PUS3	63	30.075	Meleagris_gallopavo
ENSODEG00000008248	PUS1	98	88.298	ENSMAUG00000001482	Pus1	95	87.576	Mesocricetus_auratus
ENSODEG00000008248	PUS1	99	84.595	ENSMICG00000030980	PUS1	97	83.077	Microcebus_murinus
ENSODEG00000008248	PUS1	97	87.903	ENSMOCG00000022311	Pus1	94	87.117	Microtus_ochrogaster
ENSODEG00000008248	PUS1	91	70.435	ENSMMOG00000021022	pus1	89	70.435	Mola_mola
ENSODEG00000008248	PUS1	97	78.049	ENSMODG00000015551	PUS1	83	78.049	Monodelphis_domestica
ENSODEG00000008248	PUS1	96	64.865	ENSMALG00000013202	pus1	94	61.787	Monopterus_albus
ENSODEG00000008248	PUS1	97	87.634	MGP_CAROLIEiJ_G0027551	Pus1	99	84.439	Mus_caroli
ENSODEG00000008248	PUS1	97	87.634	ENSMUSG00000029507	Pus1	99	84.439	Mus_musculus
ENSODEG00000008248	PUS1	97	87.634	MGP_PahariEiJ_G0024133	Pus1	99	84.439	Mus_pahari
ENSODEG00000008248	PUS1	97	87.634	MGP_SPRETEiJ_G0028549	Pus1	99	84.439	Mus_spretus
ENSODEG00000008248	PUS1	97	83.113	ENSMPUG00000002314	PUS1	100	80.457	Mustela_putorius_furo
ENSODEG00000008248	PUS1	54	30.000	ENSMPUG00000014313	PUSL1	65	30.000	Mustela_putorius_furo
ENSODEG00000008248	PUS1	88	90.964	ENSMLUG00000015790	PUS1	91	90.964	Myotis_lucifugus
ENSODEG00000008248	PUS1	97	93.462	ENSNGAG00000012976	Pus1	94	87.768	Nannospalax_galili
ENSODEG00000008248	PUS1	89	70.294	ENSNBRG00000020502	pus1	91	70.294	Neolamprologus_brichardi
ENSODEG00000008248	PUS1	93	86.441	ENSNLEG00000008505	PUS1	99	89.241	Nomascus_leucogenys
ENSODEG00000008248	PUS1	96	69.697	ENSMEUG00000002825	PUS1	98	69.697	Notamacropus_eugenii
ENSODEG00000008248	PUS1	97	74.799	ENSOPRG00000002701	-	98	74.799	Ochotona_princeps
ENSODEG00000008248	PUS1	89	69.275	ENSONIG00000003803	pus1	93	67.477	Oreochromis_niloticus
ENSODEG00000008248	PUS1	87	80.967	ENSOANG00000010619	PUS1	76	80.967	Ornithorhynchus_anatinus
ENSODEG00000008248	PUS1	94	86.351	ENSOCUG00000007310	PUS1	80	85.870	Oryctolagus_cuniculus
ENSODEG00000008248	PUS1	91	70.231	ENSORLG00000010787	pus1	83	70.231	Oryzias_latipes
ENSODEG00000008248	PUS1	87	72.289	ENSORLG00020011483	pus1	80	72.289	Oryzias_latipes_hni
ENSODEG00000008248	PUS1	91	70.809	ENSORLG00015023012	pus1	89	70.809	Oryzias_latipes_hsok
ENSODEG00000008248	PUS1	91	69.364	ENSOMEG00000022655	pus1	81	69.364	Oryzias_melastigma
ENSODEG00000008248	PUS1	93	87.151	ENSOGAG00000008720	PUS1	98	85.224	Otolemur_garnettii
ENSODEG00000008248	PUS1	100	81.234	ENSOARG00000013316	PUS1	94	79.167	Ovis_aries
ENSODEG00000008248	PUS1	98	83.641	ENSPPAG00000040971	PUS1	92	81.612	Pan_paniscus
ENSODEG00000008248	PUS1	53	30.570	ENSPPAG00000029283	PUSL1	63	30.570	Pan_paniscus
ENSODEG00000008248	PUS1	100	80.206	ENSPPRG00000015456	PUS1	98	80.206	Panthera_pardus
ENSODEG00000008248	PUS1	91	84.548	ENSPTIG00000004201	PUS1	91	84.046	Panthera_tigris_altaica
ENSODEG00000008248	PUS1	53	30.570	ENSPTRG00000000021	PUSL1	63	30.570	Pan_troglodytes
ENSODEG00000008248	PUS1	98	83.113	ENSPTRG00000005643	PUS1	92	81.108	Pan_troglodytes
ENSODEG00000008248	PUS1	97	84.718	ENSPANG00000000376	PUS1	90	88.685	Papio_anubis
ENSODEG00000008248	PUS1	86	75.692	ENSPKIG00000019369	pus1	74	75.692	Paramormyrops_kingsleyae
ENSODEG00000008248	PUS1	97	75.000	ENSPSIG00000016432	PUS1	87	75.000	Pelodiscus_sinensis
ENSODEG00000008248	PUS1	53	30.769	ENSPSIG00000002781	PUSL1	71	30.769	Pelodiscus_sinensis
ENSODEG00000008248	PUS1	96	65.659	ENSPMGG00000004522	pus1	95	65.659	Periophthalmus_magnuspinnatus
ENSODEG00000008248	PUS1	98	89.067	ENSPEMG00000013448	Pus1	95	88.450	Peromyscus_maniculatus_bairdii
ENSODEG00000008248	PUS1	86	61.468	ENSPMAG00000004636	pus1	99	61.468	Petromyzon_marinus
ENSODEG00000008248	PUS1	76	80.315	ENSPCIG00000022609	-	74	69.677	Phascolarctos_cinereus
ENSODEG00000008248	PUS1	91	68.786	ENSPFOG00000019669	pus1	88	66.304	Poecilia_formosa
ENSODEG00000008248	PUS1	91	68.786	ENSPLAG00000007185	pus1	88	66.304	Poecilia_latipinna
ENSODEG00000008248	PUS1	91	68.786	ENSPLAG00000002692	-	88	66.304	Poecilia_latipinna
ENSODEG00000008248	PUS1	91	68.986	ENSPMEG00000011115	PUS1	88	66.304	Poecilia_mexicana
ENSODEG00000008248	PUS1	91	68.986	ENSPMEG00000006038	pus1	91	66.304	Poecilia_mexicana
ENSODEG00000008248	PUS1	91	68.406	ENSPREG00000007231	pus1	94	69.231	Poecilia_reticulata
ENSODEG00000008248	PUS1	53	30.052	ENSPPYG00000002014	PUSL1	68	30.052	Pongo_abelii
ENSODEG00000008248	PUS1	98	84.309	ENSPPYG00000005132	PUS1	92	82.234	Pongo_abelii
ENSODEG00000008248	PUS1	77	79.377	ENSPCAG00000009110	-	63	79.377	Procavia_capensis
ENSODEG00000008248	PUS1	96	78.284	ENSPCOG00000015595	PUS1	99	75.439	Propithecus_coquereli
ENSODEG00000008248	PUS1	89	70.294	ENSPNYG00000013571	pus1	81	70.294	Pundamilia_nyererei
ENSODEG00000008248	PUS1	86	75.077	ENSPNAG00000003938	pus1	87	68.392	Pygocentrus_nattereri
ENSODEG00000008248	PUS1	97	87.903	ENSRNOG00000037500	Pus1	99	81.280	Rattus_norvegicus
ENSODEG00000008248	PUS1	52	30.729	ENSRNOG00000022354	Pusl1	90	31.304	Rattus_norvegicus
ENSODEG00000008248	PUS1	98	83.246	ENSRBIG00000043177	PUS1	99	81.156	Rhinopithecus_bieti
ENSODEG00000008248	PUS1	98	82.984	ENSRROG00000039744	PUS1	89	87.789	Rhinopithecus_roxellana
ENSODEG00000008248	PUS1	78	30.854	YGL063W	-	95	30.854	Saccharomyces_cerevisiae
ENSODEG00000008248	PUS1	86	43.262	YPL212C	-	62	40.741	Saccharomyces_cerevisiae
ENSODEG00000008248	PUS1	54	30.000	ENSSBOG00000032249	PUSL1	70	30.000	Saimiri_boliviensis_boliviensis
ENSODEG00000008248	PUS1	97	84.182	ENSSBOG00000023593	PUS1	89	90.584	Saimiri_boliviensis_boliviensis
ENSODEG00000008248	PUS1	96	77.322	ENSSHAG00000013193	PUS1	89	77.322	Sarcophilus_harrisii
ENSODEG00000008248	PUS1	90	75.219	ENSSFOG00015003463	pus1	82	73.204	Scleropages_formosus
ENSODEG00000008248	PUS1	96	65.940	ENSSMAG00000019075	pus1	87	65.940	Scophthalmus_maximus
ENSODEG00000008248	PUS1	96	67.671	ENSSDUG00000007102	pus1	89	66.578	Seriola_dumerili
ENSODEG00000008248	PUS1	96	67.123	ENSSLDG00000022850	pus1	89	66.043	Seriola_lalandi_dorsalis
ENSODEG00000008248	PUS1	80	78.289	ENSSARG00000008367	PUS1	98	78.289	Sorex_araneus
ENSODEG00000008248	PUS1	91	78.324	ENSSPUG00000010009	PUS1	87	78.324	Sphenodon_punctatus
ENSODEG00000008248	PUS1	89	70.501	ENSSPAG00000006272	pus1	86	70.501	Stegastes_partitus
ENSODEG00000008248	PUS1	100	81.491	ENSSSCG00000009741	PUS1	96	81.491	Sus_scrofa
ENSODEG00000008248	PUS1	87	81.212	ENSTGUG00000008068	PUS1	100	81.212	Taeniopygia_guttata
ENSODEG00000008248	PUS1	53	30.964	ENSTGUG00000003214	PUSL1	68	30.964	Taeniopygia_guttata
ENSODEG00000008248	PUS1	94	67.039	ENSTRUG00000002198	pus1	92	67.039	Takifugu_rubripes
ENSODEG00000008248	PUS1	88	69.436	ENSTNIG00000003942	pus1	85	69.733	Tetraodon_nigroviridis
ENSODEG00000008248	PUS1	97	82.540	ENSTTRG00000000632	PUS1	92	81.395	Tursiops_truncatus
ENSODEG00000008248	PUS1	98	81.365	ENSUAMG00000017197	PUS1	100	79.188	Ursus_americanus
ENSODEG00000008248	PUS1	95	83.425	ENSUMAG00000002831	PUS1	100	85.542	Ursus_maritimus
ENSODEG00000008248	PUS1	98	81.698	ENSVVUG00000004199	PUS1	92	78.908	Vulpes_vulpes
ENSODEG00000008248	PUS1	92	73.199	ENSXETG00000002030	pus1	87	73.199	Xenopus_tropicalis
ENSODEG00000008248	PUS1	84	48.589	ENSXETG00000033640	-	99	48.589	Xenopus_tropicalis
ENSODEG00000008248	PUS1	91	69.364	ENSXCOG00000004722	pus1	90	69.364	Xiphophorus_couchianus
ENSODEG00000008248	PUS1	91	69.075	ENSXMAG00000000988	pus1	83	69.075	Xiphophorus_maculatus