EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000008278 (Gene tree)
Gene ID: 101565865
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 354A
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 10999 bases
Position: chrJH651544.1:1978685-1989683
Accession: 101565865
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000011129	zf-C2H2	PF00096.26	2e-68	1	13
ENSODEP00000011129	zf-C2H2	PF00096.26	2e-68	2	13
ENSODEP00000011129	zf-C2H2	PF00096.26	2e-68	3	13
ENSODEP00000011129	zf-C2H2	PF00096.26	2e-68	4	13
ENSODEP00000011129	zf-C2H2	PF00096.26	2e-68	5	13
ENSODEP00000011129	zf-C2H2	PF00096.26	2e-68	6	13
ENSODEP00000011129	zf-C2H2	PF00096.26	2e-68	7	13
ENSODEP00000011129	zf-C2H2	PF00096.26	2e-68	8	13
ENSODEP00000011129	zf-C2H2	PF00096.26	2e-68	9	13
ENSODEP00000011129	zf-C2H2	PF00096.26	2e-68	10	13
ENSODEP00000011129	zf-C2H2	PF00096.26	2e-68	11	13
ENSODEP00000011129	zf-C2H2	PF00096.26	2e-68	12	13
ENSODEP00000011129	zf-C2H2	PF00096.26	2e-68	13	13
ENSODEP00000011128	zf-C2H2	PF00096.26	5.3e-68	1	13
ENSODEP00000011128	zf-C2H2	PF00096.26	5.3e-68	2	13
ENSODEP00000011128	zf-C2H2	PF00096.26	5.3e-68	3	13
ENSODEP00000011128	zf-C2H2	PF00096.26	5.3e-68	4	13
ENSODEP00000011128	zf-C2H2	PF00096.26	5.3e-68	5	13
ENSODEP00000011128	zf-C2H2	PF00096.26	5.3e-68	6	13
ENSODEP00000011128	zf-C2H2	PF00096.26	5.3e-68	7	13
ENSODEP00000011128	zf-C2H2	PF00096.26	5.3e-68	8	13
ENSODEP00000011128	zf-C2H2	PF00096.26	5.3e-68	9	13
ENSODEP00000011128	zf-C2H2	PF00096.26	5.3e-68	10	13
ENSODEP00000011128	zf-C2H2	PF00096.26	5.3e-68	11	13
ENSODEP00000011128	zf-C2H2	PF00096.26	5.3e-68	12	13
ENSODEP00000011128	zf-C2H2	PF00096.26	5.3e-68	13	13
ENSODEP00000011129	zf-met	PF12874.7	1.8e-08	1	2
ENSODEP00000011129	zf-met	PF12874.7	1.8e-08	2	2
ENSODEP00000011128	zf-met	PF12874.7	4.6e-08	1	2
ENSODEP00000011128	zf-met	PF12874.7	4.6e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000011284	-	1623	-	ENSODEP00000011128	534 (aa)	-	-
ENSODET00000011285	-	1503	XM_012514345	ENSODEP00000011129	500 (aa)	XP_012369799	-

Gene Model

Click here to download ENSODEG00000008278's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000008278's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000008278	-	79	37.500	ENSODEG00000014451	MAZ	80	37.500
ENSODEG00000008278	-	88	48.026	ENSODEG00000014404	ZFP1	91	48.000
ENSODEG00000008278	-	87	51.157	ENSODEG00000015543	-	95	51.157
ENSODEG00000008278	-	88	50.281	ENSODEG00000009193	ZNF112	73	49.219
ENSODEG00000008278	-	89	44.633	ENSODEG00000002585	ZNF384	50	44.633
ENSODEG00000008278	-	80	33.168	ENSODEG00000003589	PATZ1	52	33.168
ENSODEG00000008278	-	99	48.849	ENSODEG00000009602	ZNF81	92	48.849
ENSODEG00000008278	-	80	43.396	ENSODEG00000003654	-	54	43.396
ENSODEG00000008278	-	95	48.031	ENSODEG00000006410	-	100	48.031
ENSODEG00000008278	-	95	38.095	ENSODEG00000009133	PRDM5	90	36.680
ENSODEG00000008278	-	88	52.020	ENSODEG00000008851	-	79	52.020
ENSODEG00000008278	-	81	43.158	ENSODEG00000002057	ZNF423	99	38.824
ENSODEG00000008278	-	79	51.524	ENSODEG00000017047	-	91	51.524
ENSODEG00000008278	-	79	41.209	ENSODEG00000005735	ZFP64	74	34.821
ENSODEG00000008278	-	89	52.863	ENSODEG00000005837	ZNF2	68	52.863
ENSODEG00000008278	-	78	36.726	ENSODEG00000011185	ZNF784	76	34.298
ENSODEG00000008278	-	86	36.512	ENSODEG00000020561	ZNF319	90	36.181
ENSODEG00000008278	-	88	50.996	ENSODEG00000014575	-	50	52.193
ENSODEG00000008278	-	99	51.790	ENSODEG00000002735	ZFP62	96	53.719
ENSODEG00000008278	-	100	49.346	ENSODEG00000009980	ZNF582	86	49.346
ENSODEG00000008278	-	88	50.515	ENSODEG00000016460	-	91	48.628
ENSODEG00000008278	-	77	32.963	ENSODEG00000006725	GTF3A	71	32.292
ENSODEG00000008278	-	83	54.667	ENSODEG00000000805	-	100	54.667
ENSODEG00000008278	-	81	44.000	ENSODEG00000019126	ZBTB34	51	44.000
ENSODEG00000008278	-	83	43.966	ENSODEG00000013318	ZNF574	71	35.766

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000008278	-	100	86.508	ENSCAFG00020003589	-	98	86.616	Canis_lupus_dingo
ENSODEG00000008278	-	100	81.387	ENSTSYG00000008405	-	91	81.752	Carlito_syrichta
ENSODEG00000008278	-	92	90.850	ENSCAPG00000013118	-	89	88.224	Cavia_aperea
ENSODEG00000008278	-	100	90.239	ENSCPOG00000034791	-	89	90.239	Cavia_porcellus
ENSODEG00000008278	-	100	87.891	ENSCLAG00000014648	-	92	87.891	Chinchilla_lanigera
ENSODEG00000008278	-	87	95.016	ENSCHOG00000003898	-	100	95.016	Choloepus_hoffmanni
ENSODEG00000008278	-	100	82.149	ENSCHOG00000008173	-	90	82.149	Choloepus_hoffmanni
ENSODEG00000008278	-	99	84.069	ENSCGRG00001021088	Zfp354a	90	84.069	Cricetulus_griseus_chok1gshd
ENSODEG00000008278	-	99	84.069	ENSCGRG00000015037	Zfp354a	90	84.069	Cricetulus_griseus_crigri
ENSODEG00000008278	-	88	95.619	ENSDNOG00000043806	-	100	95.619	Dasypus_novemcinctus
ENSODEG00000008278	-	99	85.490	ENSDORG00000009396	Zfp354a	91	85.490	Dipodomys_ordii
ENSODEG00000008278	-	95	78.557	ENSETEG00000020249	-	100	81.764	Echinops_telfairi
ENSODEG00000008278	-	95	81.346	ENSEEUG00000008362	-	100	81.346	Erinaceus_europaeus
ENSODEG00000008278	-	100	91.451	ENSFDAG00000015190	-	90	91.451	Fukomys_damarensis
ENSODEG00000008278	-	100	92.659	ENSHGLG00000005975	-	90	92.659	Heterocephalus_glaber_female
ENSODEG00000008278	-	94	93.671	ENSHGLG00100012284	-	100	93.671	Heterocephalus_glaber_male
ENSODEG00000008278	-	95	87.780	ENSSTOG00000024118	-	97	87.780	Ictidomys_tridecemlineatus
ENSODEG00000008278	-	93	84.221	ENSLAFG00000002909	-	100	84.221	Loxodonta_africana
ENSODEG00000008278	-	95	83.871	ENSMAUG00000000735	Zfp354a	94	83.871	Mesocricetus_auratus
ENSODEG00000008278	-	99	84.432	ENSMICG00000006390	ZNF354A	91	84.432	Microcebus_murinus
ENSODEG00000008278	-	99	82.184	ENSMOCG00000003692	Zfp354a	90	82.184	Microtus_ochrogaster
ENSODEG00000008278	-	100	83.205	MGP_CAROLIEiJ_G0016306	Zfp354a	90	83.205	Mus_caroli
ENSODEG00000008278	-	100	83.398	ENSMUSG00000020364	Zfp354a	90	83.398	Mus_musculus
ENSODEG00000008278	-	100	82.819	MGP_PahariEiJ_G0017441	Zfp354a	90	82.819	Mus_pahari
ENSODEG00000008278	-	100	85.323	ENSNGAG00000011769	Zfp354a	90	84.932	Nannospalax_galili
ENSODEG00000008278	-	100	86.496	ENSPPAG00000039371	ZNF354A	92	86.496	Pan_paniscus
ENSODEG00000008278	-	98	84.630	ENSPTRG00000017606	ZNF354A	97	84.630	Pan_troglodytes
ENSODEG00000008278	-	100	82.726	ENSPEMG00000024167	Zfp354a	90	82.726	Peromyscus_maniculatus_bairdii
ENSODEG00000008278	-	95	87.605	ENSUAMG00000000212	-	90	87.605	Ursus_americanus