EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000008320 (Gene tree)
Gene ID: 101574079
Gene Symbol: ZC3H4
Alias: -
Full Name: zinc finger CCCH-type containing 4
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 41144 bases
Position: chrJH651712.1:568152-609295
Accession: 101574079
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000011182	zf-CCCH	PF00642.24	2.6e-13	1	1
ENSODEP00000011181	zf-CCCH	PF00642.24	2.6e-13	1	1
ENSODEP00000011184	zf-CCCH	PF00642.24	2.9e-13	1	1
ENSODEP00000011183	zf-CCCH	PF00642.24	3.6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000011337	ZC3H4-201	3945	XM_004644275	ENSODEP00000011181	1314 (aa)	XP_004644332	-
ENSODET00000011338	ZC3H4-202	3927	-	ENSODEP00000011182	1308 (aa)	-	-
ENSODET00000011339	ZC3H4-203	3765	XM_004644276	ENSODEP00000011183	1254 (aa)	XP_023560261	UPI000C9F0300
ENSODET00000011340	ZC3H4-204	3537	-	ENSODEP00000011184	1178 (aa)	-	-

Gene Model

Click here to download ENSODEG00000008320's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000008320's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000008320	ZC3H4	75	40.688	ENSODEG00000009099	ZC3H6	63	47.005

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000008320	ZC3H4	100	89.218	ENSG00000130749	ZC3H4	92	95.614	Homo_sapiens
ENSODEG00000008320	ZC3H4	98	73.085	ENSACAG00000003986	ZC3H4	76	64.093	Anolis_carolinensis
ENSODEG00000008320	ZC3H4	98	86.290	ENSANAG00000023963	ZC3H4	97	87.140	Aotus_nancymaae
ENSODEG00000008320	ZC3H4	73	50.895	ENSAMXG00000009037	zc3h4	54	86.923	Astyanax_mexicanus
ENSODEG00000008320	ZC3H4	100	89.530	ENSBTAG00000009286	ZC3H4	97	89.019	Bos_taurus
ENSODEG00000008320	ZC3H4	98	90.274	ENSCJAG00000011601	ZC3H4	97	86.247	Callithrix_jacchus
ENSODEG00000008320	ZC3H4	98	89.862	ENSCAFG00000004182	ZC3H4	88	83.104	Canis_familiaris
ENSODEG00000008320	ZC3H4	98	89.177	ENSCHIG00000013956	ZC3H4	95	88.353	Capra_hircus
ENSODEG00000008320	ZC3H4	90	88.035	ENSTSYG00000000926	ZC3H4	94	88.035	Carlito_syrichta
ENSODEG00000008320	ZC3H4	98	88.297	ENSCCAG00000037597	ZC3H4	97	88.629	Cebus_capucinus
ENSODEG00000008320	ZC3H4	100	89.142	ENSCATG00000039046	ZC3H4	97	88.387	Cercocebus_atys
ENSODEG00000008320	ZC3H4	94	95.168	ENSCLAG00000001032	ZC3H4	100	95.900	Chinchilla_lanigera
ENSODEG00000008320	ZC3H4	98	90.388	ENSCSAG00000002989	ZC3H4	98	89.984	Chlorocebus_sabaeus
ENSODEG00000008320	ZC3H4	56	65.670	ENSCPBG00000001719	ZC3H4	100	68.448	Chrysemys_picta_bellii
ENSODEG00000008320	ZC3H4	80	86.634	ENSCGRG00001016116	Zc3h4	99	84.387	Cricetulus_griseus_chok1gshd
ENSODEG00000008320	ZC3H4	98	91.908	ENSDNOG00000003764	ZC3H4	95	86.995	Dasypus_novemcinctus
ENSODEG00000008320	ZC3H4	100	88.633	ENSDORG00000002726	Zc3h4	100	86.804	Dipodomys_ordii
ENSODEG00000008320	ZC3H4	82	97.727	ENSETEG00000005763	ZC3H4	77	97.701	Echinops_telfairi
ENSODEG00000008320	ZC3H4	98	91.431	ENSECAG00000024342	ZC3H4	99	91.431	Equus_caballus
ENSODEG00000008320	ZC3H4	81	82.143	ENSEEUG00000000519	ZC3H4	74	78.503	Erinaceus_europaeus
ENSODEG00000008320	ZC3H4	100	89.362	ENSFCAG00000004835	ZC3H4	97	89.704	Felis_catus
ENSODEG00000008320	ZC3H4	98	68.908	ENSGAGG00000019319	ZC3H4	98	68.529	Gopherus_agassizii
ENSODEG00000008320	ZC3H4	98	93.425	ENSGGOG00000013071	ZC3H4	97	89.088	Gorilla_gorilla
ENSODEG00000008320	ZC3H4	100	81.186	ENSSTOG00000016249	ZC3H4	83	86.837	Ictidomys_tridecemlineatus
ENSODEG00000008320	ZC3H4	100	83.542	ENSJJAG00000019068	Zc3h4	100	86.230	Jaculus_jaculus
ENSODEG00000008320	ZC3H4	98	94.785	ENSLAFG00000001586	ZC3H4	100	87.727	Loxodonta_africana
ENSODEG00000008320	ZC3H4	98	93.119	ENSMFAG00000041518	ZC3H4	97	88.932	Macaca_fascicularis
ENSODEG00000008320	ZC3H4	98	90.307	ENSMLEG00000007946	ZC3H4	99	89.903	Mandrillus_leucophaeus
ENSODEG00000008320	ZC3H4	100	85.445	ENSMAUG00000000068	Zc3h4	100	85.445	Mesocricetus_auratus
ENSODEG00000008320	ZC3H4	98	94.037	ENSMICG00000008786	ZC3H4	97	88.941	Microcebus_murinus
ENSODEG00000008320	ZC3H4	91	78.956	ENSMODG00000008978	ZC3H4	95	79.103	Monodelphis_domestica
ENSODEG00000008320	ZC3H4	100	86.231	ENSMUSG00000059273	Zc3h4	100	86.231	Mus_musculus
ENSODEG00000008320	ZC3H4	100	86.367	MGP_PahariEiJ_G0021089	Zc3h4	100	86.425	Mus_pahari
ENSODEG00000008320	ZC3H4	100	85.200	MGP_SPRETEiJ_G0030312	Zc3h4	100	85.333	Mus_spretus
ENSODEG00000008320	ZC3H4	100	84.422	ENSNGAG00000020090	Zc3h4	100	84.269	Nannospalax_galili
ENSODEG00000008320	ZC3H4	78	82.609	ENSMEUG00000009167	ZC3H4	70	87.991	Notamacropus_eugenii
ENSODEG00000008320	ZC3H4	93	86.420	ENSOPRG00000014889	ZC3H4	88	91.512	Ochotona_princeps
ENSODEG00000008320	ZC3H4	80	62.864	ENSOANG00000001794	ZC3H4	54	100.000	Ornithorhynchus_anatinus
ENSODEG00000008320	ZC3H4	95	93.939	ENSOCUG00000026069	ZC3H4	58	94.241	Oryctolagus_cuniculus
ENSODEG00000008320	ZC3H4	100	89.598	ENSOGAG00000031123	ZC3H4	97	88.698	Otolemur_garnettii
ENSODEG00000008320	ZC3H4	98	88.116	ENSPPRG00000023272	ZC3H4	95	88.682	Panthera_pardus
ENSODEG00000008320	ZC3H4	83	86.301	ENSPTIG00000014229	ZC3H4	93	86.301	Panthera_tigris_altaica
ENSODEG00000008320	ZC3H4	98	93.272	ENSPTRG00000011201	ZC3H4	97	89.010	Pan_troglodytes
ENSODEG00000008320	ZC3H4	100	89.674	ENSPANG00000021115	ZC3H4	97	89.244	Papio_anubis
ENSODEG00000008320	ZC3H4	98	70.456	ENSPSIG00000002241	ZC3H4	98	71.840	Pelodiscus_sinensis
ENSODEG00000008320	ZC3H4	100	84.289	ENSPEMG00000009762	Zc3h4	100	82.848	Peromyscus_maniculatus_bairdii
ENSODEG00000008320	ZC3H4	95	88.735	ENSPPYG00000010167	ZC3H4	97	90.690	Pongo_abelii
ENSODEG00000008320	ZC3H4	76	87.538	ENSPCAG00000014919	ZC3H4	97	88.450	Procavia_capensis
ENSODEG00000008320	ZC3H4	98	90.153	ENSPCOG00000017169	ZC3H4	97	89.019	Propithecus_coquereli
ENSODEG00000008320	ZC3H4	94	84.211	ENSPVAG00000005687	ZC3H4	89	86.368	Pteropus_vampyrus
ENSODEG00000008320	ZC3H4	98	84.589	ENSRNOG00000015229	Zc3h4	98	84.332	Rattus_norvegicus
ENSODEG00000008320	ZC3H4	100	88.459	ENSRROG00000032920	ZC3H4	97	88.309	Rhinopithecus_roxellana
ENSODEG00000008320	ZC3H4	92	87.785	ENSSBOG00000030914	ZC3H4	99	87.919	Saimiri_boliviensis_boliviensis
ENSODEG00000008320	ZC3H4	84	84.076	ENSSARG00000014146	ZC3H4	74	88.235	Sorex_araneus
ENSODEG00000008320	ZC3H4	84	86.747	ENSSSCG00000003110	ZC3H4	82	90.776	Sus_scrofa
ENSODEG00000008320	ZC3H4	100	87.960	ENSVVUG00000000208	ZC3H4	98	90.868	Vulpes_vulpes