EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000008335 (Gene tree)
Gene ID: 101590399
Gene Symbol: TRA2A
Alias: AWMS1|htra-2-alpha|tra2a
Full Name: transformer 2 alpha homolog
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 31272 bases
Position: chrJH651530.1:13411335-13442606
Accession: 101590399
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000011205	RRM_1	PF00076.22	1.5e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000011362	TRA2A-201	849	XM_012513647	ENSODEP00000011205	282 (aa)	XP_023565705	UPI00001372AB

Gene Model

Click here to download ENSODEG00000008335's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000008335's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000008335	TRA2A	68	58.537	ENSODEG00000003056	-	57	60.625
ENSODEG00000008335	TRA2A	62	65.979	ENSODEG00000001365	-	80	62.753
ENSODEG00000008335	TRA2A	75	47.619	ENSODEG00000005838	-	50	50.311
ENSODEG00000008335	TRA2A	60	37.097	ENSODEG00000006770	ELAVL4	73	35.821
ENSODEG00000008335	TRA2A	66	62.319	ENSODEG00000011935	-	51	68.944
ENSODEG00000008335	TRA2A	66	64.583	ENSODEG00000010385	-	56	69.182

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000008335	TRA2A	100	100.000	ENSG00000164548	TRA2A	100	100.000	Homo_sapiens
ENSODEG00000008335	TRA2A	90	75.277	ENSAPOG00000017425	tra2a	90	75.277	Acanthochromis_polyacanthus
ENSODEG00000008335	TRA2A	95	97.786	ENSAMEG00000003501	TRA2A	84	97.786	Ailuropoda_melanoleuca
ENSODEG00000008335	TRA2A	54	87.500	ENSACIG00000001333	tra2a	79	87.500	Amphilophus_citrinellus
ENSODEG00000008335	TRA2A	90	76.015	ENSAOCG00000015445	tra2a	90	76.015	Amphiprion_ocellaris
ENSODEG00000008335	TRA2A	90	76.015	ENSAPEG00000018557	tra2a	90	76.015	Amphiprion_percula
ENSODEG00000008335	TRA2A	90	77.491	ENSATEG00000000671	tra2a	90	77.491	Anabas_testudineus
ENSODEG00000008335	TRA2A	95	94.052	ENSAPLG00000013689	TRA2A	100	94.052	Anas_platyrhynchos
ENSODEG00000008335	TRA2A	100	95.423	ENSACAG00000013502	TRA2A	100	95.423	Anolis_carolinensis
ENSODEG00000008335	TRA2A	90	78.967	ENSACLG00000024845	tra2a	90	78.967	Astatotilapia_calliptera
ENSODEG00000008335	TRA2A	60	89.595	ENSAMXG00000005553	tra2a	100	76.190	Astyanax_mexicanus
ENSODEG00000008335	TRA2A	100	99.645	ENSBTAG00000012622	TRA2A	100	99.645	Bos_taurus
ENSODEG00000008335	TRA2A	100	100.000	ENSCJAG00000001509	-	100	100.000	Callithrix_jacchus
ENSODEG00000008335	TRA2A	94	98.106	ENSCJAG00000045802	-	100	98.106	Callithrix_jacchus
ENSODEG00000008335	TRA2A	99	99.642	ENSCAFG00000002788	TRA2A	100	99.642	Canis_familiaris
ENSODEG00000008335	TRA2A	90	98.819	ENSCAFG00020002745	TRA2A	95	98.819	Canis_lupus_dingo
ENSODEG00000008335	TRA2A	100	100.000	ENSTSYG00000000388	TRA2A	100	100.000	Carlito_syrichta
ENSODEG00000008335	TRA2A	86	86.364	ENSCAPG00000017377	TRA2A	87	86.722	Cavia_aperea
ENSODEG00000008335	TRA2A	100	100.000	ENSCPOG00000010739	TRA2A	100	100.000	Cavia_porcellus
ENSODEG00000008335	TRA2A	100	100.000	ENSCCAG00000019576	TRA2A	100	100.000	Cebus_capucinus
ENSODEG00000008335	TRA2A	100	100.000	ENSCATG00000041219	TRA2A	100	100.000	Cercocebus_atys
ENSODEG00000008335	TRA2A	100	100.000	ENSCLAG00000007917	TRA2A	100	100.000	Chinchilla_lanigera
ENSODEG00000008335	TRA2A	99	100.000	ENSCSAG00000014051	TRA2A	99	100.000	Chlorocebus_sabaeus
ENSODEG00000008335	TRA2A	100	99.645	ENSCHOG00000001130	TRA2A	100	99.645	Choloepus_hoffmanni
ENSODEG00000008335	TRA2A	100	96.479	ENSCPBG00000022466	TRA2A	100	96.479	Chrysemys_picta_bellii
ENSODEG00000008335	TRA2A	100	100.000	ENSCANG00000031292	TRA2A	100	100.000	Colobus_angolensis_palliatus
ENSODEG00000008335	TRA2A	100	98.592	ENSCGRG00001019980	Tra2a	100	98.592	Cricetulus_griseus_chok1gshd
ENSODEG00000008335	TRA2A	96	98.529	ENSCGRG00000006087	Tra2a	100	98.529	Cricetulus_griseus_crigri
ENSODEG00000008335	TRA2A	90	71.062	ENSCSEG00000012193	tra2a	90	71.795	Cynoglossus_semilaevis
ENSODEG00000008335	TRA2A	57	81.988	ENSDARG00000007863	tra2a	90	76.471	Danio_rerio
ENSODEG00000008335	TRA2A	100	99.645	ENSDNOG00000039446	TRA2A	100	99.645	Dasypus_novemcinctus
ENSODEG00000008335	TRA2A	100	99.291	ENSDORG00000009361	Tra2a	100	99.291	Dipodomys_ordii
ENSODEG00000008335	TRA2A	100	82.230	ENSETEG00000007250	TRA2A	100	82.230	Echinops_telfairi
ENSODEG00000008335	TRA2A	100	99.645	ENSEASG00005022002	TRA2A	100	99.645	Equus_asinus_asinus
ENSODEG00000008335	TRA2A	100	99.645	ENSECAG00000011508	TRA2A	100	99.645	Equus_caballus
ENSODEG00000008335	TRA2A	100	98.936	ENSEEUG00000015674	TRA2A	100	98.936	Erinaceus_europaeus
ENSODEG00000008335	TRA2A	76	74.576	ENSELUG00000005846	tra2a	91	69.360	Esox_lucius
ENSODEG00000008335	TRA2A	100	99.645	ENSFCAG00000005361	TRA2A	100	99.645	Felis_catus
ENSODEG00000008335	TRA2A	96	94.815	ENSFALG00000009605	TRA2A	100	94.815	Ficedula_albicollis
ENSODEG00000008335	TRA2A	100	99.293	ENSFDAG00000004949	TRA2A	100	99.293	Fukomys_damarensis
ENSODEG00000008335	TRA2A	90	69.675	ENSGMOG00000013740	tra2a	91	69.675	Gadus_morhua
ENSODEG00000008335	TRA2A	100	94.366	ENSGALG00000010973	TRA2A	100	94.366	Gallus_gallus
ENSODEG00000008335	TRA2A	90	75.194	ENSGACG00000006878	tra2a	89	75.581	Gasterosteus_aculeatus
ENSODEG00000008335	TRA2A	100	95.775	ENSGAGG00000005793	TRA2A	100	95.775	Gopherus_agassizii
ENSODEG00000008335	TRA2A	100	100.000	ENSGGOG00000009053	TRA2A	100	100.000	Gorilla_gorilla
ENSODEG00000008335	TRA2A	90	79.705	ENSHBUG00000018234	tra2a	90	79.705	Haplochromis_burtoni
ENSODEG00000008335	TRA2A	100	100.000	ENSHGLG00000012168	TRA2A	100	100.000	Heterocephalus_glaber_female
ENSODEG00000008335	TRA2A	100	100.000	ENSHGLG00100014577	TRA2A	100	100.000	Heterocephalus_glaber_male
ENSODEG00000008335	TRA2A	62	61.979	ENSHCOG00000006320	tra2a	95	62.304	Hippocampus_comes
ENSODEG00000008335	TRA2A	64	64.921	ENSHCOG00000006314	tra2a	66	67.347	Hippocampus_comes
ENSODEG00000008335	TRA2A	100	100.000	ENSSTOG00000012073	TRA2A	100	100.000	Ictidomys_tridecemlineatus
ENSODEG00000008335	TRA2A	100	99.291	ENSJJAG00000022787	Tra2a	100	99.291	Jaculus_jaculus
ENSODEG00000008335	TRA2A	85	75.479	ENSLBEG00000005297	tra2a	88	75.479	Labrus_bergylta
ENSODEG00000008335	TRA2A	90	88.189	ENSLACG00000014765	TRA2A	90	88.189	Latimeria_chalumnae
ENSODEG00000008335	TRA2A	90	77.491	ENSLOCG00000011615	-	90	77.491	Lepisosteus_oculatus
ENSODEG00000008335	TRA2A	100	99.647	ENSLAFG00000006598	TRA2A	100	99.647	Loxodonta_africana
ENSODEG00000008335	TRA2A	100	100.000	ENSMFAG00000043211	TRA2A	100	100.000	Macaca_fascicularis
ENSODEG00000008335	TRA2A	100	100.000	ENSMMUG00000006286	TRA2A	100	100.000	Macaca_mulatta
ENSODEG00000008335	TRA2A	100	100.000	ENSMNEG00000040670	TRA2A	100	100.000	Macaca_nemestrina
ENSODEG00000008335	TRA2A	100	100.000	ENSMLEG00000032154	TRA2A	100	100.000	Mandrillus_leucophaeus
ENSODEG00000008335	TRA2A	76	80.687	ENSMAMG00000008575	tra2a	90	81.034	Mastacembelus_armatus
ENSODEG00000008335	TRA2A	90	78.967	ENSMZEG00005009142	tra2a	90	78.967	Maylandia_zebra
ENSODEG00000008335	TRA2A	96	94.118	ENSMGAG00000010514	TRA2A	100	94.118	Meleagris_gallopavo
ENSODEG00000008335	TRA2A	100	77.305	ENSMICG00000036849	-	88	76.680	Microcebus_murinus
ENSODEG00000008335	TRA2A	100	99.645	ENSMICG00000043639	-	100	100.000	Microcebus_murinus
ENSODEG00000008335	TRA2A	71	82.587	ENSMOCG00000006467	-	97	81.592	Microtus_ochrogaster
ENSODEG00000008335	TRA2A	63	90.960	ENSMOCG00000010249	-	63	90.419	Microtus_ochrogaster
ENSODEG00000008335	TRA2A	87	79.675	ENSMMOG00000020174	tra2a	83	79.583	Mola_mola
ENSODEG00000008335	TRA2A	100	98.227	ENSMODG00000000807	TRA2A	100	98.227	Monodelphis_domestica
ENSODEG00000008335	TRA2A	85	77.308	ENSMALG00000020875	tra2a	90	76.277	Monopterus_albus
ENSODEG00000008335	TRA2A	100	98.592	ENSMUSG00000029817	Tra2a	100	98.592	Mus_musculus
ENSODEG00000008335	TRA2A	100	98.239	MGP_PahariEiJ_G0022115	Tra2a	100	98.239	Mus_pahari
ENSODEG00000008335	TRA2A	100	98.592	MGP_SPRETEiJ_G0029368	Tra2a	100	98.592	Mus_spretus
ENSODEG00000008335	TRA2A	100	99.291	ENSMPUG00000013480	TRA2A	100	99.291	Mustela_putorius_furo
ENSODEG00000008335	TRA2A	100	98.587	ENSMLUG00000013972	TRA2A	100	98.587	Myotis_lucifugus
ENSODEG00000008335	TRA2A	100	98.582	ENSNGAG00000023805	Tra2a	100	98.582	Nannospalax_galili
ENSODEG00000008335	TRA2A	54	89.542	ENSNBRG00000005992	tra2a	73	90.850	Neolamprologus_brichardi
ENSODEG00000008335	TRA2A	100	100.000	ENSNLEG00000014794	TRA2A	100	100.000	Nomascus_leucogenys
ENSODEG00000008335	TRA2A	64	70.718	ENSNLEG00000029659	-	88	76.316	Nomascus_leucogenys
ENSODEG00000008335	TRA2A	100	97.880	ENSMEUG00000001202	TRA2A	100	97.880	Notamacropus_eugenii
ENSODEG00000008335	TRA2A	100	98.582	ENSOPRG00000007606	TRA2A	100	98.582	Ochotona_princeps
ENSODEG00000008335	TRA2A	90	78.832	ENSONIG00000004503	tra2a	90	78.832	Oreochromis_niloticus
ENSODEG00000008335	TRA2A	89	88.760	ENSOANG00000014202	TRA2A	90	87.984	Ornithorhynchus_anatinus
ENSODEG00000008335	TRA2A	100	99.645	ENSOCUG00000024139	TRA2A	100	99.645	Oryctolagus_cuniculus
ENSODEG00000008335	TRA2A	82	69.697	ENSORLG00000022191	tra2a	60	74.251	Oryzias_latipes
ENSODEG00000008335	TRA2A	82	69.264	ENSORLG00020003490	tra2a	60	73.653	Oryzias_latipes_hni
ENSODEG00000008335	TRA2A	82	68.831	ENSORLG00015015485	tra2a	60	73.054	Oryzias_latipes_hsok
ENSODEG00000008335	TRA2A	82	67.965	ENSOMEG00000017864	tra2a	60	71.856	Oryzias_melastigma
ENSODEG00000008335	TRA2A	99	97.143	ENSOGAG00000009733	TRA2A	99	97.143	Otolemur_garnettii
ENSODEG00000008335	TRA2A	90	87.891	ENSOARG00000002323	-	100	90.175	Ovis_aries
ENSODEG00000008335	TRA2A	100	98.582	ENSOARG00000013147	TRA2A	100	98.582	Ovis_aries
ENSODEG00000008335	TRA2A	99	100.000	ENSPPAG00000034382	TRA2A	99	100.000	Pan_paniscus
ENSODEG00000008335	TRA2A	100	99.645	ENSPPRG00000015216	TRA2A	100	99.645	Panthera_pardus
ENSODEG00000008335	TRA2A	100	99.645	ENSPTIG00000021114	TRA2A	100	99.645	Panthera_tigris_altaica
ENSODEG00000008335	TRA2A	100	100.000	ENSPTRG00000046098	-	100	100.000	Pan_troglodytes
ENSODEG00000008335	TRA2A	100	100.000	ENSPTRG00000018988	TRA2A	100	100.000	Pan_troglodytes
ENSODEG00000008335	TRA2A	100	100.000	ENSPANG00000014541	TRA2A	100	100.000	Papio_anubis
ENSODEG00000008335	TRA2A	90	76.384	ENSPKIG00000012298	tra2a	90	75.646	Paramormyrops_kingsleyae
ENSODEG00000008335	TRA2A	88	94.378	ENSPSIG00000014993	TRA2A	90	94.378	Pelodiscus_sinensis
ENSODEG00000008335	TRA2A	100	98.940	ENSPEMG00000008564	-	100	98.940	Peromyscus_maniculatus_bairdii
ENSODEG00000008335	TRA2A	63	69.663	ENSPMAG00000007947	tra2a	59	69.697	Petromyzon_marinus
ENSODEG00000008335	TRA2A	100	98.227	ENSPCIG00000007917	TRA2A	100	98.227	Phascolarctos_cinereus
ENSODEG00000008335	TRA2A	100	100.000	ENSPPYG00000017728	TRA2A	100	100.000	Pongo_abelii
ENSODEG00000008335	TRA2A	99	98.929	ENSPCAG00000004148	TRA2A	100	98.929	Procavia_capensis
ENSODEG00000008335	TRA2A	100	85.816	ENSPCOG00000020465	TRA2A	100	85.816	Propithecus_coquereli
ENSODEG00000008335	TRA2A	100	99.293	ENSPVAG00000011298	TRA2A	100	99.293	Pteropus_vampyrus
ENSODEG00000008335	TRA2A	54	87.821	ENSPNYG00000020134	tra2a	76	87.821	Pundamilia_nyererei
ENSODEG00000008335	TRA2A	90	73.432	ENSPNAG00000000482	tra2a	90	71.218	Pygocentrus_nattereri
ENSODEG00000008335	TRA2A	100	98.592	ENSRNOG00000009156	Tra2a	100	98.592	Rattus_norvegicus
ENSODEG00000008335	TRA2A	100	99.645	ENSRROG00000030758	TRA2A	100	100.000	Rhinopithecus_roxellana
ENSODEG00000008335	TRA2A	100	100.000	ENSSBOG00000031562	TRA2A	100	100.000	Saimiri_boliviensis_boliviensis
ENSODEG00000008335	TRA2A	89	95.600	ENSSHAG00000005727	TRA2A	88	95.600	Sarcophilus_harrisii
ENSODEG00000008335	TRA2A	90	80.237	ENSSFOG00015014004	tra2a	90	74.908	Scleropages_formosus
ENSODEG00000008335	TRA2A	93	73.759	ENSSMAG00000014242	tra2a	90	73.432	Scophthalmus_maximus
ENSODEG00000008335	TRA2A	90	83.594	ENSSDUG00000005610	tra2a	89	83.594	Seriola_dumerili
ENSODEG00000008335	TRA2A	54	88.158	ENSSLDG00000025577	tra2a	81	88.158	Seriola_lalandi_dorsalis
ENSODEG00000008335	TRA2A	100	78.014	ENSSARG00000012900	TRA2A	100	78.014	Sorex_araneus
ENSODEG00000008335	TRA2A	100	96.516	ENSSPUG00000006143	TRA2A	100	96.516	Sphenodon_punctatus
ENSODEG00000008335	TRA2A	90	78.967	ENSSPAG00000004184	tra2a	90	78.967	Stegastes_partitus
ENSODEG00000008335	TRA2A	100	99.645	ENSSSCG00000015387	TRA2A	100	99.645	Sus_scrofa
ENSODEG00000008335	TRA2A	60	90.000	ENSTGUG00000002795	TRA2A	62	89.222	Taeniopygia_guttata
ENSODEG00000008335	TRA2A	100	83.333	ENSTBEG00000013773	TRA2A	100	83.333	Tupaia_belangeri
ENSODEG00000008335	TRA2A	100	99.291	ENSTTRG00000008922	TRA2A	100	99.291	Tursiops_truncatus
ENSODEG00000008335	TRA2A	64	98.352	ENSUMAG00000001181	TRA2A	94	98.352	Ursus_maritimus
ENSODEG00000008335	TRA2A	100	85.461	ENSVPAG00000001829	TRA2A	100	85.461	Vicugna_pacos
ENSODEG00000008335	TRA2A	100	99.645	ENSVVUG00000001045	TRA2A	100	99.645	Vulpes_vulpes
ENSODEG00000008335	TRA2A	90	83.270	ENSXETG00000007397	tra2a	90	83.270	Xenopus_tropicalis