EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000008400 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 4080 bases
Position: chrJH651585.1:5471867-5475946
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000011302	Anticodon_1	PF08264.13	8.2e-09	1	1
ENSODEP00000011301	tRNA-synt_1	PF00133.22	1.9e-98	1	2
ENSODEP00000011301	tRNA-synt_1	PF00133.22	1.9e-98	2	2
ENSODEP00000011302	tRNA-synt_1	PF00133.22	5e-96	1	2
ENSODEP00000011302	tRNA-synt_1	PF00133.22	5e-96	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000011459	-	1257	-	ENSODEP00000011301	418 (aa)	-	-
ENSODET00000011460	-	2565	-	ENSODEP00000011302	854 (aa)	-	-

Gene Model

Click here to download ENSODEG00000008400's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000008400's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000008400	-	98	76.723	ENSODEG00000004404	-	81	76.723

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000008400	-	98	72.086	ENSG00000196305	IARS	95	68.254	Homo_sapiens
ENSODEG00000008400	-	98	59.663	ENSAPOG00000002559	iars	80	60.429	Acanthochromis_polyacanthus
ENSODEG00000008400	-	98	68.300	ENSAMEG00000013415	IARS	81	68.300	Ailuropoda_melanoleuca
ENSODEG00000008400	-	98	60.583	ENSACIG00000018381	iars	84	59.663	Amphilophus_citrinellus
ENSODEG00000008400	-	98	56.400	ENSAOCG00000006976	iars	99	56.400	Amphiprion_ocellaris
ENSODEG00000008400	-	98	61.963	ENSAPEG00000005602	iars	81	61.043	Amphiprion_percula
ENSODEG00000008400	-	98	62.117	ENSATEG00000024989	iars	81	61.043	Anabas_testudineus
ENSODEG00000008400	-	98	64.472	ENSAPLG00000005750	IARS	81	63.553	Anas_platyrhynchos
ENSODEG00000008400	-	98	65.084	ENSACAG00000009212	IARS	81	64.319	Anolis_carolinensis
ENSODEG00000008400	-	98	71.626	ENSANAG00000035740	IARS	81	71.626	Aotus_nancymaae
ENSODEG00000008400	-	98	62.117	ENSACLG00000017656	iars	81	59.389	Astatotilapia_calliptera
ENSODEG00000008400	-	98	62.730	ENSAMXG00000036265	iars	81	61.810	Astyanax_mexicanus
ENSODEG00000008400	-	98	69.985	ENSBTAG00000000974	IARS	81	69.985	Bos_taurus
ENSODEG00000008400	-	98	47.782	WBGene00002152	iars-1	72	48.372	Caenorhabditis_elegans
ENSODEG00000008400	-	97	71.626	ENSCJAG00000020465	IARS	80	71.626	Callithrix_jacchus
ENSODEG00000008400	-	98	68.760	ENSCAFG00000002340	IARS	81	68.760	Canis_familiaris
ENSODEG00000008400	-	98	68.760	ENSCAFG00020009677	IARS	91	68.673	Canis_lupus_dingo
ENSODEG00000008400	-	98	70.444	ENSCHIG00000023719	IARS	81	70.444	Capra_hircus
ENSODEG00000008400	-	98	71.057	ENSTSYG00000001294	IARS	81	71.057	Carlito_syrichta
ENSODEG00000008400	-	91	74.299	ENSCAPG00000008012	IARS	74	69.877	Cavia_aperea
ENSODEG00000008400	-	96	74.299	ENSCPOG00000000819	IARS	81	71.779	Cavia_porcellus
ENSODEG00000008400	-	98	71.933	ENSCCAG00000022901	IARS	81	71.933	Cebus_capucinus
ENSODEG00000008400	-	98	71.739	ENSCATG00000044530	IARS	92	71.472	Cercocebus_atys
ENSODEG00000008400	-	95	72.425	ENSCLAG00000003319	IARS	85	72.425	Chinchilla_lanigera
ENSODEG00000008400	-	98	71.166	ENSCSAG00000007241	IARS	81	71.166	Chlorocebus_sabaeus
ENSODEG00000008400	-	90	62.129	ENSCHOG00000007264	IARS	73	62.129	Choloepus_hoffmanni
ENSODEG00000008400	-	75	81.967	ENSCPBG00000001174	IARS	90	55.079	Chrysemys_picta_bellii
ENSODEG00000008400	-	98	51.613	ENSCING00000002466	-	77	52.703	Ciona_intestinalis
ENSODEG00000008400	-	95	65.185	ENSCSAVG00000008078	-	89	53.109	Ciona_savignyi
ENSODEG00000008400	-	98	70.706	ENSCGRG00001023981	Iars	81	70.706	Cricetulus_griseus_chok1gshd
ENSODEG00000008400	-	98	70.706	ENSCGRG00000007869	Iars	81	70.706	Cricetulus_griseus_crigri
ENSODEG00000008400	-	98	61.963	ENSCSEG00000010191	iars	84	60.736	Cynoglossus_semilaevis
ENSODEG00000008400	-	74	56.842	ENSCVAG00000023077	-	95	56.842	Cyprinodon_variegatus
ENSODEG00000008400	-	99	61.963	ENSDARG00000007955	iars	84	60.890	Danio_rerio
ENSODEG00000008400	-	98	66.365	ENSDNOG00000019773	IARS	81	66.717	Dasypus_novemcinctus
ENSODEG00000008400	-	98	71.057	ENSDORG00000004383	Iars	81	71.057	Dipodomys_ordii
ENSODEG00000008400	-	98	48.283	FBgn0027086	IleRS	69	47.534	Drosophila_melanogaster
ENSODEG00000008400	-	98	48.992	ENSEBUG00000016686	iars	78	49.231	Eptatretus_burgeri
ENSODEG00000008400	-	98	68.750	ENSEASG00005009580	IARS	93	68.750	Equus_asinus_asinus
ENSODEG00000008400	-	98	68.952	ENSECAG00000023253	IARS	93	68.952	Equus_caballus
ENSODEG00000008400	-	80	75.410	ENSEEUG00000012427	IARS	66	75.410	Erinaceus_europaeus
ENSODEG00000008400	-	96	55.832	ENSELUG00000015636	iars	81	55.521	Esox_lucius
ENSODEG00000008400	-	98	69.525	ENSFCAG00000000817	IARS	81	69.525	Felis_catus
ENSODEG00000008400	-	98	60.685	ENSFALG00000010261	IARS	70	63.400	Ficedula_albicollis
ENSODEG00000008400	-	98	73.006	ENSFDAG00000010686	IARS	81	73.006	Fukomys_damarensis
ENSODEG00000008400	-	98	61.656	ENSFHEG00000015399	iars	89	60.736	Fundulus_heteroclitus
ENSODEG00000008400	-	98	60.123	ENSGMOG00000003632	iars	81	60.123	Gadus_morhua
ENSODEG00000008400	-	98	64.319	ENSGALG00000004813	IARS	81	63.553	Gallus_gallus
ENSODEG00000008400	-	98	61.810	ENSGAFG00000012832	iars	81	60.890	Gambusia_affinis
ENSODEG00000008400	-	98	61.043	ENSGACG00000007055	iars	81	60.123	Gasterosteus_aculeatus
ENSODEG00000008400	-	98	62.903	ENSGAGG00000017539	IARS	80	65.237	Gopherus_agassizii
ENSODEG00000008400	-	98	72.239	ENSGGOG00000010212	IARS	81	72.239	Gorilla_gorilla
ENSODEG00000008400	-	98	61.963	ENSHBUG00000010503	iars	79	61.043	Haplochromis_burtoni
ENSODEG00000008400	-	96	73.364	ENSHGLG00000011793	IARS	81	72.239	Heterocephalus_glaber_female
ENSODEG00000008400	-	96	73.313	ENSHGLG00100019375	-	81	73.313	Heterocephalus_glaber_male
ENSODEG00000008400	-	87	63.707	ENSHGLG00100010624	-	91	63.707	Heterocephalus_glaber_male
ENSODEG00000008400	-	98	61.503	ENSHCOG00000017482	iars	81	60.583	Hippocampus_comes
ENSODEG00000008400	-	98	61.868	ENSIPUG00000012333	iars	81	61.868	Ictalurus_punctatus
ENSODEG00000008400	-	98	72.086	ENSSTOG00000015173	IARS	81	72.086	Ictidomys_tridecemlineatus
ENSODEG00000008400	-	98	70.399	ENSJJAG00000012564	Iars	81	70.399	Jaculus_jaculus
ENSODEG00000008400	-	98	60.736	ENSKMAG00000011154	iars	81	59.969	Kryptolebias_marmoratus
ENSODEG00000008400	-	98	62.117	ENSLBEG00000016283	iars	81	61.350	Labrus_bergylta
ENSODEG00000008400	-	98	63.957	ENSLACG00000018913	IARS	81	63.190	Latimeria_chalumnae
ENSODEG00000008400	-	98	63.650	ENSLOCG00000013871	iars	81	62.577	Lepisosteus_oculatus
ENSODEG00000008400	-	98	68.913	ENSLAFG00000012996	IARS	81	68.913	Loxodonta_africana
ENSODEG00000008400	-	98	71.472	ENSMFAG00000033748	IARS	92	71.472	Macaca_fascicularis
ENSODEG00000008400	-	98	71.472	ENSMMUG00000004628	IARS	89	71.472	Macaca_mulatta
ENSODEG00000008400	-	98	71.472	ENSMNEG00000018792	IARS	92	71.472	Macaca_nemestrina
ENSODEG00000008400	-	98	69.565	ENSMLEG00000035022	IARS	81	68.252	Mandrillus_leucophaeus
ENSODEG00000008400	-	98	59.969	ENSMAMG00000014297	iars	81	59.202	Mastacembelus_armatus
ENSODEG00000008400	-	98	62.117	ENSMZEG00005013533	iars	81	59.389	Maylandia_zebra
ENSODEG00000008400	-	98	64.778	ENSMGAG00000004555	IARS	80	64.012	Meleagris_gallopavo
ENSODEG00000008400	-	98	70.399	ENSMAUG00000018695	Iars	81	70.399	Mesocricetus_auratus
ENSODEG00000008400	-	98	70.904	ENSMICG00000014286	IARS	81	70.904	Microcebus_murinus
ENSODEG00000008400	-	98	71.166	ENSMOCG00000022610	Iars	81	70.706	Microtus_ochrogaster
ENSODEG00000008400	-	95	59.293	ENSMMOG00000010432	iars	80	58.372	Mola_mola
ENSODEG00000008400	-	98	67.075	ENSMODG00000020876	IARS	81	67.075	Monodelphis_domestica
ENSODEG00000008400	-	98	61.562	ENSMALG00000008778	iars	81	60.796	Monopterus_albus
ENSODEG00000008400	-	98	70.399	MGP_CAROLIEiJ_G0018510	Iars	100	73.913	Mus_caroli
ENSODEG00000008400	-	98	70.399	ENSMUSG00000037851	Iars	100	73.913	Mus_musculus
ENSODEG00000008400	-	98	70.399	MGP_PahariEiJ_G0019576	Iars	100	73.913	Mus_pahari
ENSODEG00000008400	-	98	69.632	MGP_SPRETEiJ_G0019390	Iars	100	73.913	Mus_spretus
ENSODEG00000008400	-	95	71.987	ENSMPUG00000004835	IARS	75	71.987	Mustela_putorius_furo
ENSODEG00000008400	-	98	70.399	ENSMLUG00000015180	IARS	81	70.399	Myotis_lucifugus
ENSODEG00000008400	-	98	67.944	ENSNGAG00000007880	-	96	67.944	Nannospalax_galili
ENSODEG00000008400	-	98	61.963	ENSNBRG00000022044	iars	81	61.043	Neolamprologus_brichardi
ENSODEG00000008400	-	98	72.086	ENSNLEG00000016253	IARS	81	72.086	Nomascus_leucogenys
ENSODEG00000008400	-	98	60.949	ENSMEUG00000011662	IARS	81	60.949	Notamacropus_eugenii
ENSODEG00000008400	-	71	76.923	ENSOPRG00000009618	-	63	76.923	Ochotona_princeps
ENSODEG00000008400	-	98	61.656	ENSONIG00000014366	iars	81	61.656	Oreochromis_niloticus
ENSODEG00000008400	-	94	67.233	ENSOANG00000000112	-	87	67.233	Ornithorhynchus_anatinus
ENSODEG00000008400	-	98	70.859	ENSOCUG00000016888	IARS	81	70.859	Oryctolagus_cuniculus
ENSODEG00000008400	-	98	61.350	ENSORLG00000004747	iars	81	60.583	Oryzias_latipes
ENSODEG00000008400	-	98	49.847	ENSORLG00020018714	iars	79	49.083	Oryzias_latipes_hni
ENSODEG00000008400	-	98	61.350	ENSORLG00015014606	iars	81	60.583	Oryzias_latipes_hsok
ENSODEG00000008400	-	98	61.656	ENSOMEG00000020072	iars	83	60.890	Oryzias_melastigma
ENSODEG00000008400	-	98	71.101	ENSOGAG00000015426	IARS	81	71.101	Otolemur_garnettii
ENSODEG00000008400	-	98	70.444	ENSOARG00000008328	IARS	81	70.444	Ovis_aries
ENSODEG00000008400	-	98	72.086	ENSPPAG00000027754	IARS	81	72.086	Pan_paniscus
ENSODEG00000008400	-	98	69.525	ENSPPRG00000008953	IARS	81	69.525	Panthera_pardus
ENSODEG00000008400	-	98	69.678	ENSPTIG00000015464	IARS	89	69.678	Panthera_tigris_altaica
ENSODEG00000008400	-	98	68.548	ENSPTRG00000021108	IARS	76	72.129	Pan_troglodytes
ENSODEG00000008400	-	98	71.472	ENSPANG00000024723	IARS	92	71.472	Papio_anubis
ENSODEG00000008400	-	98	60.583	ENSPKIG00000025011	iars	81	59.663	Paramormyrops_kingsleyae
ENSODEG00000008400	-	98	63.456	ENSPSIG00000011011	IARS	81	62.691	Pelodiscus_sinensis
ENSODEG00000008400	-	98	54.584	ENSPMGG00000005379	iars	75	59.356	Periophthalmus_magnuspinnatus
ENSODEG00000008400	-	98	70.552	ENSPEMG00000012867	Iars	81	70.552	Peromyscus_maniculatus_bairdii
ENSODEG00000008400	-	98	66.156	ENSPCIG00000023807	IARS	77	65.356	Phascolarctos_cinereus
ENSODEG00000008400	-	98	61.963	ENSPFOG00000011883	iars	81	60.890	Poecilia_formosa
ENSODEG00000008400	-	98	61.963	ENSPLAG00000012010	iars	81	60.890	Poecilia_latipinna
ENSODEG00000008400	-	98	61.963	ENSPMEG00000018215	iars	83	59.663	Poecilia_mexicana
ENSODEG00000008400	-	98	61.963	ENSPREG00000006938	iars	81	60.890	Poecilia_reticulata
ENSODEG00000008400	-	98	65.184	ENSPPYG00000019374	IARS	80	65.184	Pongo_abelii
ENSODEG00000008400	-	97	65.070	ENSPCAG00000013215	IARS	80	65.070	Procavia_capensis
ENSODEG00000008400	-	98	71.516	ENSPCOG00000017998	IARS	81	71.516	Propithecus_coquereli
ENSODEG00000008400	-	98	63.508	ENSPVAG00000010269	IARS	74	66.769	Pteropus_vampyrus
ENSODEG00000008400	-	99	59.680	ENSPNYG00000019391	iars	83	58.806	Pundamilia_nyererei
ENSODEG00000008400	-	94	57.034	ENSPNAG00000008441	iars	79	56.116	Pygocentrus_nattereri
ENSODEG00000008400	-	98	67.339	ENSRNOG00000052977	LOC103690033	99	67.339	Rattus_norvegicus
ENSODEG00000008400	-	98	70.597	ENSRNOG00000014616	Iars	81	70.597	Rattus_norvegicus
ENSODEG00000008400	-	98	68.347	ENSRBIG00000038873	IARS	80	69.952	Rhinopithecus_bieti
ENSODEG00000008400	-	98	71.166	ENSRROG00000028942	IARS	92	71.166	Rhinopithecus_roxellana
ENSODEG00000008400	-	99	41.283	YBL076C	ILS1	58	44.728	Saccharomyces_cerevisiae
ENSODEG00000008400	-	98	70.801	ENSSBOG00000001596	IARS	91	72.846	Saimiri_boliviensis_boliviensis
ENSODEG00000008400	-	96	67.485	ENSSHAG00000000237	IARS	83	67.485	Sarcophilus_harrisii
ENSODEG00000008400	-	98	60.429	ENSSFOG00015001874	iars	80	59.969	Scleropages_formosus
ENSODEG00000008400	-	98	61.350	ENSSMAG00000013630	iars	81	60.429	Scophthalmus_maximus
ENSODEG00000008400	-	98	61.503	ENSSDUG00000016007	iars	81	60.583	Seriola_dumerili
ENSODEG00000008400	-	98	61.350	ENSSLDG00000003987	iars	81	58.742	Seriola_lalandi_dorsalis
ENSODEG00000008400	-	98	69.372	ENSSARG00000010543	IARS	81	69.372	Sorex_araneus
ENSODEG00000008400	-	98	61.868	ENSSPUG00000002467	IARS	89	60.184	Sphenodon_punctatus
ENSODEG00000008400	-	98	61.963	ENSSPAG00000020176	iars	81	61.043	Stegastes_partitus
ENSODEG00000008400	-	98	70.597	ENSSSCG00000008068	IARS	90	70.597	Sus_scrofa
ENSODEG00000008400	-	98	63.374	ENSTGUG00000004410	IARS	81	62.614	Taeniopygia_guttata
ENSODEG00000008400	-	98	61.350	ENSTRUG00000007056	iars	81	60.583	Takifugu_rubripes
ENSODEG00000008400	-	98	61.656	ENSTNIG00000014814	iars	80	60.736	Tetraodon_nigroviridis
ENSODEG00000008400	-	89	75.758	ENSTBEG00000014010	IARS	57	76.503	Tupaia_belangeri
ENSODEG00000008400	-	98	68.453	ENSTTRG00000008240	IARS	81	68.453	Tursiops_truncatus
ENSODEG00000008400	-	98	68.712	ENSUAMG00000013778	IARS	81	68.712	Ursus_americanus
ENSODEG00000008400	-	98	69.066	ENSUMAG00000015456	IARS	81	69.066	Ursus_maritimus
ENSODEG00000008400	-	98	67.945	ENSVPAG00000008524	IARS	81	67.945	Vicugna_pacos
ENSODEG00000008400	-	98	69.066	ENSVVUG00000004144	IARS	84	68.673	Vulpes_vulpes
ENSODEG00000008400	-	97	62.883	ENSXETG00000020903	iars	81	62.883	Xenopus_tropicalis
ENSODEG00000008400	-	98	62.423	ENSXMAG00000017562	iars	85	61.350	Xiphophorus_maculatus