EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000008559 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 350 bases
Position: chrJH651655.1:2392026-2392375
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000011504	RNA_pol_L_2	PF13656.6	1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000011663	-	327	-	ENSODEP00000011504	108 (aa)	-	-

Gene Model

Click here to download ENSODEG00000008559's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000008559's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000008559	-	100	76.923	ENSODEG00000015648	-	100	76.923
ENSODEG00000008559	-	69	33.333	ENSODEG00000005294	-	56	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000008559	-	100	76.923	ENSG00000005075	POLR2J	100	76.923	Homo_sapiens
ENSODEG00000008559	-	91	73.832	ENSG00000228049	POLR2J2	94	71.560	Homo_sapiens
ENSODEG00000008559	-	100	73.504	ENSAPOG00000019538	polr2j	100	73.504	Acanthochromis_polyacanthus
ENSODEG00000008559	-	100	70.866	ENSAMEG00000015480	-	100	70.866	Ailuropoda_melanoleuca
ENSODEG00000008559	-	93	54.545	ENSACIG00000014549	POLR2J2	91	54.545	Amphilophus_citrinellus
ENSODEG00000008559	-	100	72.650	ENSAOCG00000006937	polr2j	100	72.650	Amphiprion_ocellaris
ENSODEG00000008559	-	100	73.504	ENSAPEG00000021761	polr2j	100	73.504	Amphiprion_percula
ENSODEG00000008559	-	100	73.504	ENSATEG00000009731	polr2j	100	73.504	Anabas_testudineus
ENSODEG00000008559	-	100	73.504	ENSATEG00000013312	-	100	73.504	Anabas_testudineus
ENSODEG00000008559	-	85	73.267	ENSAPLG00000003744	-	100	73.267	Anas_platyrhynchos
ENSODEG00000008559	-	100	70.940	ENSACAG00000000251	POLR2J	100	70.940	Anolis_carolinensis
ENSODEG00000008559	-	100	73.504	ENSACLG00000014564	polr2j	100	73.504	Astatotilapia_calliptera
ENSODEG00000008559	-	100	75.214	ENSAMXG00000007517	polr2j	100	75.214	Astyanax_mexicanus
ENSODEG00000008559	-	56	52.857	ENSBTAG00000048046	-	59	52.857	Bos_taurus
ENSODEG00000008559	-	94	56.364	WBGene00012187	rpb-11	89	56.364	Caenorhabditis_elegans
ENSODEG00000008559	-	100	76.923	ENSCJAG00000016203	-	100	76.923	Callithrix_jacchus
ENSODEG00000008559	-	100	76.923	ENSCAFG00000013683	-	100	76.923	Canis_familiaris
ENSODEG00000008559	-	83	74.747	ENSTSYG00000029243	-	85	74.747	Carlito_syrichta
ENSODEG00000008559	-	100	76.923	ENSCPOG00000001401	-	100	76.923	Cavia_porcellus
ENSODEG00000008559	-	100	65.741	ENSCATG00000016595	-	100	65.741	Cercocebus_atys
ENSODEG00000008559	-	100	76.923	ENSCLAG00000005238	-	100	76.923	Chinchilla_lanigera
ENSODEG00000008559	-	100	76.923	ENSCSAG00000018092	-	100	76.923	Chlorocebus_sabaeus
ENSODEG00000008559	-	100	66.667	ENSCING00000020531	-	100	66.667	Ciona_intestinalis
ENSODEG00000008559	-	100	67.521	ENSCSAVG00000006948	-	100	67.521	Ciona_savignyi
ENSODEG00000008559	-	100	76.923	ENSCGRG00001012814	Polr2j	100	76.923	Cricetulus_griseus_chok1gshd
ENSODEG00000008559	-	100	64.103	ENSCGRG00000008433	Polr2j	100	64.103	Cricetulus_griseus_crigri
ENSODEG00000008559	-	100	71.795	ENSCSEG00000020352	polr2j	100	71.795	Cynoglossus_semilaevis
ENSODEG00000008559	-	100	72.650	ENSCVAG00000014267	polr2j	100	72.650	Cyprinodon_variegatus
ENSODEG00000008559	-	100	74.359	ENSDARG00000035146	polr2j	100	74.359	Danio_rerio
ENSODEG00000008559	-	100	76.923	ENSDORG00000005934	Polr2j	100	76.923	Dipodomys_ordii
ENSODEG00000008559	-	98	60.870	FBgn0032634	Rpb11	98	60.870	Drosophila_melanogaster
ENSODEG00000008559	-	100	58.333	ENSEBUG00000016100	polr2j	100	58.333	Eptatretus_burgeri
ENSODEG00000008559	-	100	76.923	ENSEASG00005016864	-	100	76.923	Equus_asinus_asinus
ENSODEG00000008559	-	100	74.359	ENSELUG00000012822	polr2j	100	74.359	Esox_lucius
ENSODEG00000008559	-	100	76.923	ENSFCAG00000000377	-	100	76.923	Felis_catus
ENSODEG00000008559	-	100	76.923	ENSFALG00000009523	POLR2J	100	76.923	Ficedula_albicollis
ENSODEG00000008559	-	100	76.923	ENSFDAG00000010507	-	100	76.923	Fukomys_damarensis
ENSODEG00000008559	-	100	73.504	ENSFHEG00000006625	polr2j	100	73.504	Fundulus_heteroclitus
ENSODEG00000008559	-	100	73.504	ENSGMOG00000018207	polr2j	100	73.504	Gadus_morhua
ENSODEG00000008559	-	100	76.923	ENSGALG00000030808	-	100	76.923	Gallus_gallus
ENSODEG00000008559	-	100	73.504	ENSGAFG00000019555	polr2j	100	73.504	Gambusia_affinis
ENSODEG00000008559	-	100	73.504	ENSGACG00000003310	polr2j	100	73.504	Gasterosteus_aculeatus
ENSODEG00000008559	-	84	74.000	ENSGAGG00000018304	-	91	74.000	Gopherus_agassizii
ENSODEG00000008559	-	84	72.000	ENSGGOG00000004519	-	80	72.000	Gorilla_gorilla
ENSODEG00000008559	-	100	73.504	ENSHBUG00000008467	polr2j	100	73.504	Haplochromis_burtoni
ENSODEG00000008559	-	100	76.923	ENSHGLG00000013598	POLR2J	100	76.923	Heterocephalus_glaber_female
ENSODEG00000008559	-	100	76.923	ENSHGLG00100011242	POLR2J	100	76.923	Heterocephalus_glaber_male
ENSODEG00000008559	-	100	74.359	ENSHCOG00000014827	polr2j	68	74.359	Hippocampus_comes
ENSODEG00000008559	-	100	75.214	ENSIPUG00000023960	polr2j	100	75.214	Ictalurus_punctatus
ENSODEG00000008559	-	100	76.923	ENSSTOG00000006377	POLR2J	100	76.923	Ictidomys_tridecemlineatus
ENSODEG00000008559	-	100	74.359	ENSJJAG00000018834	-	100	74.359	Jaculus_jaculus
ENSODEG00000008559	-	100	76.923	ENSJJAG00000013854	-	100	76.923	Jaculus_jaculus
ENSODEG00000008559	-	100	73.504	ENSKMAG00000014581	polr2j	79	73.504	Kryptolebias_marmoratus
ENSODEG00000008559	-	100	73.504	ENSLBEG00000005885	polr2j	100	73.504	Labrus_bergylta
ENSODEG00000008559	-	100	75.214	ENSLOCG00000001885	polr2j	89	75.214	Lepisosteus_oculatus
ENSODEG00000008559	-	100	76.923	ENSLAFG00000021507	-	100	76.923	Loxodonta_africana
ENSODEG00000008559	-	100	70.000	ENSMMUG00000012019	POLR2J	100	70.000	Macaca_mulatta
ENSODEG00000008559	-	100	73.504	ENSMAMG00000009374	polr2j	100	73.504	Mastacembelus_armatus
ENSODEG00000008559	-	100	73.504	ENSMZEG00005011932	polr2j	100	73.504	Maylandia_zebra
ENSODEG00000008559	-	100	76.923	ENSMGAG00000003534	POLR2J	100	76.923	Meleagris_gallopavo
ENSODEG00000008559	-	100	76.923	ENSMAUG00000013049	Polr2j	100	76.923	Mesocricetus_auratus
ENSODEG00000008559	-	75	71.111	ENSMICG00000026811	-	91	71.111	Microcebus_murinus
ENSODEG00000008559	-	100	76.923	ENSMOCG00000001294	Polr2j	100	76.923	Microtus_ochrogaster
ENSODEG00000008559	-	100	72.650	ENSMMOG00000013265	polr2j	100	72.650	Mola_mola
ENSODEG00000008559	-	100	70.312	ENSMODG00000013617	-	100	70.312	Monodelphis_domestica
ENSODEG00000008559	-	100	73.504	ENSMALG00000020749	polr2j	100	73.504	Monopterus_albus
ENSODEG00000008559	-	100	76.923	MGP_CAROLIEiJ_G0027851	Polr2j	100	76.923	Mus_caroli
ENSODEG00000008559	-	100	76.923	ENSMUSG00000039771	Polr2j	100	76.923	Mus_musculus
ENSODEG00000008559	-	100	76.923	MGP_PahariEiJ_G0024434	Polr2j	100	76.923	Mus_pahari
ENSODEG00000008559	-	100	76.923	MGP_SPRETEiJ_G0028853	Polr2j	100	76.923	Mus_spretus
ENSODEG00000008559	-	100	76.923	ENSMLUG00000010467	POLR2J	100	76.923	Myotis_lucifugus
ENSODEG00000008559	-	100	76.923	ENSNGAG00000023412	Polr2j	100	76.923	Nannospalax_galili
ENSODEG00000008559	-	63	67.105	ENSNBRG00000006580	polr2j	59	67.105	Neolamprologus_brichardi
ENSODEG00000008559	-	100	73.504	ENSONIG00000000259	polr2j	100	73.504	Oreochromis_niloticus
ENSODEG00000008559	-	100	74.359	ENSOANG00000020912	POLR2J	100	74.359	Ornithorhynchus_anatinus
ENSODEG00000008559	-	100	70.866	ENSOCUG00000023609	POLR2J	100	70.866	Oryctolagus_cuniculus
ENSODEG00000008559	-	100	73.504	ENSORLG00000029046	polr2j	83	73.504	Oryzias_latipes
ENSODEG00000008559	-	100	73.504	ENSORLG00020007625	polr2j	83	73.504	Oryzias_latipes_hni
ENSODEG00000008559	-	100	73.504	ENSORLG00015003457	polr2j	83	73.504	Oryzias_latipes_hsok
ENSODEG00000008559	-	100	72.650	ENSOMEG00000002097	polr2j	100	72.650	Oryzias_melastigma
ENSODEG00000008559	-	100	57.692	ENSOGAG00000008250	-	100	57.692	Otolemur_garnettii
ENSODEG00000008559	-	100	76.923	ENSOARG00000014204	-	98	76.923	Ovis_aries
ENSODEG00000008559	-	100	76.923	ENSPPRG00000012439	-	100	76.923	Panthera_pardus
ENSODEG00000008559	-	97	67.544	ENSPTIG00000018714	-	100	72.816	Panthera_tigris_altaica
ENSODEG00000008559	-	84	74.000	ENSPSIG00000010173	-	100	74.000	Pelodiscus_sinensis
ENSODEG00000008559	-	100	73.504	ENSPMGG00000021256	polr2j	100	73.504	Periophthalmus_magnuspinnatus
ENSODEG00000008559	-	100	76.923	ENSPEMG00000015733	Polr2j	100	76.923	Peromyscus_maniculatus_bairdii
ENSODEG00000008559	-	100	76.923	ENSPCIG00000009026	-	100	76.923	Phascolarctos_cinereus
ENSODEG00000008559	-	100	73.504	ENSPFOG00000012001	polr2j	99	73.504	Poecilia_formosa
ENSODEG00000008559	-	100	73.504	ENSPLAG00000014075	polr2j	100	73.504	Poecilia_latipinna
ENSODEG00000008559	-	100	73.504	ENSPMEG00000020585	polr2j	100	73.504	Poecilia_mexicana
ENSODEG00000008559	-	100	73.504	ENSPREG00000015255	polr2j	100	73.504	Poecilia_reticulata
ENSODEG00000008559	-	100	76.923	ENSPCOG00000024573	-	100	76.923	Propithecus_coquereli
ENSODEG00000008559	-	99	71.552	ENSPVAG00000017770	-	66	71.552	Pteropus_vampyrus
ENSODEG00000008559	-	100	73.504	ENSPNYG00000014832	polr2j	100	73.504	Pundamilia_nyererei
ENSODEG00000008559	-	100	73.504	ENSPNAG00000016595	polr2j	100	73.504	Pygocentrus_nattereri
ENSODEG00000008559	-	100	76.923	ENSRNOG00000001430	Polr2j	100	76.923	Rattus_norvegicus
ENSODEG00000008559	-	100	76.923	ENSSBOG00000025579	-	100	76.923	Saimiri_boliviensis_boliviensis
ENSODEG00000008559	-	78	67.857	ENSSHAG00000010443	-	99	67.857	Sarcophilus_harrisii
ENSODEG00000008559	-	93	73.394	ENSSFOG00015003371	polr2j	83	73.394	Scleropages_formosus
ENSODEG00000008559	-	100	73.504	ENSSMAG00000006729	polr2j	100	73.504	Scophthalmus_maximus
ENSODEG00000008559	-	100	73.504	ENSSDUG00000018490	polr2j	100	73.504	Seriola_dumerili
ENSODEG00000008559	-	100	73.504	ENSSLDG00000022354	polr2j	100	73.504	Seriola_lalandi_dorsalis
ENSODEG00000008559	-	100	76.923	ENSSPUG00000010802	-	100	76.923	Sphenodon_punctatus
ENSODEG00000008559	-	100	73.504	ENSSPAG00000021953	polr2j	100	73.504	Stegastes_partitus
ENSODEG00000008559	-	100	76.923	ENSSSCG00000007688	-	100	76.923	Sus_scrofa
ENSODEG00000008559	-	100	64.957	ENSSSCG00000003703	-	83	64.957	Sus_scrofa
ENSODEG00000008559	-	84	74.000	ENSTGUG00000004501	-	100	74.000	Taeniopygia_guttata
ENSODEG00000008559	-	62	82.090	ENSTGUG00000004510	-	97	82.090	Taeniopygia_guttata
ENSODEG00000008559	-	100	73.504	ENSTRUG00000020842	polr2j	100	73.504	Takifugu_rubripes
ENSODEG00000008559	-	100	73.504	ENSTNIG00000002994	polr2j	100	73.504	Tetraodon_nigroviridis
ENSODEG00000008559	-	91	67.290	ENSTBEG00000005797	-	70	67.290	Tupaia_belangeri
ENSODEG00000008559	-	100	76.923	ENSUAMG00000011310	-	100	76.923	Ursus_americanus
ENSODEG00000008559	-	100	76.923	ENSUMAG00000012594	-	100	76.923	Ursus_maritimus
ENSODEG00000008559	-	100	76.068	ENSXETG00000001108	polr2j	100	76.068	Xenopus_tropicalis
ENSODEG00000008559	-	100	73.504	ENSXMAG00000012422	polr2j	100	73.504	Xiphophorus_maculatus