EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000008682 (Gene tree)
Gene ID: 101573741
Gene Symbol: CPSF2
Alias: -
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 27917 bases
Position: chrJH651585.1:6573298-6601214
Accession: 101573741
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000011693	Beta-Casp	PF10996.8	8.5e-21	1	1
ENSODEP00000011693	Lactamase_B	PF00753.27	1.4e-06	1	1
ENSODEP00000011693	RMMBL	PF07521.12	1.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000011855	CPSF2-201	2378	XM_004635161	ENSODEP00000011693	782 (aa)	XP_004635218	UPI000333919E

Gene Model

Click here to download ENSODEG00000008682's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000008682's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000008682	CPSF2	100	99.361	ENSG00000165934	CPSF2	100	99.361	Homo_sapiens
ENSODEG00000008682	CPSF2	100	85.678	ENSAPOG00000001242	cpsf2	100	85.678	Acanthochromis_polyacanthus
ENSODEG00000008682	CPSF2	100	86.076	ENSACIG00000009331	cpsf2	100	86.076	Amphilophus_citrinellus
ENSODEG00000008682	CPSF2	100	85.805	ENSAOCG00000014095	cpsf2	100	85.805	Amphiprion_ocellaris
ENSODEG00000008682	CPSF2	100	85.805	ENSAPEG00000009158	cpsf2	100	85.805	Amphiprion_percula
ENSODEG00000008682	CPSF2	96	86.053	ENSATEG00000017644	cpsf2	100	84.307	Anabas_testudineus
ENSODEG00000008682	CPSF2	100	96.051	ENSAPLG00000006330	CPSF2	100	96.051	Anas_platyrhynchos
ENSODEG00000008682	CPSF2	100	94.764	ENSACAG00000009245	CPSF2	100	94.764	Anolis_carolinensis
ENSODEG00000008682	CPSF2	100	99.361	ENSANAG00000022915	CPSF2	100	99.361	Aotus_nancymaae
ENSODEG00000008682	CPSF2	100	85.388	ENSAMXG00000018696	cpsf2	100	85.388	Astyanax_mexicanus
ENSODEG00000008682	CPSF2	100	99.361	ENSBTAG00000010227	CPSF2	100	99.361	Bos_taurus
ENSODEG00000008682	CPSF2	100	41.686	WBGene00017313	cpsf-2	100	41.149	Caenorhabditis_elegans
ENSODEG00000008682	CPSF2	100	99.361	ENSCJAG00000018069	CPSF2	100	99.361	Callithrix_jacchus
ENSODEG00000008682	CPSF2	100	99.488	ENSCAFG00000010909	CPSF2	100	99.488	Canis_familiaris
ENSODEG00000008682	CPSF2	100	99.488	ENSCAFG00020020670	CPSF2	100	99.488	Canis_lupus_dingo
ENSODEG00000008682	CPSF2	100	99.361	ENSCHIG00000023848	CPSF2	100	99.361	Capra_hircus
ENSODEG00000008682	CPSF2	100	98.465	ENSTSYG00000009036	CPSF2	100	98.465	Carlito_syrichta
ENSODEG00000008682	CPSF2	100	99.616	ENSCPOG00000010899	CPSF2	100	99.616	Cavia_porcellus
ENSODEG00000008682	CPSF2	100	99.361	ENSCCAG00000028088	CPSF2	100	99.361	Cebus_capucinus
ENSODEG00000008682	CPSF2	100	99.488	ENSCATG00000030132	CPSF2	100	99.488	Cercocebus_atys
ENSODEG00000008682	CPSF2	100	99.488	ENSCLAG00000012404	CPSF2	100	99.488	Chinchilla_lanigera
ENSODEG00000008682	CPSF2	100	99.488	ENSCSAG00000011300	CPSF2	100	99.488	Chlorocebus_sabaeus
ENSODEG00000008682	CPSF2	100	92.455	ENSCHOG00000012904	CPSF2	100	92.455	Choloepus_hoffmanni
ENSODEG00000008682	CPSF2	100	96.424	ENSCPBG00000008766	CPSF2	97	96.424	Chrysemys_picta_bellii
ENSODEG00000008682	CPSF2	100	54.545	ENSCING00000007881	-	100	54.172	Ciona_intestinalis
ENSODEG00000008682	CPSF2	94	99.590	ENSCANG00000041651	CPSF2	100	99.590	Colobus_angolensis_palliatus
ENSODEG00000008682	CPSF2	100	98.593	ENSCGRG00001006901	Cpsf2	100	98.593	Cricetulus_griseus_chok1gshd
ENSODEG00000008682	CPSF2	100	98.593	ENSCGRG00000012416	Cpsf2	100	98.593	Cricetulus_griseus_crigri
ENSODEG00000008682	CPSF2	100	83.777	ENSCSEG00000004116	cpsf2	100	83.777	Cynoglossus_semilaevis
ENSODEG00000008682	CPSF2	100	85.044	ENSCVAG00000000095	cpsf2	100	85.171	Cyprinodon_variegatus
ENSODEG00000008682	CPSF2	100	85.316	ENSDARG00000028971	cpsf2	100	85.316	Danio_rerio
ENSODEG00000008682	CPSF2	100	99.488	ENSDNOG00000042757	CPSF2	100	99.488	Dasypus_novemcinctus
ENSODEG00000008682	CPSF2	100	99.233	ENSDORG00000013709	Cpsf2	100	99.233	Dipodomys_ordii
ENSODEG00000008682	CPSF2	100	53.923	FBgn0027873	Cpsf100	100	53.808	Drosophila_melanogaster
ENSODEG00000008682	CPSF2	100	90.805	ENSETEG00000012123	CPSF2	100	90.805	Echinops_telfairi
ENSODEG00000008682	CPSF2	52	76.471	ENSEBUG00000012098	cpsf2	93	76.471	Eptatretus_burgeri
ENSODEG00000008682	CPSF2	91	96.928	ENSEASG00005021193	CPSF2	100	96.928	Equus_asinus_asinus
ENSODEG00000008682	CPSF2	100	99.361	ENSECAG00000023935	CPSF2	100	99.361	Equus_caballus
ENSODEG00000008682	CPSF2	100	83.814	ENSELUG00000008442	cpsf2	100	83.814	Esox_lucius
ENSODEG00000008682	CPSF2	100	99.361	ENSFCAG00000007886	CPSF2	100	99.361	Felis_catus
ENSODEG00000008682	CPSF2	100	96.296	ENSFALG00000002412	CPSF2	100	96.296	Ficedula_albicollis
ENSODEG00000008682	CPSF2	100	99.488	ENSFDAG00000006327	CPSF2	100	99.488	Fukomys_damarensis
ENSODEG00000008682	CPSF2	96	84.314	ENSFHEG00000015465	cpsf2	98	84.575	Fundulus_heteroclitus
ENSODEG00000008682	CPSF2	100	83.333	ENSGMOG00000008761	cpsf2	100	83.333	Gadus_morhua
ENSODEG00000008682	CPSF2	100	95.530	ENSGALG00000010783	CPSF2	100	96.041	Gallus_gallus
ENSODEG00000008682	CPSF2	100	85.298	ENSGAFG00000001407	cpsf2	100	85.298	Gambusia_affinis
ENSODEG00000008682	CPSF2	100	84.411	ENSGACG00000008418	cpsf2	100	84.411	Gasterosteus_aculeatus
ENSODEG00000008682	CPSF2	100	96.552	ENSGAGG00000008287	CPSF2	100	96.552	Gopherus_agassizii
ENSODEG00000008682	CPSF2	100	99.361	ENSGGOG00000011799	CPSF2	100	99.361	Gorilla_gorilla
ENSODEG00000008682	CPSF2	100	85.171	ENSHBUG00000023466	cpsf2	100	85.171	Haplochromis_burtoni
ENSODEG00000008682	CPSF2	100	99.361	ENSHGLG00000018311	CPSF2	100	99.361	Heterocephalus_glaber_female
ENSODEG00000008682	CPSF2	100	99.361	ENSHGLG00100016460	CPSF2	100	99.361	Heterocephalus_glaber_male
ENSODEG00000008682	CPSF2	100	84.411	ENSHCOG00000019527	cpsf2	98	84.411	Hippocampus_comes
ENSODEG00000008682	CPSF2	100	85.642	ENSIPUG00000020857	cpsf2	100	85.642	Ictalurus_punctatus
ENSODEG00000008682	CPSF2	100	99.488	ENSSTOG00000009528	CPSF2	100	99.488	Ictidomys_tridecemlineatus
ENSODEG00000008682	CPSF2	100	99.105	ENSJJAG00000017925	Cpsf2	100	99.105	Jaculus_jaculus
ENSODEG00000008682	CPSF2	100	84.537	ENSKMAG00000019429	cpsf2	100	84.537	Kryptolebias_marmoratus
ENSODEG00000008682	CPSF2	95	83.936	ENSLBEG00000011585	cpsf2	100	84.091	Labrus_bergylta
ENSODEG00000008682	CPSF2	100	89.527	ENSLACG00000019024	CPSF2	100	89.783	Latimeria_chalumnae
ENSODEG00000008682	CPSF2	100	87.452	ENSLOCG00000014102	cpsf2	100	87.452	Lepisosteus_oculatus
ENSODEG00000008682	CPSF2	100	99.107	ENSLAFG00000004891	CPSF2	100	99.107	Loxodonta_africana
ENSODEG00000008682	CPSF2	100	99.488	ENSMFAG00000041212	CPSF2	100	99.488	Macaca_fascicularis
ENSODEG00000008682	CPSF2	100	99.488	ENSMMUG00000000699	CPSF2	100	99.488	Macaca_mulatta
ENSODEG00000008682	CPSF2	100	99.488	ENSMNEG00000031584	CPSF2	100	99.488	Macaca_nemestrina
ENSODEG00000008682	CPSF2	100	99.488	ENSMLEG00000029394	CPSF2	100	99.488	Mandrillus_leucophaeus
ENSODEG00000008682	CPSF2	100	85.678	ENSMAMG00000004235	cpsf2	100	85.678	Mastacembelus_armatus
ENSODEG00000008682	CPSF2	100	85.298	ENSMZEG00005001769	cpsf2	100	85.298	Maylandia_zebra
ENSODEG00000008682	CPSF2	100	95.536	ENSMGAG00000013122	CPSF2	100	96.046	Meleagris_gallopavo
ENSODEG00000008682	CPSF2	100	98.593	ENSMAUG00000015160	Cpsf2	100	98.593	Mesocricetus_auratus
ENSODEG00000008682	CPSF2	100	99.616	ENSMICG00000016441	CPSF2	100	99.616	Microcebus_murinus
ENSODEG00000008682	CPSF2	100	98.593	ENSMOCG00000015372	Cpsf2	100	98.593	Microtus_ochrogaster
ENSODEG00000008682	CPSF2	100	80.989	ENSMMOG00000015590	cpsf2	100	80.989	Mola_mola
ENSODEG00000008682	CPSF2	100	98.977	ENSMODG00000002042	CPSF2	100	98.977	Monodelphis_domestica
ENSODEG00000008682	CPSF2	100	82.636	ENSMALG00000022275	cpsf2	100	82.636	Monopterus_albus
ENSODEG00000008682	CPSF2	100	98.210	ENSMUSG00000041781	Cpsf2	100	98.210	Mus_musculus
ENSODEG00000008682	CPSF2	100	98.465	MGP_PahariEiJ_G0029791	Cpsf2	100	98.465	Mus_pahari
ENSODEG00000008682	CPSF2	100	98.210	MGP_SPRETEiJ_G0018877	Cpsf2	100	98.210	Mus_spretus
ENSODEG00000008682	CPSF2	100	99.488	ENSMPUG00000007617	CPSF2	98	99.488	Mustela_putorius_furo
ENSODEG00000008682	CPSF2	100	98.849	ENSMLUG00000005570	CPSF2	100	98.849	Myotis_lucifugus
ENSODEG00000008682	CPSF2	100	99.105	ENSNGAG00000020312	Cpsf2	100	99.105	Nannospalax_galili
ENSODEG00000008682	CPSF2	100	85.678	ENSNBRG00000022402	cpsf2	100	85.678	Neolamprologus_brichardi
ENSODEG00000008682	CPSF2	100	98.465	ENSNLEG00000017132	CPSF2	100	98.465	Nomascus_leucogenys
ENSODEG00000008682	CPSF2	91	99.029	ENSMEUG00000008138	CPSF2	91	99.029	Notamacropus_eugenii
ENSODEG00000008682	CPSF2	94	91.530	ENSOPRG00000008484	-	100	91.530	Ochotona_princeps
ENSODEG00000008682	CPSF2	100	85.932	ENSONIG00000005901	cpsf2	100	85.932	Oreochromis_niloticus
ENSODEG00000008682	CPSF2	100	98.338	ENSOANG00000003822	CPSF2	100	98.338	Ornithorhynchus_anatinus
ENSODEG00000008682	CPSF2	100	99.105	ENSOCUG00000005713	CPSF2	100	99.105	Oryctolagus_cuniculus
ENSODEG00000008682	CPSF2	100	79.848	ENSORLG00000011628	cpsf2	100	79.848	Oryzias_latipes
ENSODEG00000008682	CPSF2	100	84.664	ENSORLG00020016980	cpsf2	100	84.664	Oryzias_latipes_hni
ENSODEG00000008682	CPSF2	100	84.664	ENSORLG00015011910	cpsf2	100	84.664	Oryzias_latipes_hsok
ENSODEG00000008682	CPSF2	100	83.904	ENSOMEG00000022876	cpsf2	100	83.904	Oryzias_melastigma
ENSODEG00000008682	CPSF2	100	96.301	ENSOARG00000012889	CPSF2	100	96.301	Ovis_aries
ENSODEG00000008682	CPSF2	100	99.361	ENSPPAG00000039666	CPSF2	100	99.361	Pan_paniscus
ENSODEG00000008682	CPSF2	99	99.360	ENSPPRG00000010869	CPSF2	100	99.360	Panthera_pardus
ENSODEG00000008682	CPSF2	100	99.361	ENSPTIG00000021202	CPSF2	100	99.361	Panthera_tigris_altaica
ENSODEG00000008682	CPSF2	100	99.361	ENSPTRG00000006651	CPSF2	100	99.361	Pan_troglodytes
ENSODEG00000008682	CPSF2	100	99.488	ENSPANG00000017417	CPSF2	100	99.488	Papio_anubis
ENSODEG00000008682	CPSF2	100	81.830	ENSPKIG00000021453	cpsf2	100	81.830	Paramormyrops_kingsleyae
ENSODEG00000008682	CPSF2	100	95.658	ENSPSIG00000006289	CPSF2	100	95.658	Pelodiscus_sinensis
ENSODEG00000008682	CPSF2	76	79.568	ENSPMGG00000002511	cpsf2	100	79.734	Periophthalmus_magnuspinnatus
ENSODEG00000008682	CPSF2	100	98.849	ENSPEMG00000007917	Cpsf2	100	98.849	Peromyscus_maniculatus_bairdii
ENSODEG00000008682	CPSF2	100	74.210	ENSPMAG00000006205	cpsf2	100	74.210	Petromyzon_marinus
ENSODEG00000008682	CPSF2	100	98.977	ENSPCIG00000011393	CPSF2	100	98.977	Phascolarctos_cinereus
ENSODEG00000008682	CPSF2	100	85.171	ENSPFOG00000018648	cpsf2	100	85.171	Poecilia_formosa
ENSODEG00000008682	CPSF2	100	85.171	ENSPLAG00000019199	cpsf2	99	85.171	Poecilia_latipinna
ENSODEG00000008682	CPSF2	96	85.526	ENSPMEG00000012100	cpsf2	100	84.893	Poecilia_mexicana
ENSODEG00000008682	CPSF2	100	85.044	ENSPREG00000008960	cpsf2	100	85.044	Poecilia_reticulata
ENSODEG00000008682	CPSF2	63	99.395	ENSPPYG00000029685	-	100	99.395	Pongo_abelii
ENSODEG00000008682	CPSF2	100	98.977	ENSPCAG00000012477	CPSF2	100	98.977	Procavia_capensis
ENSODEG00000008682	CPSF2	100	99.361	ENSPCOG00000026387	CPSF2	100	99.361	Propithecus_coquereli
ENSODEG00000008682	CPSF2	65	100.000	ENSPVAG00000004223	CPSF2	65	100.000	Pteropus_vampyrus
ENSODEG00000008682	CPSF2	100	85.316	ENSPNYG00000023356	cpsf2	100	85.316	Pundamilia_nyererei
ENSODEG00000008682	CPSF2	100	86.531	ENSPNAG00000001849	cpsf2	100	86.531	Pygocentrus_nattereri
ENSODEG00000008682	CPSF2	100	98.593	ENSRNOG00000005733	Cpsf2	100	98.593	Rattus_norvegicus
ENSODEG00000008682	CPSF2	100	99.488	ENSRBIG00000044792	CPSF2	100	99.488	Rhinopithecus_bieti
ENSODEG00000008682	CPSF2	100	99.488	ENSRROG00000034875	CPSF2	100	99.488	Rhinopithecus_roxellana
ENSODEG00000008682	CPSF2	100	99.361	ENSSBOG00000024571	CPSF2	100	99.361	Saimiri_boliviensis_boliviensis
ENSODEG00000008682	CPSF2	100	99.105	ENSSHAG00000010458	CPSF2	100	99.105	Sarcophilus_harrisii
ENSODEG00000008682	CPSF2	100	87.039	ENSSFOG00015002117	cpsf2	100	87.039	Scleropages_formosus
ENSODEG00000008682	CPSF2	100	83.904	ENSSMAG00000002001	cpsf2	100	83.904	Scophthalmus_maximus
ENSODEG00000008682	CPSF2	100	86.058	ENSSDUG00000004084	cpsf2	100	86.058	Seriola_dumerili
ENSODEG00000008682	CPSF2	100	85.551	ENSSLDG00000024330	cpsf2	100	85.551	Seriola_lalandi_dorsalis
ENSODEG00000008682	CPSF2	58	100.000	ENSSARG00000009784	-	63	100.000	Sorex_araneus
ENSODEG00000008682	CPSF2	100	95.785	ENSSPUG00000013485	CPSF2	100	95.785	Sphenodon_punctatus
ENSODEG00000008682	CPSF2	100	85.044	ENSSPAG00000013284	cpsf2	100	85.044	Stegastes_partitus
ENSODEG00000008682	CPSF2	100	99.361	ENSSSCG00000002447	CPSF2	100	99.361	Sus_scrofa
ENSODEG00000008682	CPSF2	100	96.424	ENSTGUG00000012571	-	100	96.424	Taeniopygia_guttata
ENSODEG00000008682	CPSF2	100	84.411	ENSTRUG00000003742	cpsf2	100	84.411	Takifugu_rubripes
ENSODEG00000008682	CPSF2	100	83.312	ENSTNIG00000012228	cpsf2	100	84.071	Tetraodon_nigroviridis
ENSODEG00000008682	CPSF2	91	100.000	ENSTBEG00000004530	CPSF2	94	100.000	Tupaia_belangeri
ENSODEG00000008682	CPSF2	88	98.445	ENSTTRG00000008697	CPSF2	88	98.445	Tursiops_truncatus
ENSODEG00000008682	CPSF2	100	99.616	ENSUAMG00000028071	CPSF2	100	99.616	Ursus_americanus
ENSODEG00000008682	CPSF2	100	99.616	ENSUMAG00000005029	CPSF2	100	99.616	Ursus_maritimus
ENSODEG00000008682	CPSF2	99	99.488	ENSVPAG00000003503	CPSF2	100	99.488	Vicugna_pacos
ENSODEG00000008682	CPSF2	100	99.488	ENSVVUG00000024642	CPSF2	100	99.488	Vulpes_vulpes
ENSODEG00000008682	CPSF2	100	92.082	ENSXETG00000010289	cpsf2	100	92.082	Xenopus_tropicalis
ENSODEG00000008682	CPSF2	100	85.551	ENSXCOG00000001764	cpsf2	100	85.551	Xiphophorus_couchianus
ENSODEG00000008682	CPSF2	100	85.678	ENSXMAG00000017048	cpsf2	100	85.678	Xiphophorus_maculatus