EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000008916 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 1332 bases
Position: chrJH651587.1:3405118-3406449
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000012023	RRM_1	PF00076.22	7.8e-23	1	2
ENSODEP00000012023	RRM_1	PF00076.22	7.8e-23	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000012187	-	1047	-	ENSODEP00000012023	348 (aa)	-	-

Gene Model

Click here to download ENSODEG00000008916's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000008916's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000008916	-	82	67.647	ENSODEG00000003597	-	100	64.508

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000008916	-	84	71.827	ENSG00000143368	SF3B4	99	76.190	Homo_sapiens
ENSODEG00000008916	-	55	76.415	ENSAPOG00000017647	sf3b4	91	59.043	Acanthochromis_polyacanthus
ENSODEG00000008916	-	55	76.303	ENSACIG00000018455	sf3b4	70	70.763	Amphilophus_citrinellus
ENSODEG00000008916	-	55	76.415	ENSAOCG00000019801	sf3b4	91	59.043	Amphiprion_ocellaris
ENSODEG00000008916	-	55	76.415	ENSAPEG00000010365	sf3b4	91	59.043	Amphiprion_percula
ENSODEG00000008916	-	55	76.415	ENSATEG00000012844	sf3b4	91	57.937	Anabas_testudineus
ENSODEG00000008916	-	55	76.415	ENSACAG00000010019	SF3B4	88	65.416	Anolis_carolinensis
ENSODEG00000008916	-	84	71.827	ENSANAG00000031025	SF3B4	88	72.922	Aotus_nancymaae
ENSODEG00000008916	-	60	70.886	ENSACLG00000014260	sf3b4	91	59.524	Astatotilapia_calliptera
ENSODEG00000008916	-	55	76.415	ENSAMXG00000008282	sf3b4	86	60.224	Astyanax_mexicanus
ENSODEG00000008916	-	78	62.143	ENSCHIG00000006654	-	70	61.837	Capra_hircus
ENSODEG00000008916	-	84	71.827	ENSTSYG00000009295	SF3B4	88	72.922	Carlito_syrichta
ENSODEG00000008916	-	72	59.191	ENSCAPG00000006451	SF3B4	97	57.878	Cavia_aperea
ENSODEG00000008916	-	55	75.943	ENSCCAG00000021751	-	78	67.671	Cebus_capucinus
ENSODEG00000008916	-	82	69.935	ENSCCAG00000019823	-	86	66.022	Cebus_capucinus
ENSODEG00000008916	-	84	71.827	ENSCATG00000033114	SF3B4	88	72.922	Cercocebus_atys
ENSODEG00000008916	-	84	71.827	ENSCSAG00000018129	SF3B4	88	72.922	Chlorocebus_sabaeus
ENSODEG00000008916	-	55	76.415	ENSCPBG00000008041	SF3B4	91	63.896	Chrysemys_picta_bellii
ENSODEG00000008916	-	55	69.340	ENSCING00000002337	-	55	70.000	Ciona_intestinalis
ENSODEG00000008916	-	84	71.827	ENSCANG00000035579	SF3B4	88	72.922	Colobus_angolensis_palliatus
ENSODEG00000008916	-	55	76.415	ENSCSEG00000015258	sf3b4	75	57.412	Cynoglossus_semilaevis
ENSODEG00000008916	-	55	74.429	ENSCVAG00000005536	sf3b4	92	58.333	Cyprinodon_variegatus
ENSODEG00000008916	-	55	76.415	ENSDARG00000018574	sf3b4	87	60.446	Danio_rerio
ENSODEG00000008916	-	97	58.065	ENSDNOG00000037231	-	86	64.607	Dasypus_novemcinctus
ENSODEG00000008916	-	54	66.977	FBgn0015818	Spx	62	66.977	Drosophila_melanogaster
ENSODEG00000008916	-	55	76.415	ENSELUG00000012876	sf3b4	86	59.673	Esox_lucius
ENSODEG00000008916	-	55	76.415	ENSFHEG00000008211	sf3b4	52	58.602	Fundulus_heteroclitus
ENSODEG00000008916	-	55	75.943	ENSGMOG00000002519	sf3b4	70	70.588	Gadus_morhua
ENSODEG00000008916	-	55	76.415	ENSGALG00000013352	SF3B4	91	64.062	Gallus_gallus
ENSODEG00000008916	-	55	76.415	ENSGAFG00000010181	sf3b4	91	57.560	Gambusia_affinis
ENSODEG00000008916	-	55	76.415	ENSGACG00000003819	sf3b4	87	59.116	Gasterosteus_aculeatus
ENSODEG00000008916	-	55	76.415	ENSGAGG00000025055	SF3B4	76	65.312	Gopherus_agassizii
ENSODEG00000008916	-	84	63.407	ENSGGOG00000038845	-	96	57.216	Gorilla_gorilla
ENSODEG00000008916	-	84	71.827	ENSGGOG00000004761	SF3B4	88	72.922	Gorilla_gorilla
ENSODEG00000008916	-	60	70.886	ENSHBUG00000002028	sf3b4	91	59.524	Haplochromis_burtoni
ENSODEG00000008916	-	55	76.415	ENSHGLG00100008533	SF3B4	88	71.314	Heterocephalus_glaber_male
ENSODEG00000008916	-	55	76.415	ENSHCOG00000003014	sf3b4	91	55.440	Hippocampus_comes
ENSODEG00000008916	-	52	79.793	ENSIPUG00000012242	Sf3b4	89	60.976	Ictalurus_punctatus
ENSODEG00000008916	-	50	66.304	ENSSTOG00000029627	-	81	60.452	Ictidomys_tridecemlineatus
ENSODEG00000008916	-	55	76.415	ENSKMAG00000008154	sf3b4	92	57.979	Kryptolebias_marmoratus
ENSODEG00000008916	-	55	76.415	ENSLBEG00000026818	sf3b4	91	59.259	Labrus_bergylta
ENSODEG00000008916	-	55	75.472	ENSLACG00000004436	SF3B4	100	59.946	Latimeria_chalumnae
ENSODEG00000008916	-	55	76.415	ENSLOCG00000009048	sf3b4	88	59.200	Lepisosteus_oculatus
ENSODEG00000008916	-	55	76.415	ENSLAFG00000008531	SF3B4	88	72.727	Loxodonta_africana
ENSODEG00000008916	-	84	71.827	ENSMFAG00000042395	SF3B4	88	72.922	Macaca_fascicularis
ENSODEG00000008916	-	82	58.923	ENSMFAG00000039067	-	90	54.190	Macaca_fascicularis
ENSODEG00000008916	-	84	71.827	ENSMMUG00000007256	SF3B4	88	72.922	Macaca_mulatta
ENSODEG00000008916	-	84	71.827	ENSMNEG00000031839	SF3B4	88	72.922	Macaca_nemestrina
ENSODEG00000008916	-	82	58.923	ENSMNEG00000031526	-	88	54.958	Macaca_nemestrina
ENSODEG00000008916	-	84	71.827	ENSMLEG00000038667	SF3B4	88	72.922	Mandrillus_leucophaeus
ENSODEG00000008916	-	60	71.730	ENSMAMG00000014692	sf3b4	91	58.201	Mastacembelus_armatus
ENSODEG00000008916	-	60	70.886	ENSMZEG00005026741	sf3b4	91	59.524	Maylandia_zebra
ENSODEG00000008916	-	55	76.415	ENSMGAG00000000653	SF3B4	91	63.802	Meleagris_gallopavo
ENSODEG00000008916	-	55	76.415	ENSMMOG00000018032	sf3b4	90	56.800	Mola_mola
ENSODEG00000008916	-	84	71.827	ENSMODG00000018767	SF3B4	88	72.922	Monodelphis_domestica
ENSODEG00000008916	-	55	76.415	ENSMALG00000006174	sf3b4	91	58.047	Monopterus_albus
ENSODEG00000008916	-	55	76.415	ENSNBRG00000013865	sf3b4	91	58.090	Neolamprologus_brichardi
ENSODEG00000008916	-	98	64.171	ENSNLEG00000000537	-	94	64.533	Nomascus_leucogenys
ENSODEG00000008916	-	51	91.176	ENSMEUG00000003272	SF3B4	71	75.460	Notamacropus_eugenii
ENSODEG00000008916	-	60	70.464	ENSONIG00000002730	sf3b4	91	59.259	Oreochromis_niloticus
ENSODEG00000008916	-	55	76.415	ENSORLG00000003062	sf3b4	89	58.939	Oryzias_latipes
ENSODEG00000008916	-	55	76.415	ENSORLG00020000687	sf3b4	89	58.378	Oryzias_latipes_hni
ENSODEG00000008916	-	55	76.415	ENSORLG00015010989	sf3b4	89	58.378	Oryzias_latipes_hsok
ENSODEG00000008916	-	55	76.415	ENSOMEG00000013694	sf3b4	91	57.256	Oryzias_melastigma
ENSODEG00000008916	-	92	60.983	ENSOARG00000007368	-	85	61.494	Ovis_aries
ENSODEG00000008916	-	82	70.724	ENSPPAG00000030024	-	95	61.323	Pan_paniscus
ENSODEG00000008916	-	84	71.827	ENSPPAG00000040904	SF3B4	88	72.922	Pan_paniscus
ENSODEG00000008916	-	84	71.827	ENSPTRG00000001243	SF3B4	88	72.922	Pan_troglodytes
ENSODEG00000008916	-	84	66.254	ENSPTRG00000049727	-	100	56.553	Pan_troglodytes
ENSODEG00000008916	-	84	71.827	ENSPANG00000005126	SF3B4	88	72.922	Papio_anubis
ENSODEG00000008916	-	55	76.415	ENSPKIG00000020669	sf3b4	92	61.111	Paramormyrops_kingsleyae
ENSODEG00000008916	-	75	61.029	ENSPSIG00000009565	SF3B4	92	57.860	Pelodiscus_sinensis
ENSODEG00000008916	-	55	72.642	ENSPMAG00000007842	-	89	55.039	Petromyzon_marinus
ENSODEG00000008916	-	84	71.827	ENSPCIG00000008765	SF3B4	88	72.922	Phascolarctos_cinereus
ENSODEG00000008916	-	55	76.415	ENSPFOG00000005754	sf3b4	91	56.764	Poecilia_formosa
ENSODEG00000008916	-	55	76.415	ENSPLAG00000001401	sf3b4	95	57.500	Poecilia_latipinna
ENSODEG00000008916	-	55	76.415	ENSPMEG00000014452	sf3b4	52	56.764	Poecilia_mexicana
ENSODEG00000008916	-	55	76.415	ENSPREG00000011076	sf3b4	83	57.681	Poecilia_reticulata
ENSODEG00000008916	-	54	75.238	ENSPCAG00000000392	SF3B4	50	75.238	Procavia_capensis
ENSODEG00000008916	-	60	70.886	ENSPNYG00000012700	sf3b4	91	59.524	Pundamilia_nyererei
ENSODEG00000008916	-	55	76.415	ENSPNAG00000000686	sf3b4	90	60.165	Pygocentrus_nattereri
ENSODEG00000008916	-	84	71.827	ENSRBIG00000043392	SF3B4	88	72.922	Rhinopithecus_bieti
ENSODEG00000008916	-	84	71.827	ENSRROG00000029366	SF3B4	88	72.922	Rhinopithecus_roxellana
ENSODEG00000008916	-	93	60.671	ENSRROG00000028213	-	84	60.790	Rhinopithecus_roxellana
ENSODEG00000008916	-	93	58.127	ENSSBOG00000025174	-	79	63.333	Saimiri_boliviensis_boliviensis
ENSODEG00000008916	-	84	71.517	ENSSBOG00000012310	-	88	72.654	Saimiri_boliviensis_boliviensis
ENSODEG00000008916	-	84	72.930	ENSSHAG00000004043	SF3B4	88	73.901	Sarcophilus_harrisii
ENSODEG00000008916	-	55	76.415	ENSSFOG00015008864	sf3b4	88	60.484	Scleropages_formosus
ENSODEG00000008916	-	55	76.415	ENSSMAG00000006837	sf3b4	91	57.895	Scophthalmus_maximus
ENSODEG00000008916	-	55	76.415	ENSSDUG00000012064	sf3b4	91	57.937	Seriola_dumerili
ENSODEG00000008916	-	55	76.415	ENSSLDG00000014226	sf3b4	91	57.937	Seriola_lalandi_dorsalis
ENSODEG00000008916	-	63	70.248	ENSSPUG00000001028	SF3B4	87	59.299	Sphenodon_punctatus
ENSODEG00000008916	-	55	76.415	ENSSPAG00000019219	sf3b4	91	58.355	Stegastes_partitus
ENSODEG00000008916	-	85	54.072	ENSSSCG00000039440	-	100	50.532	Sus_scrofa
ENSODEG00000008916	-	55	76.415	ENSTGUG00000004470	SF3B4	93	72.034	Taeniopygia_guttata
ENSODEG00000008916	-	55	76.415	ENSTRUG00000004516	sf3b4	89	58.133	Takifugu_rubripes
ENSODEG00000008916	-	55	76.415	ENSTNIG00000009156	sf3b4	89	57.453	Tetraodon_nigroviridis
ENSODEG00000008916	-	55	76.415	ENSVVUG00000007732	-	100	69.211	Vulpes_vulpes
ENSODEG00000008916	-	52	79.793	ENSXETG00000011038	sf3b4	87	62.178	Xenopus_tropicalis
ENSODEG00000008916	-	55	76.415	ENSXCOG00000019895	sf3b4	92	57.560	Xiphophorus_couchianus
ENSODEG00000008916	-	55	76.415	ENSXMAG00000003772	sf3b4	92	57.560	Xiphophorus_maculatus