EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000009001 (Gene tree)
Gene ID: 101578851
Gene Symbol: -
Alias: -
Full Name: factor interacting with PAPOLA and CPSF1
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 92293 bases
Position: chrJH651534.1:18808413-18900705
Accession: 101578851
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000012131	Fip1	PF05182.13	6.9e-25	1	1
ENSODEP00000012132	Fip1	PF05182.13	7.4e-25	1	1
ENSODEP00000012133	Fip1	PF05182.13	8.2e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000012298	-	2073	XM_004627503	ENSODEP00000012133	580 (aa)	XP_004627561	UPI000333BC6A
ENSODET00000012296	-	1697	-	ENSODEP00000012131	508 (aa)	-	-
ENSODET00000012297	-	1999	XM_004627507	ENSODEP00000012132	535 (aa)	XP_004627564	UPI000333BC5C

Gene Model

Click here to download ENSODEG00000009001's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000009001's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000009001	-	100	97.079	ENSCAFG00000002034	FIP1L1	100	97.079	Canis_familiaris
ENSODEG00000009001	-	98	98.798	ENSCCAG00000021687	FIP1L1	100	96.262	Cebus_capucinus
ENSODEG00000009001	-	98	98.597	ENSCATG00000041740	FIP1L1	100	96.262	Cercocebus_atys
ENSODEG00000009001	-	100	98.621	ENSCLAG00000003675	-	100	98.621	Chinchilla_lanigera
ENSODEG00000009001	-	98	98.998	ENSFCAG00000022148	FIP1L1	100	96.075	Felis_catus
ENSODEG00000009001	-	91	75.899	ENSFALG00000003360	-	98	76.439	Ficedula_albicollis
ENSODEG00000009001	-	100	99.655	ENSFDAG00000012324	-	100	99.655	Fukomys_damarensis
ENSODEG00000009001	-	100	99.138	ENSSTOG00000012166	FIP1L1	100	99.138	Ictidomys_tridecemlineatus
ENSODEG00000009001	-	100	96.724	ENSJJAG00000013826	-	100	96.724	Jaculus_jaculus
ENSODEG00000009001	-	98	97.244	ENSMPUG00000005800	FIP1L1	100	95.191	Mustela_putorius_furo
ENSODEG00000009001	-	100	96.923	ENSMLUG00000006503	-	100	96.923	Myotis_lucifugus
ENSODEG00000009001	-	100	95.191	ENSPPAG00000029594	FIP1L1	100	95.191	Pan_paniscus
ENSODEG00000009001	-	90	83.818	ENSPSIG00000005407	-	100	84.545	Pelodiscus_sinensis
ENSODEG00000009001	-	98	97.244	ENSVVUG00000024895	FIP1L1	100	95.191	Vulpes_vulpes