EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSODEG00000009038 (Gene tree)
Gene ID
101566700
Gene Symbol
RPA1
Alias
-
Full Name
replication protein A1
Gene Type
protein_coding
Species
Octodon_degus
Status
putative
Strand
Minus strand
Length
53162 bases
Position
chrJH651587.1:1483167-1536328
Accession
101566700
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSODEP00000012179tRNA_anti-codonPF01336.254.9e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSODET00000012345RPA1-2011860XM_004635470ENSODEP00000012179619 (aa)XP_004635527-
Gene Model
Click here to download ENSODEG00000009038's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000009038's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSODEG00000009038RPA19657.485ENSAPOG00000019409RPA19457.485Acanthochromis_polyacanthus
ENSODEG00000009038RPA19661.745ENSAPOG00000011658rpa19961.121Acanthochromis_polyacanthus
ENSODEG00000009038RPA19685.067ENSAMEG00000007706RPA19585.067Ailuropoda_melanoleuca
ENSODEG00000009038RPA19657.763ENSACIG00000012881RPA19957.763Amphilophus_citrinellus
ENSODEG00000009038RPA19756.689ENSACIG00000007277rpa19956.689Amphilophus_citrinellus
ENSODEG00000009038RPA19663.317ENSAOCG00000023376rpa19962.479Amphiprion_ocellaris
ENSODEG00000009038RPA19654.880ENSAOCG00000009003RPA19654.880Amphiprion_ocellaris
ENSODEG00000009038RPA19663.149ENSAPEG00000008634rpa19962.309Amphiprion_percula
ENSODEG00000009038RPA19653.906ENSAPEG00000019132RPA19653.906Amphiprion_percula
ENSODEG00000009038RPA19662.375ENSATEG00000022024rpa19962.375Anabas_testudineus
ENSODEG00000009038RPA19655.821ENSATEG00000006443RPA19655.821Anabas_testudineus
ENSODEG00000009038RPA19664.083ENSAPLG00000012442RPA19864.382Anas_platyrhynchos
ENSODEG00000009038RPA19661.960ENSACAG00000014490RPA19562.126Anolis_carolinensis
ENSODEG00000009038RPA19686.935ENSANAG00000023456RPA19886.935Aotus_nancymaae
ENSODEG00000009038RPA19657.468ENSACLG00000005223RPA19657.468Astatotilapia_calliptera
ENSODEG00000009038RPA19462.329ENSACLG00000006640rpa19962.329Astatotilapia_calliptera
ENSODEG00000009038RPA19661.745ENSAMXG00000008418rpa19960.100Astyanax_mexicanus
ENSODEG00000009038RPA110082.720ENSBTAG00000009711RPA110082.720Bos_taurus
ENSODEG00000009038RPA19687.270ENSCJAG00000001848RPA19587.270Callithrix_jacchus
ENSODEG00000009038RPA110082.720ENSCAFG00000019249RPA110082.720Canis_familiaris
ENSODEG00000009038RPA110082.720ENSCAFG00020009847RPA110082.720Canis_lupus_dingo
ENSODEG00000009038RPA110083.200ENSCHIG00000026308RPA110083.200Capra_hircus
ENSODEG00000009038RPA19686.622ENSTSYG00000003482-9586.622Carlito_syrichta
ENSODEG00000009038RPA19691.960ENSCPOG00000000035RPA19591.960Cavia_porcellus
ENSODEG00000009038RPA19676.333ENSCCAG00000010981RPA19576.333Cebus_capucinus
ENSODEG00000009038RPA19694.295ENSCLAG00000005185-9594.295Chinchilla_lanigera
ENSODEG00000009038RPA19688.777ENSCLAG00000015045-9588.777Chinchilla_lanigera
ENSODEG00000009038RPA19675.500ENSCSAG00000013833RPA19575.874Chlorocebus_sabaeus
ENSODEG00000009038RPA17191.344ENSCHOG00000009454-10091.344Choloepus_hoffmanni
ENSODEG00000009038RPA19682.747ENSCHOG00000013540-10082.747Choloepus_hoffmanni
ENSODEG00000009038RPA19675.798ENSCPBG00000020377RPA19975.952Chrysemys_picta_bellii
ENSODEG00000009038RPA19442.470ENSCING00000023482-9342.470Ciona_intestinalis
ENSODEG00000009038RPA19683.920ENSCANG00000030911RPA19783.920Colobus_angolensis_palliatus
ENSODEG00000009038RPA19984.084ENSCGRG00001008197Rpa19984.244Cricetulus_griseus_chok1gshd
ENSODEG00000009038RPA18387.084ENSCGRG00000000582Rpa19987.280Cricetulus_griseus_crigri
ENSODEG00000009038RPA19759.365ENSCSEG00000013066rpa19659.365Cynoglossus_semilaevis
ENSODEG00000009038RPA19452.632ENSCSEG00000012726RPA19852.496Cynoglossus_semilaevis
ENSODEG00000009038RPA19662.857ENSCVAG00000019431rpa19962.392Cyprinodon_variegatus
ENSODEG00000009038RPA19355.056ENSCVAG00000013446-9355.056Cyprinodon_variegatus
ENSODEG00000009038RPA19663.317ENSDARG00000003938rpa19563.317Danio_rerio
ENSODEG00000009038RPA19685.378ENSDNOG00000017218RPA19585.378Dasypus_novemcinctus
ENSODEG00000009038RPA19986.016ENSDORG00000006199Rpa19986.016Dipodomys_ordii
ENSODEG00000009038RPA19639.735FBgn0010173RpA-709540.692Drosophila_melanogaster
ENSODEG00000009038RPA18385.567ENSETEG00000017608RPA18285.567Echinops_telfairi
ENSODEG00000009038RPA19686.387ENSEASG00005009372RPA19983.531Equus_asinus_asinus
ENSODEG00000009038RPA19686.600ENSECAG00000023886RPA19586.600Equus_caballus
ENSODEG00000009038RPA16889.762ENSEEUG00000002186-6889.762Erinaceus_europaeus
ENSODEG00000009038RPA19761.102ENSELUG00000021071rpa19561.371Esox_lucius
ENSODEG00000009038RPA18955.776ENSELUG00000006136RPA19955.776Esox_lucius
ENSODEG00000009038RPA110081.789ENSFCAG00000006306RPA19981.789Felis_catus
ENSODEG00000009038RPA19674.500ENSFALG00000006575RPA19574.500Ficedula_albicollis
ENSODEG00000009038RPA19691.765ENSFDAG00000007720RPA19591.765Fukomys_damarensis
ENSODEG00000009038RPA19661.745ENSFHEG00000003580rpa19561.745Fundulus_heteroclitus
ENSODEG00000009038RPA19658.459ENSGMOG00000010382rpa19658.626Gadus_morhua
ENSODEG00000009038RPA19673.746ENSGALG00000003072RPA19573.746Gallus_gallus
ENSODEG00000009038RPA19655.134ENSGAFG00000020953RPA19655.312Gambusia_affinis
ENSODEG00000009038RPA19661.279ENSGAFG00000012916rpa19660.304Gambusia_affinis
ENSODEG00000009038RPA19760.201ENSGACG00000010856rpa19660.201Gasterosteus_aculeatus
ENSODEG00000009038RPA19675.966ENSGAGG00000013611RPA19575.966Gopherus_agassizii
ENSODEG00000009038RPA19684.590ENSGGOG00000014186RPA19584.590Gorilla_gorilla
ENSODEG00000009038RPA19751.639ENSHBUG00000009348RPA19951.639Haplochromis_burtoni
ENSODEG00000009038RPA19763.043ENSHBUG00000017773rpa19663.043Haplochromis_burtoni
ENSODEG00000009038RPA19691.765ENSHGLG00000008846RPA19591.765Heterocephalus_glaber_female
ENSODEG00000009038RPA19691.765ENSHGLG00100017755-9591.765Heterocephalus_glaber_male
ENSODEG00000009038RPA19678.020ENSHGLG00100002005-9578.020Heterocephalus_glaber_male
ENSODEG00000009038RPA110082.880ENSHGLG00100000799-10082.880Heterocephalus_glaber_male
ENSODEG00000009038RPA19444.218ENSHCOG00000000351RPA19244.218Hippocampus_comes
ENSODEG00000009038RPA19661.307ENSHCOG00000001401rpa19562.312Hippocampus_comes
ENSODEG00000009038RPA19762.040ENSIPUG00000004400rpa19662.040Ictalurus_punctatus
ENSODEG00000009038RPA19383.592ENSSTOG00000022475RPA19583.592Ictidomys_tridecemlineatus
ENSODEG00000009038RPA19789.316ENSJJAG00000000876Rpa19889.316Jaculus_jaculus
ENSODEG00000009038RPA19654.983ENSKMAG00000000234RPA19654.983Kryptolebias_marmoratus
ENSODEG00000009038RPA19662.689ENSKMAG00000005605rpa19562.689Kryptolebias_marmoratus
ENSODEG00000009038RPA19764.465ENSLBEG00000002281RPA18664.465Labrus_bergylta
ENSODEG00000009038RPA19661.474ENSLBEG00000021604rpa19661.474Labrus_bergylta
ENSODEG00000009038RPA18066.533ENSLACG00000007210RPA19966.533Latimeria_chalumnae
ENSODEG00000009038RPA19667.395ENSLOCG00000006397rpa19567.395Lepisosteus_oculatus
ENSODEG00000009038RPA19685.378ENSLAFG00000015354RPA19585.378Loxodonta_africana
ENSODEG00000009038RPA18087.349ENSMFAG00000036138-9787.776Macaca_fascicularis
ENSODEG00000009038RPA19680.100ENSMMUG00000002442-9580.100Macaca_mulatta
ENSODEG00000009038RPA19687.270ENSMMUG00000011604-9787.625Macaca_mulatta
ENSODEG00000009038RPA18881.460ENSMNEG00000029837-9581.460Macaca_nemestrina
ENSODEG00000009038RPA19786.167ENSMNEG00000031632-9986.522Macaca_nemestrina
ENSODEG00000009038RPA19681.636ENSMLEG00000038768-9782.000Mandrillus_leucophaeus
ENSODEG00000009038RPA19653.241ENSMAMG00000020097RPA19653.467Mastacembelus_armatus
ENSODEG00000009038RPA19762.040ENSMAMG00000017993rpa19961.121Mastacembelus_armatus
ENSODEG00000009038RPA19657.468ENSMZEG00005024731RPA19657.468Maylandia_zebra
ENSODEG00000009038RPA19763.043ENSMZEG00005007551rpa19960.406Maylandia_zebra
ENSODEG00000009038RPA19673.746ENSMGAG00000005315RPA19573.746Meleagris_gallopavo
ENSODEG00000009038RPA19687.037ENSMAUG00000010474Rpa19787.037Mesocricetus_auratus
ENSODEG00000009038RPA19686.097ENSMICG00000012867RPA19586.097Microcebus_murinus
ENSODEG00000009038RPA19983.762ENSMOCG00000013019Rpa19983.762Microtus_ochrogaster
ENSODEG00000009038RPA19655.611ENSMMOG00000010868RPA19560.132Mola_mola
ENSODEG00000009038RPA19761.333ENSMMOG00000014292rpa19961.333Mola_mola
ENSODEG00000009038RPA19682.047ENSMODG00000010549RPA19582.047Monodelphis_domestica
ENSODEG00000009038RPA19061.959ENSMALG00000001208RPA17861.959Monopterus_albus
ENSODEG00000009038RPA19662.353ENSMALG00000011453rpa19562.521Monopterus_albus
ENSODEG00000009038RPA19983.601MGP_CAROLIEiJ_G0016734Rpa19983.762Mus_caroli
ENSODEG00000009038RPA19983.441ENSMUSG00000000751Rpa19983.441Mus_musculus
ENSODEG00000009038RPA19984.887MGP_PahariEiJ_G0017871Rpa19984.887Mus_pahari
ENSODEG00000009038RPA19983.467MGP_SPRETEiJ_G0017577Rpa19983.467Mus_spretus
ENSODEG00000009038RPA110080.640ENSMPUG00000013119RPA110080.640Mustela_putorius_furo
ENSODEG00000009038RPA19685.092ENSMLUG00000006113RPA19585.092Myotis_lucifugus
ENSODEG00000009038RPA19686.288ENSNGAG00000004522Rpa19486.288Nannospalax_galili
ENSODEG00000009038RPA19562.139ENSNBRG00000020595rpa19962.139Neolamprologus_brichardi
ENSODEG00000009038RPA19654.774ENSNBRG00000009672RPA19454.774Neolamprologus_brichardi
ENSODEG00000009038RPA19686.767ENSNLEG00000017149RPA19587.124Nomascus_leucogenys
ENSODEG00000009038RPA19671.189ENSMEUG00000006714RPA19771.189Notamacropus_eugenii
ENSODEG00000009038RPA19763.773ENSONIG00000013135rpa19663.773Oreochromis_niloticus
ENSODEG00000009038RPA19681.407ENSOANG00000010880RPA19781.575Ornithorhynchus_anatinus
ENSODEG00000009038RPA110081.579ENSOCUG00000001504RPA110081.579Oryctolagus_cuniculus
ENSODEG00000009038RPA19662.479ENSORLG00000004856rpa19662.479Oryzias_latipes
ENSODEG00000009038RPA19656.101ENSORLG00000003368RPA19656.101Oryzias_latipes
ENSODEG00000009038RPA19654.432ENSORLG00020015284RPA19654.432Oryzias_latipes_hni
ENSODEG00000009038RPA19662.647ENSORLG00020008980rpa19662.647Oryzias_latipes_hni
ENSODEG00000009038RPA17060.920ENSORLG00015005867-9860.920Oryzias_latipes_hsok
ENSODEG00000009038RPA19656.220ENSORLG00015020383RPA19656.220Oryzias_latipes_hsok
ENSODEG00000009038RPA19662.647ENSORLG00015013982rpa19662.647Oryzias_latipes_hsok
ENSODEG00000009038RPA19556.081ENSOMEG00000011040RPA19956.081Oryzias_melastigma
ENSODEG00000009038RPA19660.702ENSOMEG00000004704rpa19660.702Oryzias_melastigma
ENSODEG00000009038RPA19178.947ENSOGAG00000029379-9478.947Otolemur_garnettii
ENSODEG00000009038RPA19686.767ENSOGAG00000005581-9586.767Otolemur_garnettii
ENSODEG00000009038RPA110083.200ENSOARG00000014479RPA110083.200Ovis_aries
ENSODEG00000009038RPA19687.102ENSPPAG00000039680RPA19587.458Pan_paniscus
ENSODEG00000009038RPA110081.310ENSPPRG00000011807RPA19981.310Panthera_pardus
ENSODEG00000009038RPA110080.990ENSPTIG00000007898RPA19980.990Panthera_tigris_altaica
ENSODEG00000009038RPA19687.437ENSPTRG00000008539RPA19587.793Pan_troglodytes
ENSODEG00000009038RPA19687.102ENSPANG00000024592RPA19587.458Papio_anubis
ENSODEG00000009038RPA19160.638ENSPKIG00000008053rpa19061.170Paramormyrops_kingsleyae
ENSODEG00000009038RPA19674.958ENSPSIG00000015617RPA19774.958Pelodiscus_sinensis
ENSODEG00000009038RPA19654.515ENSPMGG00000000543RPA19956.522Periophthalmus_magnuspinnatus
ENSODEG00000009038RPA19760.935ENSPMGG00000011589rpa19861.102Periophthalmus_magnuspinnatus
ENSODEG00000009038RPA19983.923ENSPEMG00000021061Rpa19983.923Peromyscus_maniculatus_bairdii
ENSODEG00000009038RPA19681.072ENSPCIG00000019049RPA19581.240Phascolarctos_cinereus
ENSODEG00000009038RPA19661.953ENSPFOG00000003987rpa19561.953Poecilia_formosa
ENSODEG00000009038RPA19155.462ENSPLAG00000008844-9355.462Poecilia_latipinna
ENSODEG00000009038RPA19662.290ENSPLAG00000004984rpa19562.290Poecilia_latipinna
ENSODEG00000009038RPA19661.953ENSPMEG00000020602rpa19961.285Poecilia_mexicana
ENSODEG00000009038RPA19155.705ENSPMEG00000003627-9355.705Poecilia_mexicana
ENSODEG00000009038RPA19155.044ENSPREG00000010174rpa19255.044Poecilia_reticulata
ENSODEG00000009038RPA19653.917ENSPREG00000010119RPA19653.917Poecilia_reticulata
ENSODEG00000009038RPA19686.600ENSPCOG00000001799RPA19586.600Propithecus_coquereli
ENSODEG00000009038RPA19983.146ENSPVAG00000002149RPA19586.218Pteropus_vampyrus
ENSODEG00000009038RPA19657.143ENSPNYG00000024165RPA19657.143Pundamilia_nyererei
ENSODEG00000009038RPA19763.211ENSPNYG00000016316rpa19962.287Pundamilia_nyererei
ENSODEG00000009038RPA19754.424ENSPNAG00000008599rpa19655.838Pygocentrus_nattereri
ENSODEG00000009038RPA19688.406ENSRNOG00000003123Rpa19983.762Rattus_norvegicus
ENSODEG00000009038RPA19686.789ENSRBIG00000036587RPA19586.789Rhinopithecus_bieti
ENSODEG00000009038RPA19681.438ENSRROG00000043278RPA19581.438Rhinopithecus_roxellana
ENSODEG00000009038RPA19432.432YAR007CRFA19232.432Saccharomyces_cerevisiae
ENSODEG00000009038RPA19286.842ENSSBOG00000030233RPA19786.842Saimiri_boliviensis_boliviensis
ENSODEG00000009038RPA19681.711ENSSHAG00000007969RPA19581.940Sarcophilus_harrisii
ENSODEG00000009038RPA19663.912ENSSFOG00015005362rpa18863.912Scleropages_formosus
ENSODEG00000009038RPA19653.532ENSSMAG00000019746RPA19653.532Scophthalmus_maximus
ENSODEG00000009038RPA19653.201ENSSDUG00000016358RPA19653.354Seriola_dumerili
ENSODEG00000009038RPA19763.545ENSSDUG00000011949rpa19960.709Seriola_dumerili
ENSODEG00000009038RPA19763.880ENSSLDG00000011806rpa19961.031Seriola_lalandi_dorsalis
ENSODEG00000009038RPA19652.504ENSSLDG00000020784RPA19652.504Seriola_lalandi_dorsalis
ENSODEG00000009038RPA19667.337ENSSARG00000007506RPA19767.337Sorex_araneus
ENSODEG00000009038RPA19672.987ENSSPUG00000007223RPA19772.987Sphenodon_punctatus
ENSODEG00000009038RPA19762.375ENSSPAG00000009903rpa19662.375Stegastes_partitus
ENSODEG00000009038RPA19657.479ENSSPAG00000011165RPA19756.385Stegastes_partitus
ENSODEG00000009038RPA19685.427ENSSSCG00000017822RPA19885.427Sus_scrofa
ENSODEG00000009038RPA19674.247ENSTGUG00000005775RPA19574.247Taeniopygia_guttata
ENSODEG00000009038RPA19558.351ENSTRUG00000000405RPA18958.557Takifugu_rubripes
ENSODEG00000009038RPA19762.604ENSTRUG00000003616rpa19662.604Takifugu_rubripes
ENSODEG00000009038RPA19764.393ENSTNIG00000016199rpa19664.167Tetraodon_nigroviridis
ENSODEG00000009038RPA17596.154ENSTBEG00000002709RPA17896.154Tupaia_belangeri
ENSODEG00000009038RPA19685.403ENSTTRG00000001169RPA19585.403Tursiops_truncatus
ENSODEG00000009038RPA18693.617ENSUAMG00000015676RPA19492.308Ursus_americanus
ENSODEG00000009038RPA19684.925ENSUMAG00000009328RPA19584.925Ursus_maritimus
ENSODEG00000009038RPA19685.260ENSVPAG00000009443RPA19685.260Vicugna_pacos
ENSODEG00000009038RPA110082.560ENSVVUG00000021715RPA110082.560Vulpes_vulpes
ENSODEG00000009038RPA19671.477ENSXETG00000013538rpa19572.454Xenopus_tropicalis
ENSODEG00000009038RPA19655.892ENSXCOG00000009899-9955.892Xiphophorus_couchianus
ENSODEG00000009038RPA19159.823ENSXCOG00000010068rpa19459.364Xiphophorus_couchianus
ENSODEG00000009038RPA19660.943ENSXMAG00000004102rpa19961.285Xiphophorus_maculatus
ENSODEG00000009038RPA19664.612ENSXMAG00000010333RPA18664.612Xiphophorus_maculatus

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