EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000009099 (Gene tree)
Gene ID: 101565496
Gene Symbol: ZC3H6
Alias: -
Full Name: zinc finger CCCH-type containing 6
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 56955 bases
Position: chrJH651567.1:1672812-1729766
Accession: 101565496
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000012264	zf-CCCH	PF00642.24	7e-12	1	2
ENSODEP00000012264	zf-CCCH	PF00642.24	7e-12	2	2
ENSODEP00000012264	zf-CCCH_2	PF14608.6	1.4e-05	1	2
ENSODEP00000012264	zf-CCCH_2	PF14608.6	1.4e-05	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000012430	ZC3H6-201	3372	XM_004633229	ENSODEP00000012264	1123 (aa)	-	-
ENSODET00000012431	ZC3H6-202	327	-	ENSODEP00000012265	108 (aa)	-	-

Gene Model

Click here to download ENSODEG00000009099's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000009099's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000009099	ZC3H6	63	47.005	ENSODEG00000008320	ZC3H4	75	40.688

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000009099	ZC3H6	98	83.651	ENSG00000188177	ZC3H6	94	83.839	Homo_sapiens
ENSODEG00000009099	ZC3H6	66	63.850	ENSAPOG00000002681	zc3h6	81	45.111	Acanthochromis_polyacanthus
ENSODEG00000009099	ZC3H6	98	80.236	ENSAMEG00000016194	ZC3H6	94	80.392	Ailuropoda_melanoleuca
ENSODEG00000009099	ZC3H6	64	67.876	ENSACIG00000021843	zc3h6	71	61.538	Amphilophus_citrinellus
ENSODEG00000009099	ZC3H6	96	62.091	ENSAPLG00000014287	ZC3H6	94	62.664	Anas_platyrhynchos
ENSODEG00000009099	ZC3H6	98	83.514	ENSANAG00000024229	ZC3H6	94	83.704	Aotus_nancymaae
ENSODEG00000009099	ZC3H6	98	83.938	ENSCJAG00000016479	ZC3H6	94	84.121	Callithrix_jacchus
ENSODEG00000009099	ZC3H6	98	80.182	ENSCAFG00000007160	ZC3H6	93	79.568	Canis_familiaris
ENSODEG00000009099	ZC3H6	98	79.182	ENSCAFG00020017525	ZC3H6	92	78.578	Canis_lupus_dingo
ENSODEG00000009099	ZC3H6	83	77.471	ENSCHIG00000019719	-	95	76.408	Capra_hircus
ENSODEG00000009099	ZC3H6	98	83.394	ENSTSYG00000031857	ZC3H6	94	83.764	Carlito_syrichta
ENSODEG00000009099	ZC3H6	98	85.649	ENSCPOG00000003445	ZC3H6	95	85.714	Cavia_porcellus
ENSODEG00000009099	ZC3H6	98	84.015	ENSCATG00000036595	ZC3H6	100	83.910	Cercocebus_atys
ENSODEG00000009099	ZC3H6	95	91.394	ENSCLAG00000006605	ZC3H6	100	91.394	Chinchilla_lanigera
ENSODEG00000009099	ZC3H6	95	83.817	ENSCSAG00000016793	ZC3H6	100	83.817	Chlorocebus_sabaeus
ENSODEG00000009099	ZC3H6	98	83.833	ENSCANG00000041036	ZC3H6	95	84.018	Colobus_angolensis_palliatus
ENSODEG00000009099	ZC3H6	98	75.318	ENSCGRG00001022022	Zc3h6	94	75.227	Cricetulus_griseus_chok1gshd
ENSODEG00000009099	ZC3H6	99	76.250	ENSCGRG00000016162	Zc3h6	95	75.979	Cricetulus_griseus_crigri
ENSODEG00000009099	ZC3H6	71	56.890	ENSCSEG00000012267	zc3h6	88	51.840	Cynoglossus_semilaevis
ENSODEG00000009099	ZC3H6	99	72.232	ENSDNOG00000044811	ZC3H6	95	71.886	Dasypus_novemcinctus
ENSODEG00000009099	ZC3H6	98	79.727	ENSDORG00000013967	Zc3h6	94	79.746	Dipodomys_ordii
ENSODEG00000009099	ZC3H6	88	82.323	ENSEASG00005006493	ZC3H6	100	82.323	Equus_asinus_asinus
ENSODEG00000009099	ZC3H6	98	82.909	ENSECAG00000023620	ZC3H6	94	83.110	Equus_caballus
ENSODEG00000009099	ZC3H6	77	70.841	ENSEEUG00000013883	-	75	71.053	Erinaceus_europaeus
ENSODEG00000009099	ZC3H6	98	81.381	ENSFCAG00000008089	ZC3H6	94	80.177	Felis_catus
ENSODEG00000009099	ZC3H6	98	61.394	ENSFALG00000011589	ZC3H6	94	62.127	Ficedula_albicollis
ENSODEG00000009099	ZC3H6	98	89.617	ENSFDAG00000002521	ZC3H6	95	89.705	Fukomys_damarensis
ENSODEG00000009099	ZC3H6	96	61.384	ENSGALG00000008269	ZC3H6	93	61.633	Gallus_gallus
ENSODEG00000009099	ZC3H6	64	62.694	ENSGAFG00000006771	zc3h6	72	62.694	Gambusia_affinis
ENSODEG00000009099	ZC3H6	53	37.115	ENSGACG00000005343	zc3h6	52	36.164	Gasterosteus_aculeatus
ENSODEG00000009099	ZC3H6	98	63.864	ENSGAGG00000010857	ZC3H6	95	64.556	Gopherus_agassizii
ENSODEG00000009099	ZC3H6	98	84.015	ENSGGOG00000001665	ZC3H6	95	83.482	Gorilla_gorilla
ENSODEG00000009099	ZC3H6	98	90.545	ENSHGLG00000011882	ZC3H6	92	90.706	Heterocephalus_glaber_female
ENSODEG00000009099	ZC3H6	98	87.455	ENSHGLG00100002559	ZC3H6	95	87.221	Heterocephalus_glaber_male
ENSODEG00000009099	ZC3H6	96	37.633	ENSHCOG00000012519	zc3h6	81	49.322	Hippocampus_comes
ENSODEG00000009099	ZC3H6	95	80.827	ENSSTOG00000008120	-	100	80.827	Ictidomys_tridecemlineatus
ENSODEG00000009099	ZC3H6	99	79.695	ENSJJAG00000013206	Zc3h6	94	79.659	Jaculus_jaculus
ENSODEG00000009099	ZC3H6	65	65.803	ENSLBEG00000003054	zc3h6	76	56.809	Labrus_bergylta
ENSODEG00000009099	ZC3H6	99	49.702	ENSLACG00000012014	ZC3H6	95	50.000	Latimeria_chalumnae
ENSODEG00000009099	ZC3H6	99	45.699	ENSLOCG00000016548	zc3h6	91	45.752	Lepisosteus_oculatus
ENSODEG00000009099	ZC3H6	98	76.156	ENSLAFG00000001151	ZC3H6	100	75.714	Loxodonta_africana
ENSODEG00000009099	ZC3H6	98	84.015	ENSMFAG00000036963	ZC3H6	94	84.196	Macaca_fascicularis
ENSODEG00000009099	ZC3H6	98	83.924	ENSMMUG00000016430	ZC3H6	94	84.107	Macaca_mulatta
ENSODEG00000009099	ZC3H6	97	83.712	ENSMNEG00000031225	ZC3H6	100	83.630	Macaca_nemestrina
ENSODEG00000009099	ZC3H6	98	84.105	ENSMLEG00000038821	ZC3H6	94	84.286	Mandrillus_leucophaeus
ENSODEG00000009099	ZC3H6	96	61.588	ENSMGAG00000003025	ZC3H6	94	61.741	Meleagris_gallopavo
ENSODEG00000009099	ZC3H6	99	75.760	ENSMAUG00000017009	Zc3h6	95	75.067	Mesocricetus_auratus
ENSODEG00000009099	ZC3H6	99	83.527	ENSMICG00000036353	ZC3H6	94	83.482	Microcebus_murinus
ENSODEG00000009099	ZC3H6	99	74.619	ENSMOCG00000002054	Zc3h6	94	74.332	Microtus_ochrogaster
ENSODEG00000009099	ZC3H6	100	66.783	ENSMODG00000006612	ZC3H6	96	66.783	Monodelphis_domestica
ENSODEG00000009099	ZC3H6	70	57.621	ENSMALG00000002048	zc3h6	73	59.677	Monopterus_albus
ENSODEG00000009099	ZC3H6	99	72.824	MGP_CAROLIEiJ_G0024278	Zc3h6	94	72.566	Mus_caroli
ENSODEG00000009099	ZC3H6	99	73.101	ENSMUSG00000042851	Zc3h6	94	72.841	Mus_musculus
ENSODEG00000009099	ZC3H6	99	73.190	MGP_PahariEiJ_G0025723	Zc3h6	94	72.752	Mus_pahari
ENSODEG00000009099	ZC3H6	99	73.393	MGP_SPRETEiJ_G0025198	Zc3h6	94	73.132	Mus_spretus
ENSODEG00000009099	ZC3H6	95	80.449	ENSMPUG00000009624	ZC3H6	100	79.333	Mustela_putorius_furo
ENSODEG00000009099	ZC3H6	98	76.022	ENSMLUG00000004896	ZC3H6	94	76.875	Myotis_lucifugus
ENSODEG00000009099	ZC3H6	100	77.709	ENSNGAG00000013596	Zc3h6	100	77.442	Nannospalax_galili
ENSODEG00000009099	ZC3H6	61	68.229	ENSNBRG00000015382	zc3h6	70	62.393	Neolamprologus_brichardi
ENSODEG00000009099	ZC3H6	98	83.015	ENSNLEG00000033657	ZC3H6	95	83.214	Nomascus_leucogenys
ENSODEG00000009099	ZC3H6	98	75.568	ENSOPRG00000012717	ZC3H6	100	75.357	Ochotona_princeps
ENSODEG00000009099	ZC3H6	64	68.205	ENSONIG00000009880	zc3h6	83	44.444	Oreochromis_niloticus
ENSODEG00000009099	ZC3H6	99	65.813	ENSOANG00000012054	-	96	66.402	Ornithorhynchus_anatinus
ENSODEG00000009099	ZC3H6	99	81.528	ENSOCUG00000011125	ZC3H6	100	81.419	Oryctolagus_cuniculus
ENSODEG00000009099	ZC3H6	83	41.471	ENSORLG00000011179	zc3h6	50	39.478	Oryzias_latipes
ENSODEG00000009099	ZC3H6	83	41.939	ENSORLG00020017202	zc3h6	50	40.228	Oryzias_latipes_hni
ENSODEG00000009099	ZC3H6	83	40.862	ENSORLG00015001664	zc3h6	50	38.017	Oryzias_latipes_hsok
ENSODEG00000009099	ZC3H6	83	39.594	ENSOMEG00000001296	zc3h6	77	50.685	Oryzias_melastigma
ENSODEG00000009099	ZC3H6	98	82.198	ENSOGAG00000002556	ZC3H6	95	82.411	Otolemur_garnettii
ENSODEG00000009099	ZC3H6	98	78.694	ENSOARG00000014503	ZC3H6	94	78.055	Ovis_aries
ENSODEG00000009099	ZC3H6	98	83.924	ENSPPAG00000030495	ZC3H6	95	84.107	Pan_paniscus
ENSODEG00000009099	ZC3H6	98	81.562	ENSPPRG00000005673	ZC3H6	94	80.265	Panthera_pardus
ENSODEG00000009099	ZC3H6	98	80.472	ENSPTIG00000015800	ZC3H6	94	79.204	Panthera_tigris_altaica
ENSODEG00000009099	ZC3H6	98	84.015	ENSPTRG00000012363	ZC3H6	94	84.196	Pan_troglodytes
ENSODEG00000009099	ZC3H6	98	83.924	ENSPANG00000025224	ZC3H6	94	84.107	Papio_anubis
ENSODEG00000009099	ZC3H6	65	68.229	ENSPKIG00000007353	zc3h6	82	62.128	Paramormyrops_kingsleyae
ENSODEG00000009099	ZC3H6	98	63.921	ENSPSIG00000002520	ZC3H6	96	64.613	Pelodiscus_sinensis
ENSODEG00000009099	ZC3H6	99	74.934	ENSPEMG00000000918	Zc3h6	95	74.757	Peromyscus_maniculatus_bairdii
ENSODEG00000009099	ZC3H6	95	68.854	ENSPCIG00000029741	ZC3H6	100	68.854	Phascolarctos_cinereus
ENSODEG00000009099	ZC3H6	83	39.095	ENSPFOG00000015748	zc3h6	77	50.696	Poecilia_formosa
ENSODEG00000009099	ZC3H6	83	38.353	ENSPLAG00000002469	zc3h6	77	50.696	Poecilia_latipinna
ENSODEG00000009099	ZC3H6	64	67.380	ENSPMEG00000020802	zc3h6	83	67.380	Poecilia_mexicana
ENSODEG00000009099	ZC3H6	70	63.592	ENSPREG00000023126	zc3h6	77	58.333	Poecilia_reticulata
ENSODEG00000009099	ZC3H6	82	73.355	ENSPCAG00000015468	ZC3H6	78	72.600	Procavia_capensis
ENSODEG00000009099	ZC3H6	98	83.379	ENSPCOG00000016627	ZC3H6	93	83.379	Propithecus_coquereli
ENSODEG00000009099	ZC3H6	66	91.667	ENSPVAG00000013728	ZC3H6	65	93.023	Pteropus_vampyrus
ENSODEG00000009099	ZC3H6	64	68.229	ENSPNYG00000018130	zc3h6	72	61.966	Pundamilia_nyererei
ENSODEG00000009099	ZC3H6	83	42.132	ENSPNAG00000009331	zc3h6	89	38.846	Pygocentrus_nattereri
ENSODEG00000009099	ZC3H6	99	73.637	ENSRNOG00000026277	Zc3h6	93	73.636	Rattus_norvegicus
ENSODEG00000009099	ZC3H6	98	83.575	ENSSBOG00000033489	ZC3H6	100	83.645	Saimiri_boliviensis_boliviensis
ENSODEG00000009099	ZC3H6	87	67.803	ENSSHAG00000016634	ZC3H6	100	67.803	Sarcophilus_harrisii
ENSODEG00000009099	ZC3H6	98	39.316	ENSSFOG00015004488	zc3h6	90	39.603	Scleropages_formosus
ENSODEG00000009099	ZC3H6	64	67.016	ENSSMAG00000008411	zc3h6	76	46.173	Scophthalmus_maximus
ENSODEG00000009099	ZC3H6	66	64.319	ENSSDUG00000006105	zc3h6	79	48.804	Seriola_dumerili
ENSODEG00000009099	ZC3H6	66	64.319	ENSSLDG00000021813	zc3h6	79	48.804	Seriola_lalandi_dorsalis
ENSODEG00000009099	ZC3H6	95	76.279	ENSSARG00000001035	ZC3H6	91	75.442	Sorex_araneus
ENSODEG00000009099	ZC3H6	64	58.268	ENSSPUG00000013031	-	73	35.122	Sphenodon_punctatus
ENSODEG00000009099	ZC3H6	98	81.670	ENSSSCG00000008096	ZC3H6	94	81.696	Sus_scrofa
ENSODEG00000009099	ZC3H6	98	60.877	ENSTGUG00000007468	ZC3H6	94	62.060	Taeniopygia_guttata
ENSODEG00000009099	ZC3H6	80	46.475	ENSTRUG00000012901	zc3h6	77	49.081	Takifugu_rubripes
ENSODEG00000009099	ZC3H6	95	39.308	ENSTNIG00000016608	zc3h6	82	55.036	Tetraodon_nigroviridis
ENSODEG00000009099	ZC3H6	90	85.766	ENSTBEG00000016232	ZC3H6	91	85.766	Tupaia_belangeri
ENSODEG00000009099	ZC3H6	79	76.645	ENSTTRG00000013154	ZC3H6	71	86.047	Tursiops_truncatus
ENSODEG00000009099	ZC3H6	95	80.056	ENSUAMG00000002401	ZC3H6	100	78.664	Ursus_americanus
ENSODEG00000009099	ZC3H6	95	80.150	ENSUMAG00000008663	ZC3H6	100	78.757	Ursus_maritimus
ENSODEG00000009099	ZC3H6	98	79.038	ENSVPAG00000005912	ZC3H6	95	78.584	Vicugna_pacos
ENSODEG00000009099	ZC3H6	95	80.543	ENSVVUG00000028662	ZC3H6	100	79.147	Vulpes_vulpes
ENSODEG00000009099	ZC3H6	85	58.934	ENSXETG00000013762	zc3h6	88	60.197	Xenopus_tropicalis
ENSODEG00000009099	ZC3H6	58	63.592	ENSXCOG00000011662	zc3h6	72	56.015	Xiphophorus_couchianus
ENSODEG00000009099	ZC3H6	64	66.667	ENSXMAG00000020822	zc3h6	76	49.584	Xiphophorus_maculatus