EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000009131 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 1693 bases
Position: chrJH651531.1:12053686-12055378
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000012308	tRNA_anti-codon	PF01336.25	6.6e-10	1	1
ENSODEP00000012309	tRNA_anti-codon	PF01336.25	6.9e-10	1	1
ENSODEP00000012309	tRNA-synt_2	PF00152.20	5.6e-69	1	1
ENSODEP00000012308	tRNA-synt_2	PF00152.20	1.3e-68	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000012476	-	1494	-	ENSODEP00000012309	497 (aa)	-	-
ENSODET00000012475	-	1455	-	ENSODEP00000012308	484 (aa)	-	-

Gene Model

Click here to download ENSODEG00000009131's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000009131's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000009131	-	100	79.336	ENSODEG00000006037	-	100	79.336
ENSODEG00000009131	-	94	86.335	ENSODEG00000018440	-	100	84.109

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000009131	-	99	79.468	ENSG00000134440	NARS	100	85.890	Homo_sapiens
ENSODEG00000009131	-	96	67.961	ENSAPOG00000019748	nars	95	67.961	Acanthochromis_polyacanthus
ENSODEG00000009131	-	99	80.038	ENSAMEG00000014819	NARS	100	77.996	Ailuropoda_melanoleuca
ENSODEG00000009131	-	96	69.261	ENSACIG00000015208	nars	96	69.261	Amphilophus_citrinellus
ENSODEG00000009131	-	99	69.392	ENSAOCG00000007242	nars	94	69.392	Amphiprion_ocellaris
ENSODEG00000009131	-	99	69.392	ENSAPEG00000021050	nars	94	69.392	Amphiprion_percula
ENSODEG00000009131	-	96	69.396	ENSATEG00000006160	NARS	90	69.396	Anabas_testudineus
ENSODEG00000009131	-	99	71.103	ENSATEG00000006362	nars	91	71.103	Anabas_testudineus
ENSODEG00000009131	-	99	73.764	ENSAPLG00000015701	NARS	94	73.764	Anas_platyrhynchos
ENSODEG00000009131	-	99	72.814	ENSACAG00000009539	NARS	94	72.814	Anolis_carolinensis
ENSODEG00000009131	-	99	78.897	ENSANAG00000030611	-	96	78.897	Aotus_nancymaae
ENSODEG00000009131	-	99	73.694	ENSANAG00000030491	-	100	71.818	Aotus_nancymaae
ENSODEG00000009131	-	99	70.532	ENSACLG00000002165	nars	94	70.532	Astatotilapia_calliptera
ENSODEG00000009131	-	99	70.554	ENSAMXG00000009766	nars	94	70.554	Astyanax_mexicanus
ENSODEG00000009131	-	99	79.658	ENSBTAG00000019271	NARS	100	77.460	Bos_taurus
ENSODEG00000009131	-	92	51.646	WBGene00003815	nars-1	95	50.581	Caenorhabditis_elegans
ENSODEG00000009131	-	99	79.087	ENSCJAG00000003837	NARS	96	79.087	Callithrix_jacchus
ENSODEG00000009131	-	99	80.228	ENSCAFG00000000125	NARS	100	77.996	Canis_familiaris
ENSODEG00000009131	-	99	80.418	ENSCAFG00020021055	NARS	100	78.175	Canis_lupus_dingo
ENSODEG00000009131	-	99	80.038	ENSCHIG00000019297	NARS	100	77.818	Capra_hircus
ENSODEG00000009131	-	99	79.848	ENSTSYG00000011864	NARS	100	77.996	Carlito_syrichta
ENSODEG00000009131	-	99	70.727	ENSCAPG00000013547	-	100	69.004	Cavia_aperea
ENSODEG00000009131	-	99	81.559	ENSCAPG00000016124	-	97	81.559	Cavia_aperea
ENSODEG00000009131	-	99	80.418	ENSCAPG00000011159	-	100	77.996	Cavia_aperea
ENSODEG00000009131	-	97	79.116	ENSCPOG00000030002	-	97	76.938	Cavia_porcellus
ENSODEG00000009131	-	75	79.208	ENSCPOG00000040580	-	100	79.208	Cavia_porcellus
ENSODEG00000009131	-	99	81.559	ENSCPOG00000013227	-	100	79.428	Cavia_porcellus
ENSODEG00000009131	-	99	68.485	ENSCPOG00000012523	-	93	68.031	Cavia_porcellus
ENSODEG00000009131	-	99	72.925	ENSCPOG00000038524	-	100	70.872	Cavia_porcellus
ENSODEG00000009131	-	99	75.856	ENSCCAG00000035268	NARS	96	75.856	Cebus_capucinus
ENSODEG00000009131	-	98	67.949	ENSCATG00000032557	NARS	100	67.949	Cercocebus_atys
ENSODEG00000009131	-	99	83.270	ENSCLAG00000009270	NARS	100	81.004	Chinchilla_lanigera
ENSODEG00000009131	-	99	78.517	ENSCSAG00000018152	NARS	100	76.882	Chlorocebus_sabaeus
ENSODEG00000009131	-	75	70.025	ENSCHOG00000006843	NARS	75	70.025	Choloepus_hoffmanni
ENSODEG00000009131	-	99	74.335	ENSCPBG00000025555	NARS	97	74.335	Chrysemys_picta_bellii
ENSODEG00000009131	-	99	58.095	ENSCING00000008172	-	94	58.095	Ciona_intestinalis
ENSODEG00000009131	-	99	56.952	ENSCSAVG00000010410	-	100	57.419	Ciona_savignyi
ENSODEG00000009131	-	99	77.629	ENSCANG00000032141	-	99	77.629	Colobus_angolensis_palliatus
ENSODEG00000009131	-	100	72.797	ENSCANG00000017946	-	100	72.797	Colobus_angolensis_palliatus
ENSODEG00000009131	-	99	78.897	ENSCGRG00001024444	-	100	76.744	Cricetulus_griseus_chok1gshd
ENSODEG00000009131	-	99	73.805	ENSCGRG00001017012	-	99	73.805	Cricetulus_griseus_chok1gshd
ENSODEG00000009131	-	99	73.805	ENSCGRG00000002317	-	99	73.805	Cricetulus_griseus_crigri
ENSODEG00000009131	-	99	78.517	ENSCGRG00000012095	-	100	76.386	Cricetulus_griseus_crigri
ENSODEG00000009131	-	99	69.962	ENSCSEG00000016023	nars	96	69.962	Cynoglossus_semilaevis
ENSODEG00000009131	-	99	70.342	ENSCVAG00000007819	nars	94	70.342	Cyprinodon_variegatus
ENSODEG00000009131	-	99	71.293	ENSDARG00000061100	nars	95	71.293	Danio_rerio
ENSODEG00000009131	-	99	78.517	ENSDNOG00000039971	NARS	100	76.565	Dasypus_novemcinctus
ENSODEG00000009131	-	99	79.278	ENSDORG00000011542	Nars	100	77.460	Dipodomys_ordii
ENSODEG00000009131	-	99	62.619	FBgn0086443	AsnRS	94	62.619	Drosophila_melanogaster
ENSODEG00000009131	-	81	75.806	ENSETEG00000017135	NARS	79	75.806	Echinops_telfairi
ENSODEG00000009131	-	96	58.416	ENSEBUG00000012384	nars	100	58.416	Eptatretus_burgeri
ENSODEG00000009131	-	99	79.087	ENSEASG00005003393	NARS	100	77.281	Equus_asinus_asinus
ENSODEG00000009131	-	99	79.087	ENSECAG00000017066	NARS	100	77.281	Equus_caballus
ENSODEG00000009131	-	99	80.228	ENSEEUG00000012239	NARS	96	80.228	Erinaceus_europaeus
ENSODEG00000009131	-	99	69.011	ENSELUG00000015334	nars	94	69.011	Esox_lucius
ENSODEG00000009131	-	99	79.848	ENSFCAG00000010822	NARS	95	77.957	Felis_catus
ENSODEG00000009131	-	97	74.175	ENSFALG00000011698	NARS	100	74.175	Ficedula_albicollis
ENSODEG00000009131	-	99	80.608	ENSFDAG00000010814	NARS	100	78.354	Fukomys_damarensis
ENSODEG00000009131	-	99	65.414	ENSFHEG00000015083	nars	95	65.414	Fundulus_heteroclitus
ENSODEG00000009131	-	99	65.970	ENSGMOG00000012599	nars	97	65.970	Gadus_morhua
ENSODEG00000009131	-	99	73.764	ENSGALG00000040506	NARS	100	73.786	Gallus_gallus
ENSODEG00000009131	-	99	69.962	ENSGAFG00000006981	nars	94	69.962	Gambusia_affinis
ENSODEG00000009131	-	99	69.392	ENSGACG00000000648	nars	100	66.905	Gasterosteus_aculeatus
ENSODEG00000009131	-	81	73.272	ENSGAGG00000016957	NARS	97	73.272	Gopherus_agassizii
ENSODEG00000009131	-	99	79.087	ENSGGOG00000009419	NARS	96	79.087	Gorilla_gorilla
ENSODEG00000009131	-	99	70.532	ENSHBUG00000008458	nars	94	70.532	Haplochromis_burtoni
ENSODEG00000009131	-	99	60.765	ENSHGLG00000000814	-	100	59.245	Heterocephalus_glaber_female
ENSODEG00000009131	-	99	66.730	ENSHGLG00000010764	-	100	65.116	Heterocephalus_glaber_female
ENSODEG00000009131	-	99	80.228	ENSHGLG00000003044	NARS	100	77.818	Heterocephalus_glaber_female
ENSODEG00000009131	-	99	60.765	ENSHGLG00100002873	-	100	59.245	Heterocephalus_glaber_male
ENSODEG00000009131	-	99	79.962	ENSHGLG00100007823	-	100	77.558	Heterocephalus_glaber_male
ENSODEG00000009131	-	99	72.865	ENSHGLG00100018319	-	100	70.893	Heterocephalus_glaber_male
ENSODEG00000009131	-	99	69.772	ENSHCOG00000002552	nars	94	69.772	Hippocampus_comes
ENSODEG00000009131	-	99	70.152	ENSIPUG00000007374	nars	91	70.152	Ictalurus_punctatus
ENSODEG00000009131	-	99	79.848	ENSSTOG00000002118	-	100	77.996	Ictidomys_tridecemlineatus
ENSODEG00000009131	-	99	65.399	ENSSTOG00000029091	-	100	64.222	Ictidomys_tridecemlineatus
ENSODEG00000009131	-	99	78.897	ENSJJAG00000017350	Nars	100	76.923	Jaculus_jaculus
ENSODEG00000009131	-	99	70.342	ENSKMAG00000007257	nars	94	70.342	Kryptolebias_marmoratus
ENSODEG00000009131	-	99	71.863	ENSLBEG00000020470	nars	94	71.863	Labrus_bergylta
ENSODEG00000009131	-	99	73.574	ENSLACG00000017015	NARS	94	73.574	Latimeria_chalumnae
ENSODEG00000009131	-	99	70.152	ENSLOCG00000003598	nars	94	70.152	Lepisosteus_oculatus
ENSODEG00000009131	-	99	77.567	ENSLAFG00000000559	NARS	100	75.492	Loxodonta_africana
ENSODEG00000009131	-	99	77.947	ENSMFAG00000032255	NARS	100	76.344	Macaca_fascicularis
ENSODEG00000009131	-	99	77.757	ENSMMUG00000019974	NARS	100	76.165	Macaca_mulatta
ENSODEG00000009131	-	99	77.947	ENSMNEG00000043822	NARS	100	76.344	Macaca_nemestrina
ENSODEG00000009131	-	99	75.947	ENSMLEG00000015588	NARS	98	92.105	Mandrillus_leucophaeus
ENSODEG00000009131	-	99	70.342	ENSMAMG00000022834	nars	94	70.342	Mastacembelus_armatus
ENSODEG00000009131	-	99	70.532	ENSMZEG00005023600	nars	94	70.532	Maylandia_zebra
ENSODEG00000009131	-	71	70.745	ENSMGAG00000010041	-	100	70.745	Meleagris_gallopavo
ENSODEG00000009131	-	85	83.333	ENSMAUG00000016087	Nars	100	77.637	Mesocricetus_auratus
ENSODEG00000009131	-	99	79.848	ENSMICG00000003077	NARS	100	77.879	Microcebus_murinus
ENSODEG00000009131	-	99	78.897	ENSMOCG00000000974	Nars	100	76.744	Microtus_ochrogaster
ENSODEG00000009131	-	96	65.422	ENSMMOG00000012206	nars	100	65.422	Mola_mola
ENSODEG00000009131	-	99	69.202	ENSMODG00000020445	NARS	100	67.263	Monodelphis_domestica
ENSODEG00000009131	-	99	68.482	ENSMALG00000000606	nars	99	68.482	Monopterus_albus
ENSODEG00000009131	-	99	78.707	MGP_CAROLIEiJ_G0022348	Nars	100	76.208	Mus_caroli
ENSODEG00000009131	-	99	78.707	ENSMUSG00000024587	Nars	100	76.208	Mus_musculus
ENSODEG00000009131	-	99	78.707	MGP_PahariEiJ_G0019077	Nars	100	76.208	Mus_pahari
ENSODEG00000009131	-	99	78.517	MGP_SPRETEiJ_G0023259	Nars	100	76.029	Mus_spretus
ENSODEG00000009131	-	99	79.658	ENSMPUG00000016470	NARS	100	77.639	Mustela_putorius_furo
ENSODEG00000009131	-	99	79.848	ENSMLUG00000004325	NARS	100	77.996	Myotis_lucifugus
ENSODEG00000009131	-	99	80.418	ENSNGAG00000010955	Nars	96	80.418	Nannospalax_galili
ENSODEG00000009131	-	99	70.532	ENSNBRG00000002982	nars	94	70.532	Neolamprologus_brichardi
ENSODEG00000009131	-	99	78.707	ENSNLEG00000008082	NARS	96	78.707	Nomascus_leucogenys
ENSODEG00000009131	-	99	70.286	ENSMEUG00000016169	-	97	70.286	Notamacropus_eugenii
ENSODEG00000009131	-	57	76.632	ENSMEUG00000000774	-	100	76.632	Notamacropus_eugenii
ENSODEG00000009131	-	99	78.137	ENSOPRG00000007419	NARS	96	78.707	Ochotona_princeps
ENSODEG00000009131	-	99	70.913	ENSONIG00000012699	nars	94	70.913	Oreochromis_niloticus
ENSODEG00000009131	-	99	69.157	ENSOANG00000001717	-	96	69.157	Ornithorhynchus_anatinus
ENSODEG00000009131	-	99	75.332	ENSOCUG00000003025	NARS	96	75.332	Oryctolagus_cuniculus
ENSODEG00000009131	-	99	70.913	ENSORLG00000015078	nars	94	70.913	Oryzias_latipes
ENSODEG00000009131	-	99	70.913	ENSORLG00020002549	nars	94	70.913	Oryzias_latipes_hni
ENSODEG00000009131	-	99	70.722	ENSORLG00015015442	nars	94	70.722	Oryzias_latipes_hsok
ENSODEG00000009131	-	99	70.532	ENSOMEG00000003858	nars	94	70.532	Oryzias_melastigma
ENSODEG00000009131	-	99	78.558	ENSOGAG00000016302	NARS	100	76.786	Otolemur_garnettii
ENSODEG00000009131	-	99	80.038	ENSOARG00000005239	NARS	100	77.957	Ovis_aries
ENSODEG00000009131	-	99	79.468	ENSPPAG00000038949	NARS	96	79.468	Pan_paniscus
ENSODEG00000009131	-	99	79.848	ENSPPRG00000015312	NARS	100	77.879	Panthera_pardus
ENSODEG00000009131	-	99	80.038	ENSPTIG00000006800	NARS	100	78.062	Panthera_tigris_altaica
ENSODEG00000009131	-	99	79.468	ENSPTRG00000010047	NARS	100	77.599	Pan_troglodytes
ENSODEG00000009131	-	99	78.137	ENSPANG00000019006	NARS	100	76.523	Papio_anubis
ENSODEG00000009131	-	99	71.483	ENSPKIG00000024492	nars	94	71.483	Paramormyrops_kingsleyae
ENSODEG00000009131	-	99	74.905	ENSPSIG00000012221	NARS	95	74.905	Pelodiscus_sinensis
ENSODEG00000009131	-	72	58.854	ENSPMGG00000022730	nars	100	58.854	Periophthalmus_magnuspinnatus
ENSODEG00000009131	-	99	78.707	ENSPEMG00000014431	Nars	100	76.565	Peromyscus_maniculatus_bairdii
ENSODEG00000009131	-	99	75.856	ENSPCIG00000020193	NARS	100	73.524	Phascolarctos_cinereus
ENSODEG00000009131	-	99	69.582	ENSPFOG00000010386	nars	94	69.582	Poecilia_formosa
ENSODEG00000009131	-	99	69.392	ENSPLAG00000005926	nars	94	69.392	Poecilia_latipinna
ENSODEG00000009131	-	99	69.582	ENSPMEG00000009045	nars	94	69.582	Poecilia_mexicana
ENSODEG00000009131	-	99	69.962	ENSPREG00000020098	nars	97	69.962	Poecilia_reticulata
ENSODEG00000009131	-	99	78.897	ENSPPYG00000029482	-	93	76.923	Pongo_abelii
ENSODEG00000009131	-	86	80.426	ENSPCAG00000004772	NARS	82	80.426	Procavia_capensis
ENSODEG00000009131	-	99	75.475	ENSPCOG00000020832	NARS	96	75.475	Propithecus_coquereli
ENSODEG00000009131	-	99	75.856	ENSPVAG00000015743	NARS	96	75.856	Pteropus_vampyrus
ENSODEG00000009131	-	94	71.636	ENSPNYG00000015321	nars	84	71.636	Pundamilia_nyererei
ENSODEG00000009131	-	99	70.363	ENSPNAG00000018432	nars	94	70.363	Pygocentrus_nattereri
ENSODEG00000009131	-	99	78.137	ENSRNOG00000017852	Nars	100	75.806	Rattus_norvegicus
ENSODEG00000009131	-	99	78.137	ENSRBIG00000028813	NARS	100	76.386	Rhinopithecus_bieti
ENSODEG00000009131	-	99	74.525	ENSRROG00000042302	NARS	96	74.525	Rhinopithecus_roxellana
ENSODEG00000009131	-	99	46.529	YHR019C	DED81	96	46.529	Saccharomyces_cerevisiae
ENSODEG00000009131	-	99	79.468	ENSSBOG00000020784	NARS	96	79.468	Saimiri_boliviensis_boliviensis
ENSODEG00000009131	-	99	77.757	ENSSHAG00000017850	NARS	100	75.313	Sarcophilus_harrisii
ENSODEG00000009131	-	93	66.049	ENSSFOG00015001094	-	91	66.049	Scleropages_formosus
ENSODEG00000009131	-	99	69.582	ENSSFOG00015021120	nars	94	69.582	Scleropages_formosus
ENSODEG00000009131	-	99	69.772	ENSSMAG00000012447	nars	94	69.772	Scophthalmus_maximus
ENSODEG00000009131	-	99	69.962	ENSSDUG00000001252	nars	94	69.962	Seriola_dumerili
ENSODEG00000009131	-	99	70.152	ENSSLDG00000022141	nars	94	70.152	Seriola_lalandi_dorsalis
ENSODEG00000009131	-	97	67.251	ENSSARG00000011905	-	99	67.251	Sorex_araneus
ENSODEG00000009131	-	82	83.696	ENSSARG00000014016	-	79	83.696	Sorex_araneus
ENSODEG00000009131	-	99	69.392	ENSSPUG00000015915	NARS	94	69.392	Sphenodon_punctatus
ENSODEG00000009131	-	99	69.962	ENSSPAG00000014810	nars	94	69.962	Stegastes_partitus
ENSODEG00000009131	-	99	79.278	ENSSSCG00000004542	NARS	100	77.281	Sus_scrofa
ENSODEG00000009131	-	99	73.384	ENSTGUG00000017495	NARS	100	70.483	Taeniopygia_guttata
ENSODEG00000009131	-	91	68.994	ENSTNIG00000002274	nars	100	68.994	Tetraodon_nigroviridis
ENSODEG00000009131	-	87	63.617	ENSTNIG00000002275	-	100	63.617	Tetraodon_nigroviridis
ENSODEG00000009131	-	99	63.308	ENSTBEG00000015069	NARS	96	63.308	Tupaia_belangeri
ENSODEG00000009131	-	97	78.530	ENSTTRG00000012961	NARS	94	78.530	Tursiops_truncatus
ENSODEG00000009131	-	99	80.038	ENSUAMG00000000736	NARS	100	77.996	Ursus_americanus
ENSODEG00000009131	-	99	80.038	ENSUMAG00000005704	NARS	100	77.996	Ursus_maritimus
ENSODEG00000009131	-	99	64.381	ENSVPAG00000001517	NARS	96	64.381	Vicugna_pacos
ENSODEG00000009131	-	69	86.471	ENSVVUG00000013821	-	99	86.471	Vulpes_vulpes
ENSODEG00000009131	-	99	80.418	ENSVVUG00000014959	-	100	78.175	Vulpes_vulpes
ENSODEG00000009131	-	99	70.722	ENSXETG00000027170	nars	94	70.722	Xenopus_tropicalis
ENSODEG00000009131	-	99	69.582	ENSXCOG00000006789	nars	97	69.582	Xiphophorus_couchianus
ENSODEG00000009131	-	99	69.392	ENSXMAG00000011755	nars	94	69.392	Xiphophorus_maculatus