EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSODEG00000009133 (Gene tree)
Gene ID
-
Gene Symbol
PRDM5
Alias
-
Full Name
PR/SET domain 5
Gene Type
protein_coding
Species
Octodon_degus
Status
putative
Strand
Plus strand
Length
207058 bases
Position
chrJH651711.1:1042873-1249930
Accession
101592008
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSODEP00000012316zf-C2H2PF00096.261.2e-49110
ENSODEP00000012316zf-C2H2PF00096.261.2e-49210
ENSODEP00000012316zf-C2H2PF00096.261.2e-49310
ENSODEP00000012316zf-C2H2PF00096.261.2e-49410
ENSODEP00000012316zf-C2H2PF00096.261.2e-49510
ENSODEP00000012316zf-C2H2PF00096.261.2e-49610
ENSODEP00000012316zf-C2H2PF00096.261.2e-49710
ENSODEP00000012316zf-C2H2PF00096.261.2e-49810
ENSODEP00000012316zf-C2H2PF00096.261.2e-49910
ENSODEP00000012316zf-C2H2PF00096.261.2e-491010
ENSODEP00000012317zf-C2H2PF00096.264.8e-2715
ENSODEP00000012317zf-C2H2PF00096.264.8e-2725
ENSODEP00000012317zf-C2H2PF00096.264.8e-2735
ENSODEP00000012317zf-C2H2PF00096.264.8e-2745
ENSODEP00000012317zf-C2H2PF00096.264.8e-2755
ENSODEP00000012316zf-metPF12874.71.9e-1613
ENSODEP00000012316zf-metPF12874.71.9e-1623
ENSODEP00000012316zf-metPF12874.71.9e-1633
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSODET00000012484PRDM5-202663-ENSODEP00000012317220 (aa)--
ENSODET00000012483PRDM5-2011245XM_004644243ENSODEP00000012316414 (aa)XP_004644300-
Gene Model
Click here to download ENSODEG00000009133's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000009133's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSODEG00000009133PRDM57340.323ENSODEG00000005837ZNF26348.182
ENSODEG00000009133PRDM58439.583ENSODEG00000002057ZNF4239837.736
ENSODEG00000009133PRDM57547.959ENSODEG00000008851-7347.959
ENSODEG00000009133PRDM56946.226ENSODEG00000014575-5344.094
ENSODEG00000009133PRDM56942.157ENSODEG00000003654-5342.157
ENSODEG00000009133PRDM57344.231ENSODEG00000013318ZNF5748230.247
ENSODEG00000009133PRDM57537.615ENSODEG00000005735ZFP647338.889
ENSODEG00000009133PRDM57441.176ENSODEG00000020561ZNF3198635.294
ENSODEG00000009133PRDM57444.615ENSODEG00000006410-9946.018
ENSODEG00000009133PRDM57342.231ENSODEG00000002735ZFP628648.571
ENSODEG00000009133PRDM57047.541ENSODEG00000015543-8547.541
ENSODEG00000009133PRDM57146.512ENSODEG00000009602ZNF817439.032
ENSODEG00000009133PRDM57146.809ENSODEG00000009193ZNF1127239.677
ENSODEG00000009133PRDM57331.532ENSODEG00000006725GTF3A6331.466
ENSODEG00000009133PRDM59036.680ENSODEG00000008278-9538.095
ENSODEG00000009133PRDM57843.254ENSODEG00000016460-8443.254
ENSODEG00000009133PRDM59432.927ENSODEG00000003245PRDM145532.927
ENSODEG00000009133PRDM56751.408ENSODEG00000017047-8751.408
ENSODEG00000009133PRDM57640.586ENSODEG00000014404ZFP17540.586
ENSODEG00000009133PRDM57536.264ENSODEG00000005309PRDM105932.984
ENSODEG00000009133PRDM57445.455ENSODEG00000000805-10045.455
ENSODEG00000009133PRDM57637.013ENSODEG00000014451MAZ9037.209
ENSODEG00000009133PRDM58140.909ENSODEG00000003589PATZ15330.964
ENSODEG00000009133PRDM57644.604ENSODEG00000009980ZNF5826840.711
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSODEG00000009133PRDM510099.051ENSG00000138738PRDM59999.051Homo_sapiens
ENSODEG00000009133PRDM510088.667ENSAPOG00000023220prdm59988.667Acanthochromis_polyacanthus
ENSODEG00000009133PRDM58791.509ENSAMEG00000003050PRDM510091.509Ailuropoda_melanoleuca
ENSODEG00000009133PRDM510088.667ENSACIG00000000406prdm59988.667Amphilophus_citrinellus
ENSODEG00000009133PRDM510088.667ENSAOCG00000014806prdm59988.667Amphiprion_ocellaris
ENSODEG00000009133PRDM510048.295ENSAPEG00000016846prdm59972.404Amphiprion_percula
ENSODEG00000009133PRDM510088.667ENSATEG00000013829prdm59988.667Anabas_testudineus
ENSODEG00000009133PRDM59389.557ENSAPLG00000013828PRDM510089.557Anas_platyrhynchos
ENSODEG00000009133PRDM510089.557ENSACAG00000012999PRDM59989.557Anolis_carolinensis
ENSODEG00000009133PRDM510098.667ENSANAG00000027411PRDM59998.667Aotus_nancymaae
ENSODEG00000009133PRDM510088.667ENSACLG00000017996prdm59988.667Astatotilapia_calliptera
ENSODEG00000009133PRDM58187.658ENSAMXG00000041864prdm58788.782Astyanax_mexicanus
ENSODEG00000009133PRDM510098.101ENSBTAG00000012111PRDM59998.101Bos_taurus
ENSODEG00000009133PRDM510098.551ENSCJAG00000003133PRDM59998.551Callithrix_jacchus
ENSODEG00000009133PRDM58798.492ENSCAFG00000004179PRDM59698.492Canis_familiaris
ENSODEG00000009133PRDM510098.734ENSCAFG00020017685PRDM59998.734Canis_lupus_dingo
ENSODEG00000009133PRDM510097.785ENSCHIG00000018772PRDM59997.785Capra_hircus
ENSODEG00000009133PRDM59297.710ENSTSYG00000009630PRDM59597.710Carlito_syrichta
ENSODEG00000009133PRDM58799.333ENSCAPG00000015217PRDM510099.474Cavia_aperea
ENSODEG00000009133PRDM59399.219ENSCPOG00000012883PRDM510099.474Cavia_porcellus
ENSODEG00000009133PRDM510098.792ENSCCAG00000023157PRDM59998.792Cebus_capucinus
ENSODEG00000009133PRDM510099.051ENSCATG00000042510PRDM59999.051Cercocebus_atys
ENSODEG00000009133PRDM59399.219ENSCLAG00000005392PRDM510099.474Chinchilla_lanigera
ENSODEG00000009133PRDM510098.667ENSCSAG00000003729PRDM59999.051Chlorocebus_sabaeus
ENSODEG00000009133PRDM510098.000ENSCHOG00000007801PRDM58998.000Choloepus_hoffmanni
ENSODEG00000009133PRDM510089.873ENSCPBG00000024735PRDM59989.873Chrysemys_picta_bellii
ENSODEG00000009133PRDM510099.051ENSCANG00000036807PRDM59999.051Colobus_angolensis_palliatus
ENSODEG00000009133PRDM510097.826ENSCGRG00001010581Prdm59997.826Cricetulus_griseus_chok1gshd
ENSODEG00000009133PRDM58996.667ENSCGRG00000010996-9998.155Cricetulus_griseus_crigri
ENSODEG00000009133PRDM510088.000ENSCSEG00000019979prdm59988.000Cynoglossus_semilaevis
ENSODEG00000009133PRDM510088.667ENSCVAG00000013692prdm59988.667Cyprinodon_variegatus
ENSODEG00000009133PRDM59890.411ENSDARG00000006288prdm59987.821Danio_rerio
ENSODEG00000009133PRDM58797.792ENSDNOG00000002009PRDM510097.792Dasypus_novemcinctus
ENSODEG00000009133PRDM510097.585ENSDORG00000007739Prdm59997.585Dipodomys_ordii
ENSODEG00000009133PRDM58998.291ENSETEG00000020268PRDM58091.304Echinops_telfairi
ENSODEG00000009133PRDM59989.262ENSEBUG00000004301prdm59989.262Eptatretus_burgeri
ENSODEG00000009133PRDM510098.734ENSEASG00005018365PRDM59998.734Equus_asinus_asinus
ENSODEG00000009133PRDM510086.747ENSECAG00000024747-9986.747Equus_caballus
ENSODEG00000009133PRDM59997.826ENSECAG00000011516PRDM59097.826Equus_caballus
ENSODEG00000009133PRDM59995.833ENSEEUG00000010306PRDM59995.833Erinaceus_europaeus
ENSODEG00000009133PRDM59891.803ENSELUG00000005894prdm59388.546Esox_lucius
ENSODEG00000009133PRDM510098.418ENSFCAG00000025656PRDM59998.418Felis_catus
ENSODEG00000009133PRDM59944.025ENSFALG00000008381PRDM59944.025Ficedula_albicollis
ENSODEG00000009133PRDM510099.333ENSFDAG00000021361PRDM59999.684Fukomys_damarensis
ENSODEG00000009133PRDM59890.411ENSFHEG00000013040prdm59990.411Fundulus_heteroclitus
ENSODEG00000009133PRDM59972.851ENSGMOG00000012038prdm510091.667Gadus_morhua
ENSODEG00000009133PRDM510089.333ENSGALG00000011963PRDM59989.333Gallus_gallus
ENSODEG00000009133PRDM59891.803ENSGAFG00000019233prdm59488.546Gambusia_affinis
ENSODEG00000009133PRDM59891.803ENSGAGG00000020362PRDM59991.803Gopherus_agassizii
ENSODEG00000009133PRDM510099.051ENSGGOG00000013562PRDM59999.051Gorilla_gorilla
ENSODEG00000009133PRDM510088.667ENSHBUG00000023375prdm59988.667Haplochromis_burtoni
ENSODEG00000009133PRDM510086.473ENSHGLG00000003010PRDM59992.271Heterocephalus_glaber_female
ENSODEG00000009133PRDM510099.367ENSHGLG00100003696PRDM59999.367Heterocephalus_glaber_male
ENSODEG00000009133PRDM59989.262ENSHCOG00000012131prdm59988.571Hippocampus_comes
ENSODEG00000009133PRDM59892.708ENSIPUG00000001248prdm59988.667Ictalurus_punctatus
ENSODEG00000009133PRDM59395.312ENSSTOG00000004741PRDM510096.316Ictidomys_tridecemlineatus
ENSODEG00000009133PRDM59397.917ENSJJAG00000011464Prdm510098.667Jaculus_jaculus
ENSODEG00000009133PRDM510088.000ENSKMAG00000013663prdm59988.000Kryptolebias_marmoratus
ENSODEG00000009133PRDM510088.667ENSLBEG00000022736prdm59988.667Labrus_bergylta
ENSODEG00000009133PRDM58789.873ENSLACG00000009187PRDM59989.873Latimeria_chalumnae
ENSODEG00000009133PRDM59989.262ENSLOCG00000009778prdm59989.262Lepisosteus_oculatus
ENSODEG00000009133PRDM510097.333ENSLAFG00000006532PRDM59998.418Loxodonta_africana
ENSODEG00000009133PRDM510099.051ENSMFAG00000045845PRDM59999.051Macaca_fascicularis
ENSODEG00000009133PRDM510099.051ENSMMUG00000003249PRDM59999.051Macaca_mulatta
ENSODEG00000009133PRDM510099.051ENSMNEG00000019018PRDM59999.051Macaca_nemestrina
ENSODEG00000009133PRDM59399.051ENSMLEG00000023145PRDM510099.051Mandrillus_leucophaeus
ENSODEG00000009133PRDM510088.000ENSMAMG00000013419prdm59988.000Mastacembelus_armatus
ENSODEG00000009133PRDM510088.667ENSMZEG00005020645prdm59988.667Maylandia_zebra
ENSODEG00000009133PRDM59389.241ENSMGAG00000010710PRDM510089.241Meleagris_gallopavo
ENSODEG00000009133PRDM510097.585ENSMAUG00000006768Prdm59997.585Mesocricetus_auratus
ENSODEG00000009133PRDM510099.333ENSMICG00000001459PRDM59999.333Microcebus_murinus
ENSODEG00000009133PRDM59999.000ENSMOCG00000016267Prdm59998.101Microtus_ochrogaster
ENSODEG00000009133PRDM510088.667ENSMMOG00000006035prdm59988.667Mola_mola
ENSODEG00000009133PRDM510088.667ENSMODG00000018942PRDM59988.667Monodelphis_domestica
ENSODEG00000009133PRDM510088.667ENSMALG00000013934prdm59988.667Monopterus_albus
ENSODEG00000009133PRDM510098.418MGP_CAROLIEiJ_G0028463Prdm510098.418Mus_caroli
ENSODEG00000009133PRDM510098.101ENSMUSG00000029913Prdm59998.101Mus_musculus
ENSODEG00000009133PRDM510098.068MGP_PahariEiJ_G0022203Prdm59998.418Mus_pahari
ENSODEG00000009133PRDM510098.101MGP_SPRETEiJ_G0029467Prdm59998.101Mus_spretus
ENSODEG00000009133PRDM510098.101ENSMPUG00000017415PRDM59998.101Mustela_putorius_furo
ENSODEG00000009133PRDM58790.312ENSMLUG00000006097PRDM510090.312Myotis_lucifugus
ENSODEG00000009133PRDM510097.343ENSNGAG00000018317Prdm59997.343Nannospalax_galili
ENSODEG00000009133PRDM510062.195ENSNBRG00000004976prdm59980.503Neolamprologus_brichardi
ENSODEG00000009133PRDM510099.051ENSNLEG00000009107PRDM59999.051Nomascus_leucogenys
ENSODEG00000009133PRDM59089.655ENSMEUG00000006576-7189.655Notamacropus_eugenii
ENSODEG00000009133PRDM583100.000ENSOPRG00000011066-60100.000Ochotona_princeps
ENSODEG00000009133PRDM510088.667ENSONIG00000003111prdm59987.975Oreochromis_niloticus
ENSODEG00000009133PRDM59990.452ENSOANG00000015109PRDM59790.909Ornithorhynchus_anatinus
ENSODEG00000009133PRDM57586.667ENSOANG00000006197-10086.667Ornithorhynchus_anatinus
ENSODEG00000009133PRDM59084.810ENSOCUG00000013454PRDM510087.342Oryctolagus_cuniculus
ENSODEG00000009133PRDM510088.667ENSORLG00000016247prdm59988.667Oryzias_latipes
ENSODEG00000009133PRDM510088.667ENSORLG00020018051prdm59988.667Oryzias_latipes_hni
ENSODEG00000009133PRDM510088.667ENSORLG00015013760prdm59988.667Oryzias_latipes_hsok
ENSODEG00000009133PRDM510088.667ENSOMEG00000005143prdm59988.667Oryzias_melastigma
ENSODEG00000009133PRDM57799.333ENSOGAG00000009996PRDM59399.333Otolemur_garnettii
ENSODEG00000009133PRDM59297.368ENSOARG00000015473PRDM510098.485Ovis_aries
ENSODEG00000009133PRDM59399.051ENSPPAG00000043045PRDM510099.051Pan_paniscus
ENSODEG00000009133PRDM510098.418ENSPPRG00000001020PRDM59998.418Panthera_pardus
ENSODEG00000009133PRDM59398.418ENSPTIG00000010807PRDM59598.418Panthera_tigris_altaica
ENSODEG00000009133PRDM510099.051ENSPTRG00000016403PRDM59999.051Pan_troglodytes
ENSODEG00000009133PRDM510099.051ENSPANG00000023612PRDM59999.051Papio_anubis
ENSODEG00000009133PRDM510087.288ENSPKIG00000015492prdm59987.288Paramormyrops_kingsleyae
ENSODEG00000009133PRDM510089.873ENSPSIG00000013505PRDM59989.873Pelodiscus_sinensis
ENSODEG00000009133PRDM510088.000ENSPMGG00000012622prdm59988.000Periophthalmus_magnuspinnatus
ENSODEG00000009133PRDM56890.722ENSPMAG00000005248prdm510090.722Petromyzon_marinus
ENSODEG00000009133PRDM59842.480ENSPFOG00000018630prdm59942.744Poecilia_formosa
ENSODEG00000009133PRDM510088.667ENSPLAG00000014148prdm59987.975Poecilia_latipinna
ENSODEG00000009133PRDM510088.667ENSPMEG00000018002prdm59988.667Poecilia_mexicana
ENSODEG00000009133PRDM510088.667ENSPREG00000018366prdm59988.667Poecilia_reticulata
ENSODEG00000009133PRDM510099.051ENSPPYG00000015031PRDM59999.051Pongo_abelii
ENSODEG00000009133PRDM58997.333ENSPCAG00000011671PRDM59697.333Procavia_capensis
ENSODEG00000009133PRDM510099.333ENSPCOG00000022828PRDM59999.333Propithecus_coquereli
ENSODEG00000009133PRDM59389.911ENSPVAG00000012309PRDM510089.911Pteropus_vampyrus
ENSODEG00000009133PRDM510088.667ENSPNYG00000012194prdm59988.667Pundamilia_nyererei
ENSODEG00000009133PRDM58786.301ENSPNAG00000023191-9786.301Pygocentrus_nattereri
ENSODEG00000009133PRDM59890.411ENSPNAG00000026181prdm59988.782Pygocentrus_nattereri
ENSODEG00000009133PRDM59992.933ENSRNOG00000023679Prdm59992.933Rattus_norvegicus
ENSODEG00000009133PRDM510099.051ENSRBIG00000041307PRDM59999.051Rhinopithecus_bieti
ENSODEG00000009133PRDM58987.356ENSRROG00000035343PRDM58897.973Rhinopithecus_roxellana
ENSODEG00000009133PRDM510098.734ENSSBOG00000022100PRDM59998.734Saimiri_boliviensis_boliviensis
ENSODEG00000009133PRDM58590.164ENSSHAG00000003250PRDM59990.164Sarcophilus_harrisii
ENSODEG00000009133PRDM510089.333ENSSFOG00015020478prdm59989.333Scleropages_formosus
ENSODEG00000009133PRDM510088.667ENSSMAG00000018844prdm59988.667Scophthalmus_maximus
ENSODEG00000009133PRDM59991.803ENSSDUG00000020397prdm59988.667Seriola_dumerili
ENSODEG00000009133PRDM59992.784ENSSLDG00000013353prdm59988.667Seriola_lalandi_dorsalis
ENSODEG00000009133PRDM593100.000ENSSARG00000014129-59100.000Sorex_araneus
ENSODEG00000009133PRDM510090.455ENSSPUG00000009941PRDM59990.455Sphenodon_punctatus
ENSODEG00000009133PRDM510088.667ENSSPAG00000013866prdm59987.658Stegastes_partitus
ENSODEG00000009133PRDM510098.734ENSSSCG00000009101PRDM59998.734Sus_scrofa
ENSODEG00000009133PRDM59389.557ENSTGUG00000001920PRDM510089.557Taeniopygia_guttata
ENSODEG00000009133PRDM510088.667ENSTRUG00000013850prdm59988.667Takifugu_rubripes
ENSODEG00000009133PRDM510074.834ENSTNIG00000005901prdm59970.189Tetraodon_nigroviridis
ENSODEG00000009133PRDM59376.510ENSTBEG00000015386PRDM58676.510Tupaia_belangeri
ENSODEG00000009133PRDM510098.101ENSTTRG00000010996PRDM59998.101Tursiops_truncatus
ENSODEG00000009133PRDM59297.351ENSUAMG00000009994PRDM58496.581Ursus_americanus
ENSODEG00000009133PRDM59398.958ENSUMAG00000003733PRDM59998.958Ursus_maritimus
ENSODEG00000009133PRDM59681.329ENSVPAG00000007435PRDM510082.000Vicugna_pacos
ENSODEG00000009133PRDM59098.734ENSVVUG00000013192PRDM510098.734Vulpes_vulpes
ENSODEG00000009133PRDM510082.278ENSXETG00000002101prdm59982.278Xenopus_tropicalis
ENSODEG00000009133PRDM510088.667ENSXCOG00000008567prdm59988.667Xiphophorus_couchianus
ENSODEG00000009133PRDM59891.803ENSXMAG00000013825prdm59988.667Xiphophorus_maculatus

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