EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000009192 (Gene tree)
Gene ID: 101577677
Gene Symbol: SHQ1
Alias: -
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 120633 bases
Position: chrJH651545.1:10755211-10875843
Accession: 101577677
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000012380	SHQ1	PF04925.15	1.3e-68	1	1
ENSODEP00000012381	SHQ1	PF04925.15	1.5e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000012550	SHQ1-202	1296	-	ENSODEP00000012381	431 (aa)	-	-
ENSODET00000012549	SHQ1-201	1629	XM_004629545	ENSODEP00000012380	542 (aa)	XP_004629602	-

Gene Model

Click here to download ENSODEG00000009192's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000009192's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000009192	SHQ1	98	85.950	ENSG00000144736	SHQ1	96	91.667	Homo_sapiens
ENSODEG00000009192	SHQ1	51	60.538	ENSAPOG00000000397	shq1	94	51.552	Acanthochromis_polyacanthus
ENSODEG00000009192	SHQ1	99	84.836	ENSAMEG00000015140	SHQ1	98	73.944	Ailuropoda_melanoleuca
ENSODEG00000009192	SHQ1	80	59.217	ENSACIG00000021249	shq1	74	57.709	Amphilophus_citrinellus
ENSODEG00000009192	SHQ1	55	60.251	ENSAOCG00000023311	shq1	94	52.316	Amphiprion_ocellaris
ENSODEG00000009192	SHQ1	95	61.883	ENSAPEG00000021686	shq1	94	52.076	Amphiprion_percula
ENSODEG00000009192	SHQ1	82	60.538	ENSATEG00000008475	shq1	74	59.603	Anabas_testudineus
ENSODEG00000009192	SHQ1	82	66.143	ENSAPLG00000013926	SHQ1	88	66.143	Anas_platyrhynchos
ENSODEG00000009192	SHQ1	71	77.027	ENSACAG00000014809	SHQ1	68	66.157	Anolis_carolinensis
ENSODEG00000009192	SHQ1	97	57.451	ENSANAG00000030500	-	98	54.466	Aotus_nancymaae
ENSODEG00000009192	SHQ1	98	83.607	ENSANAG00000029241	SHQ1	99	73.462	Aotus_nancymaae
ENSODEG00000009192	SHQ1	81	59.865	ENSACLG00000023077	shq1	72	58.901	Astatotilapia_calliptera
ENSODEG00000009192	SHQ1	79	53.364	ENSAMXG00000043822	shq1	91	47.664	Astyanax_mexicanus
ENSODEG00000009192	SHQ1	97	84.583	ENSBTAG00000005436	SHQ1	98	73.063	Bos_taurus
ENSODEG00000009192	SHQ1	79	33.409	WBGene00021655	Y48A5A.1	92	33.886	Caenorhabditis_elegans
ENSODEG00000009192	SHQ1	97	82.917	ENSCJAG00000015131	SHQ1	98	72.359	Callithrix_jacchus
ENSODEG00000009192	SHQ1	98	84.836	ENSCAFG00000006434	SHQ1	98	75.352	Canis_familiaris
ENSODEG00000009192	SHQ1	98	84.836	ENSCAFG00020016743	SHQ1	98	75.176	Canis_lupus_dingo
ENSODEG00000009192	SHQ1	97	85.417	ENSCHIG00000012271	SHQ1	89	73.592	Capra_hircus
ENSODEG00000009192	SHQ1	100	86.475	ENSTSYG00000014439	SHQ1	100	71.503	Carlito_syrichta
ENSODEG00000009192	SHQ1	91	69.171	ENSCAPG00000009343	SHQ1	98	91.558	Cavia_aperea
ENSODEG00000009192	SHQ1	100	88.525	ENSCPOG00000011443	SHQ1	100	78.328	Cavia_porcellus
ENSODEG00000009192	SHQ1	99	64.021	ENSCCAG00000027080	SHQ1	98	63.845	Cebus_capucinus
ENSODEG00000009192	SHQ1	97	57.500	ENSCCAG00000036087	-	97	54.355	Cebus_capucinus
ENSODEG00000009192	SHQ1	98	84.836	ENSCATG00000041238	SHQ1	98	73.286	Cercocebus_atys
ENSODEG00000009192	SHQ1	99	89.669	ENSCLAG00000004206	SHQ1	100	79.725	Chinchilla_lanigera
ENSODEG00000009192	SHQ1	77	81.290	ENSCSAG00000011514	SHQ1	98	70.000	Chlorocebus_sabaeus
ENSODEG00000009192	SHQ1	54	91.667	ENSCHOG00000003273	-	84	91.667	Choloepus_hoffmanni
ENSODEG00000009192	SHQ1	82	70.694	ENSCPBG00000006441	SHQ1	73	70.694	Chrysemys_picta_bellii
ENSODEG00000009192	SHQ1	63	57.627	ENSCING00000008013	-	96	40.359	Ciona_intestinalis
ENSODEG00000009192	SHQ1	66	67.442	ENSCSAVG00000002332	-	99	41.535	Ciona_savignyi
ENSODEG00000009192	SHQ1	98	84.426	ENSCANG00000039295	SHQ1	99	73.638	Colobus_angolensis_palliatus
ENSODEG00000009192	SHQ1	98	82.773	ENSCGRG00001012583	Shq1	97	82.773	Cricetulus_griseus_chok1gshd
ENSODEG00000009192	SHQ1	98	82.773	ENSCGRG00000009849	Shq1	97	82.773	Cricetulus_griseus_crigri
ENSODEG00000009192	SHQ1	82	60.179	ENSCSEG00000007829	shq1	78	57.841	Cynoglossus_semilaevis
ENSODEG00000009192	SHQ1	80	60.780	ENSCVAG00000020049	shq1	93	52.174	Cyprinodon_variegatus
ENSODEG00000009192	SHQ1	80	57.859	ENSDARG00000058522	shq1	76	54.684	Danio_rerio
ENSODEG00000009192	SHQ1	98	86.250	ENSDNOG00000033937	SHQ1	98	73.852	Dasypus_novemcinctus
ENSODEG00000009192	SHQ1	89	84.653	ENSETEG00000005766	SHQ1	98	63.298	Echinops_telfairi
ENSODEG00000009192	SHQ1	70	46.736	ENSEBUG00000005445	shq1	73	48.624	Eptatretus_burgeri
ENSODEG00000009192	SHQ1	98	85.656	ENSEASG00005002237	SHQ1	98	76.056	Equus_asinus_asinus
ENSODEG00000009192	SHQ1	98	86.066	ENSECAG00000015673	SHQ1	96	75.309	Equus_caballus
ENSODEG00000009192	SHQ1	99	83.817	ENSEEUG00000010568	SHQ1	99	72.504	Erinaceus_europaeus
ENSODEG00000009192	SHQ1	59	78.788	ENSELUG00000003476	shq1	81	57.881	Esox_lucius
ENSODEG00000009192	SHQ1	98	85.656	ENSFCAG00000012781	SHQ1	98	74.911	Felis_catus
ENSODEG00000009192	SHQ1	82	68.539	ENSFALG00000013428	SHQ1	73	68.161	Ficedula_albicollis
ENSODEG00000009192	SHQ1	99	86.777	ENSFDAG00000005595	SHQ1	92	75.168	Fukomys_damarensis
ENSODEG00000009192	SHQ1	93	55.274	ENSFHEG00000017552	shq1	94	50.446	Fundulus_heteroclitus
ENSODEG00000009192	SHQ1	61	78.049	ENSGMOG00000007350	shq1	100	58.586	Gadus_morhua
ENSODEG00000009192	SHQ1	96	72.174	ENSGALG00000007798	SHQ1	75	65.939	Gallus_gallus
ENSODEG00000009192	SHQ1	61	80.488	ENSGACG00000011797	shq1	100	59.848	Gasterosteus_aculeatus
ENSODEG00000009192	SHQ1	98	85.537	ENSGGOG00000034818	SHQ1	98	71.698	Gorilla_gorilla
ENSODEG00000009192	SHQ1	81	60.090	ENSHBUG00000010857	shq1	74	59.121	Haplochromis_burtoni
ENSODEG00000009192	SHQ1	99	88.430	ENSHGLG00000003637	SHQ1	91	78.388	Heterocephalus_glaber_female
ENSODEG00000009192	SHQ1	99	88.430	ENSHGLG00100011957	SHQ1	90	78.313	Heterocephalus_glaber_male
ENSODEG00000009192	SHQ1	90	57.143	ENSHCOG00000010799	shq1	73	59.217	Hippocampus_comes
ENSODEG00000009192	SHQ1	100	50.547	ENSIPUG00000001247	shq1	91	50.547	Ictalurus_punctatus
ENSODEG00000009192	SHQ1	98	81.148	ENSSTOG00000010043	SHQ1	99	71.168	Ictidomys_tridecemlineatus
ENSODEG00000009192	SHQ1	99	82.377	ENSJJAG00000017611	Shq1	99	73.535	Jaculus_jaculus
ENSODEG00000009192	SHQ1	93	58.898	ENSKMAG00000004457	shq1	94	52.135	Kryptolebias_marmoratus
ENSODEG00000009192	SHQ1	57	64.490	ENSLACG00000014243	SHQ1	86	55.439	Latimeria_chalumnae
ENSODEG00000009192	SHQ1	98	56.228	ENSLOCG00000009970	shq1	98	54.609	Lepisosteus_oculatus
ENSODEG00000009192	SHQ1	99	55.755	ENSMFAG00000037396	-	98	53.321	Macaca_fascicularis
ENSODEG00000009192	SHQ1	98	85.246	ENSMFAG00000039148	SHQ1	98	73.462	Macaca_fascicularis
ENSODEG00000009192	SHQ1	87	83.163	ENSMMUG00000009571	SHQ1	95	71.593	Macaca_mulatta
ENSODEG00000009192	SHQ1	99	55.576	ENSMMUG00000021761	-	98	53.142	Macaca_mulatta
ENSODEG00000009192	SHQ1	98	85.246	ENSMNEG00000032667	SHQ1	98	73.462	Macaca_nemestrina
ENSODEG00000009192	SHQ1	98	85.246	ENSMLEG00000038493	SHQ1	98	71.698	Mandrillus_leucophaeus
ENSODEG00000009192	SHQ1	94	58.333	ENSMAMG00000023432	shq1	87	53.097	Mastacembelus_armatus
ENSODEG00000009192	SHQ1	81	59.865	ENSMZEG00005008649	shq1	74	58.901	Maylandia_zebra
ENSODEG00000009192	SHQ1	96	71.739	ENSMGAG00000009640	SHQ1	93	58.554	Meleagris_gallopavo
ENSODEG00000009192	SHQ1	98	83.193	ENSMAUG00000022030	Shq1	99	71.777	Mesocricetus_auratus
ENSODEG00000009192	SHQ1	99	84.774	ENSMICG00000009224	SHQ1	98	72.522	Microcebus_murinus
ENSODEG00000009192	SHQ1	99	83.193	ENSMOCG00000017836	Shq1	99	71.503	Microtus_ochrogaster
ENSODEG00000009192	SHQ1	80	59.217	ENSMMOG00000010569	shq1	73	58.756	Mola_mola
ENSODEG00000009192	SHQ1	96	68.619	ENSMODG00000003926	SHQ1	80	72.422	Monodelphis_domestica
ENSODEG00000009192	SHQ1	100	51.499	ENSMALG00000008870	shq1	93	52.028	Monopterus_albus
ENSODEG00000009192	SHQ1	99	81.124	MGP_CAROLIEiJ_G0028689	Shq1	98	83.193	Mus_caroli
ENSODEG00000009192	SHQ1	99	81.124	ENSMUSG00000035378	Shq1	99	70.466	Mus_musculus
ENSODEG00000009192	SHQ1	99	83.058	MGP_PahariEiJ_G0022440	Shq1	99	70.588	Mus_pahari
ENSODEG00000009192	SHQ1	98	82.773	MGP_SPRETEiJ_G0029717	Shq1	99	70.345	Mus_spretus
ENSODEG00000009192	SHQ1	98	84.836	ENSMPUG00000017006	SHQ1	97	75.176	Mustela_putorius_furo
ENSODEG00000009192	SHQ1	85	78.894	ENSMLUG00000013539	SHQ1	96	68.381	Myotis_lucifugus
ENSODEG00000009192	SHQ1	98	81.328	ENSNGAG00000023317	Shq1	85	81.328	Nannospalax_galili
ENSODEG00000009192	SHQ1	65	57.983	ENSNBRG00000024004	shq1	70	56.831	Neolamprologus_brichardi
ENSODEG00000009192	SHQ1	98	86.777	ENSNLEG00000002731	SHQ1	98	72.384	Nomascus_leucogenys
ENSODEG00000009192	SHQ1	75	64.815	ENSMEUG00000009350	-	72	64.815	Notamacropus_eugenii
ENSODEG00000009192	SHQ1	81	59.417	ENSONIG00000020264	shq1	74	58.462	Oreochromis_niloticus
ENSODEG00000009192	SHQ1	98	84.711	ENSOCUG00000016695	SHQ1	98	71.134	Oryctolagus_cuniculus
ENSODEG00000009192	SHQ1	79	58.796	ENSORLG00000023538	shq1	80	57.753	Oryzias_latipes
ENSODEG00000009192	SHQ1	73	65.789	ENSORLG00020003697	shq1	79	58.652	Oryzias_latipes_hni
ENSODEG00000009192	SHQ1	79	59.491	ENSORLG00015021040	shq1	78	59.310	Oryzias_latipes_hsok
ENSODEG00000009192	SHQ1	79	59.629	ENSOMEG00000001225	shq1	80	57.812	Oryzias_melastigma
ENSODEG00000009192	SHQ1	98	84.211	ENSOGAG00000003898	SHQ1	99	73.030	Otolemur_garnettii
ENSODEG00000009192	SHQ1	97	84.298	ENSOARG00000009547	SHQ1	98	72.949	Ovis_aries
ENSODEG00000009192	SHQ1	98	86.364	ENSPPAG00000027714	SHQ1	98	71.698	Pan_paniscus
ENSODEG00000009192	SHQ1	99	58.259	ENSPPAG00000043263	-	98	55.062	Pan_paniscus
ENSODEG00000009192	SHQ1	98	85.656	ENSPPRG00000004769	SHQ1	98	74.035	Panthera_pardus
ENSODEG00000009192	SHQ1	96	80.172	ENSPTIG00000011478	SHQ1	98	70.370	Panthera_tigris_altaica
ENSODEG00000009192	SHQ1	98	86.364	ENSPTRG00000015106	SHQ1	98	71.698	Pan_troglodytes
ENSODEG00000009192	SHQ1	99	57.371	ENSPTRG00000048303	-	98	54.174	Pan_troglodytes
ENSODEG00000009192	SHQ1	98	83.197	ENSPANG00000002881	SHQ1	98	73.638	Papio_anubis
ENSODEG00000009192	SHQ1	90	59.641	ENSPKIG00000021517	shq1	72	57.627	Paramormyrops_kingsleyae
ENSODEG00000009192	SHQ1	83	70.067	ENSPSIG00000005536	SHQ1	74	70.044	Pelodiscus_sinensis
ENSODEG00000009192	SHQ1	71	71.264	ENSPMGG00000008838	shq1	77	56.579	Periophthalmus_magnuspinnatus
ENSODEG00000009192	SHQ1	98	83.613	ENSPEMG00000000251	Shq1	99	75.089	Peromyscus_maniculatus_bairdii
ENSODEG00000009192	SHQ1	80	55.850	ENSPMAG00000005372	shq1	99	56.071	Petromyzon_marinus
ENSODEG00000009192	SHQ1	74	66.250	ENSPFOG00000003118	shq1	97	51.306	Poecilia_formosa
ENSODEG00000009192	SHQ1	64	57.061	ENSPMEG00000011076	shq1	95	49.608	Poecilia_mexicana
ENSODEG00000009192	SHQ1	73	54.545	ENSPREG00000000591	shq1	92	48.665	Poecilia_reticulata
ENSODEG00000009192	SHQ1	98	85.537	ENSPPYG00000013717	SHQ1	98	71.698	Pongo_abelii
ENSODEG00000009192	SHQ1	95	85.833	ENSPCAG00000009035	SHQ1	99	72.759	Procavia_capensis
ENSODEG00000009192	SHQ1	99	84.082	ENSPCOG00000008415	SHQ1	99	72.680	Propithecus_coquereli
ENSODEG00000009192	SHQ1	98	84.426	ENSPVAG00000017392	SHQ1	98	73.545	Pteropus_vampyrus
ENSODEG00000009192	SHQ1	81	59.865	ENSPNYG00000003878	shq1	74	58.901	Pundamilia_nyererei
ENSODEG00000009192	SHQ1	79	58.199	ENSPNAG00000026840	shq1	90	49.910	Pygocentrus_nattereri
ENSODEG00000009192	SHQ1	99	81.818	ENSRNOG00000005433	Shq1	75	82.198	Rattus_norvegicus
ENSODEG00000009192	SHQ1	93	88.128	ENSRBIG00000026280	SHQ1	99	69.772	Rhinopithecus_bieti
ENSODEG00000009192	SHQ1	98	84.836	ENSRROG00000034126	SHQ1	99	73.989	Rhinopithecus_roxellana
ENSODEG00000009192	SHQ1	98	66.549	ENSSBOG00000021038	SHQ1	98	65.841	Saimiri_boliviensis_boliviensis
ENSODEG00000009192	SHQ1	81	73.016	ENSSHAG00000015077	SHQ1	79	72.646	Sarcophilus_harrisii
ENSODEG00000009192	SHQ1	100	58.491	ENSSFOG00015016241	shq1	94	54.396	Scleropages_formosus
ENSODEG00000009192	SHQ1	98	58.996	ENSSMAG00000016151	shq1	74	59.211	Scophthalmus_maximus
ENSODEG00000009192	SHQ1	79	61.574	ENSSDUG00000011986	shq1	70	61.697	Seriola_dumerili
ENSODEG00000009192	SHQ1	90	61.538	ENSSLDG00000013908	shq1	90	51.799	Seriola_lalandi_dorsalis
ENSODEG00000009192	SHQ1	88	79.253	ENSSARG00000007119	SHQ1	98	62.230	Sorex_araneus
ENSODEG00000009192	SHQ1	77	64.706	ENSSPUG00000011526	-	90	56.108	Sphenodon_punctatus
ENSODEG00000009192	SHQ1	97	85.232	ENSSSCG00000011518	SHQ1	98	73.030	Sus_scrofa
ENSODEG00000009192	SHQ1	82	67.038	ENSTGUG00000009933	SHQ1	77	67.706	Taeniopygia_guttata
ENSODEG00000009192	SHQ1	76	55.156	ENSTRUG00000009446	shq1	77	54.565	Takifugu_rubripes
ENSODEG00000009192	SHQ1	76	55.904	ENSTNIG00000007354	shq1	99	54.867	Tetraodon_nigroviridis
ENSODEG00000009192	SHQ1	77	95.745	ENSTBEG00000011295	SHQ1	78	95.745	Tupaia_belangeri
ENSODEG00000009192	SHQ1	96	85.356	ENSTTRG00000005320	SHQ1	98	72.695	Tursiops_truncatus
ENSODEG00000009192	SHQ1	98	80.321	ENSUMAG00000024031	SHQ1	97	73.002	Ursus_maritimus
ENSODEG00000009192	SHQ1	90	62.405	ENSVPAG00000004880	SHQ1	98	63.048	Vicugna_pacos
ENSODEG00000009192	SHQ1	98	84.426	ENSVVUG00000013906	SHQ1	98	75.176	Vulpes_vulpes
ENSODEG00000009192	SHQ1	82	64.108	ENSXETG00000032215	shq1	72	63.883	Xenopus_tropicalis