EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000009372 (Gene tree)
Gene ID: 101567360
Gene Symbol: -
Alias: -
Full Name: RNA binding motif protein 3
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 1925 bases
Position: chrJH651570.1:13407415-13409339
Accession: 101567360
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000012653	RRM_1	PF00076.22	3.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000012822	-	300	XM_012515236	ENSODEP00000012653	99 (aa)	XP_012370690	UPI0003340B13

Gene Model

Click here to download ENSODEG00000009372's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000009372's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000009372	-	100	61.972	ENSODEG00000003178	-	93	61.972
ENSODEG00000009372	-	100	59.236	ENSODEG00000020479	-	100	62.420
ENSODEG00000009372	-	61	58.333	ENSODEG00000005580	-	67	58.333
ENSODEG00000009372	-	90	37.762	ENSODEG00000011721	-	96	39.860
ENSODEG00000009372	-	65	60.938	ENSODEG00000000843	-	96	41.007
ENSODEG00000009372	-	100	56.688	ENSODEG00000019283	-	100	57.962
ENSODEG00000009372	-	67	66.667	ENSODEG00000003511	-	100	52.941
ENSODEG00000009372	-	100	95.385	ENSODEG00000019976	-	100	59.236
ENSODEG00000009372	-	72	37.500	ENSODEG00000006061	SRSF9	66	36.145
ENSODEG00000009372	-	65	70.312	ENSODEG00000012711	-	99	43.976
ENSODEG00000009372	-	100	57.325	ENSODEG00000019234	-	100	60.510

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000009372	-	67	96.970	ENSG00000102317	RBM3	100	60.510	Homo_sapiens
ENSODEG00000009372	-	100	53.788	ENSG00000099622	CIRBP	100	71.053	Homo_sapiens
ENSODEG00000009372	-	100	53.030	ENSAMEG00000003278	CIRBP	51	56.061	Ailuropoda_melanoleuca
ENSODEG00000009372	-	99	60.645	ENSAMEG00000012653	RBM3	96	62.581	Ailuropoda_melanoleuca
ENSODEG00000009372	-	100	48.649	ENSACAG00000023931	-	100	50.676	Anolis_carolinensis
ENSODEG00000009372	-	100	55.921	ENSACAG00000013718	-	100	58.170	Anolis_carolinensis
ENSODEG00000009372	-	65	70.312	ENSANAG00000027805	-	58	74.000	Aotus_nancymaae
ENSODEG00000009372	-	68	95.522	ENSANAG00000028883	-	74	95.522	Aotus_nancymaae
ENSODEG00000009372	-	100	49.057	ENSANAG00000028569	-	100	51.572	Aotus_nancymaae
ENSODEG00000009372	-	65	73.438	ENSBTAG00000007480	CIRBP	77	44.848	Bos_taurus
ENSODEG00000009372	-	93	96.923	ENSBTAG00000025848	RBM3	98	75.824	Bos_taurus
ENSODEG00000009372	-	68	95.522	ENSCJAG00000047341	-	74	95.522	Callithrix_jacchus
ENSODEG00000009372	-	100	54.362	ENSCAFG00000016002	-	100	55.705	Canis_familiaris
ENSODEG00000009372	-	100	56.173	ENSCAFG00000015485	RBM3	100	59.259	Canis_familiaris
ENSODEG00000009372	-	66	93.846	ENSCAFG00020020106	-	62	93.846	Canis_lupus_dingo
ENSODEG00000009372	-	91	75.824	ENSCAFG00020021344	-	98	75.824	Canis_lupus_dingo
ENSODEG00000009372	-	67	90.909	ENSCAFG00020017705	-	55	92.308	Canis_lupus_dingo
ENSODEG00000009372	-	93	96.923	ENSCHIG00000009007	RBM3	100	61.702	Capra_hircus
ENSODEG00000009372	-	65	73.438	ENSCHIG00000021288	CIRBP	96	44.848	Capra_hircus
ENSODEG00000009372	-	100	46.622	ENSTSYG00000034265	-	100	52.703	Carlito_syrichta
ENSODEG00000009372	-	100	57.447	ENSTSYG00000035938	-	100	59.574	Carlito_syrichta
ENSODEG00000009372	-	85	75.294	ENSTSYG00000031540	-	63	75.294	Carlito_syrichta
ENSODEG00000009372	-	100	56.391	ENSTSYG00000033076	-	100	58.647	Carlito_syrichta
ENSODEG00000009372	-	99	48.905	ENSTSYG00000027687	-	100	52.206	Carlito_syrichta
ENSODEG00000009372	-	91	78.022	ENSTSYG00000008670	-	98	78.022	Carlito_syrichta
ENSODEG00000009372	-	100	56.604	ENSCAPG00000005923	RBM3	100	59.748	Cavia_aperea
ENSODEG00000009372	-	100	57.233	ENSCPOG00000003553	RBM3	100	60.377	Cavia_porcellus
ENSODEG00000009372	-	68	94.030	ENSCCAG00000038019	-	74	94.030	Cebus_capucinus
ENSODEG00000009372	-	100	49.333	ENSCCAG00000035552	-	100	49.333	Cebus_capucinus
ENSODEG00000009372	-	67	96.970	ENSCATG00000029986	-	74	95.522	Cercocebus_atys
ENSODEG00000009372	-	67	96.970	ENSCATG00000038524	-	99	58.974	Cercocebus_atys
ENSODEG00000009372	-	65	71.875	ENSCLAG00000016087	CIRBP	99	44.578	Chinchilla_lanigera
ENSODEG00000009372	-	100	59.873	ENSCLAG00000002908	RBM3	100	62.420	Chinchilla_lanigera
ENSODEG00000009372	-	67	96.970	ENSCSAG00000013242	RBM3	100	60.510	Chlorocebus_sabaeus
ENSODEG00000009372	-	66	93.846	ENSCHOG00000007642	RBM3	100	58.974	Choloepus_hoffmanni
ENSODEG00000009372	-	100	47.682	ENSCPBG00000021863	-	100	50.336	Chrysemys_picta_bellii
ENSODEG00000009372	-	66	89.231	ENSCPBG00000021859	RBM3	100	57.143	Chrysemys_picta_bellii
ENSODEG00000009372	-	100	49.645	ENSCANG00000031890	-	100	49.645	Colobus_angolensis_palliatus
ENSODEG00000009372	-	67	96.970	ENSCANG00000037907	-	74	95.522	Colobus_angolensis_palliatus
ENSODEG00000009372	-	65	73.438	ENSCANG00000037000	CIRBP	58	43.976	Colobus_angolensis_palliatus
ENSODEG00000009372	-	67	95.455	ENSCANG00000014668	-	100	59.236	Colobus_angolensis_palliatus
ENSODEG00000009372	-	100	60.897	ENSCGRG00001018909	Rbm3	100	63.462	Cricetulus_griseus_chok1gshd
ENSODEG00000009372	-	100	60.897	ENSCGRG00000014636	Rbm3	100	63.462	Cricetulus_griseus_crigri
ENSODEG00000009372	-	98	48.966	ENSDNOG00000043650	-	95	48.966	Dasypus_novemcinctus
ENSODEG00000009372	-	100	58.974	ENSDNOG00000010420	-	73	61.538	Dasypus_novemcinctus
ENSODEG00000009372	-	100	58.974	ENSDNOG00000032565	-	100	60.897	Dasypus_novemcinctus
ENSODEG00000009372	-	100	55.769	ENSDNOG00000040748	-	74	58.333	Dasypus_novemcinctus
ENSODEG00000009372	-	85	41.844	ENSDNOG00000037833	-	94	43.262	Dasypus_novemcinctus
ENSODEG00000009372	-	100	49.359	ENSDNOG00000040058	-	97	49.359	Dasypus_novemcinctus
ENSODEG00000009372	-	99	54.194	ENSDNOG00000035132	-	88	56.774	Dasypus_novemcinctus
ENSODEG00000009372	-	99	58.065	ENSDNOG00000041625	-	73	58.974	Dasypus_novemcinctus
ENSODEG00000009372	-	99	58.710	ENSDNOG00000048200	-	74	60.897	Dasypus_novemcinctus
ENSODEG00000009372	-	91	84.483	ENSDNOG00000040147	-	82	47.619	Dasypus_novemcinctus
ENSODEG00000009372	-	99	59.355	ENSDNOG00000042033	-	72	59.355	Dasypus_novemcinctus
ENSODEG00000009372	-	100	52.288	ENSDNOG00000033435	-	96	54.248	Dasypus_novemcinctus
ENSODEG00000009372	-	99	60.000	ENSDNOG00000049801	-	96	60.000	Dasypus_novemcinctus
ENSODEG00000009372	-	67	98.485	ENSDORG00000000182	Rbm3	100	62.420	Dipodomys_ordii
ENSODEG00000009372	-	68	65.672	ENSEASG00005023389	-	55	67.692	Equus_asinus_asinus
ENSODEG00000009372	-	100	58.553	ENSEASG00005008251	RBM3	100	58.553	Equus_asinus_asinus
ENSODEG00000009372	-	66	64.615	ENSECAG00000038298	-	51	64.615	Equus_caballus
ENSODEG00000009372	-	91	78.022	ENSECAG00000024257	RBM3	98	78.022	Equus_caballus
ENSODEG00000009372	-	68	65.672	ENSECAG00000002141	-	78	65.672	Equus_caballus
ENSODEG00000009372	-	68	94.030	ENSFCAG00000030938	-	73	94.030	Felis_catus
ENSODEG00000009372	-	65	79.688	ENSFCAG00000021952	-	72	79.688	Felis_catus
ENSODEG00000009372	-	93	100.000	ENSFCAG00000002245	RBM3	100	61.250	Felis_catus
ENSODEG00000009372	-	100	49.306	ENSFALG00000014000	CIRBP	96	50.694	Ficedula_albicollis
ENSODEG00000009372	-	65	73.438	ENSFDAG00000002848	CIRBP	97	45.181	Fukomys_damarensis
ENSODEG00000009372	-	100	59.873	ENSFDAG00000007909	RBM3	100	62.420	Fukomys_damarensis
ENSODEG00000009372	-	100	47.682	ENSGAGG00000016473	-	100	50.336	Gopherus_agassizii
ENSODEG00000009372	-	66	90.769	ENSGAGG00000016475	RBM3	100	58.170	Gopherus_agassizii
ENSODEG00000009372	-	65	73.438	ENSGGOG00000002338	CIRBP	56	43.976	Gorilla_gorilla
ENSODEG00000009372	-	67	96.970	ENSGGOG00000005864	RBM3	74	95.522	Gorilla_gorilla
ENSODEG00000009372	-	65	77.273	ENSGGOG00000025080	-	55	77.273	Gorilla_gorilla
ENSODEG00000009372	-	100	54.487	ENSHGLG00000006552	RBM3	100	62.420	Heterocephalus_glaber_female
ENSODEG00000009372	-	100	66.187	ENSHGLG00000010919	-	100	66.187	Heterocephalus_glaber_female
ENSODEG00000009372	-	65	73.438	ENSHGLG00000005839	CIRBP	99	45.181	Heterocephalus_glaber_female
ENSODEG00000009372	-	100	51.592	ENSHGLG00000013635	-	100	51.592	Heterocephalus_glaber_female
ENSODEG00000009372	-	100	51.592	ENSHGLG00100015330	-	100	51.592	Heterocephalus_glaber_male
ENSODEG00000009372	-	100	54.140	ENSHGLG00100017487	-	100	62.420	Heterocephalus_glaber_male
ENSODEG00000009372	-	100	66.187	ENSHGLG00100014556	-	100	66.187	Heterocephalus_glaber_male
ENSODEG00000009372	-	65	73.438	ENSHGLG00100004955	CIRBP	99	45.181	Heterocephalus_glaber_male
ENSODEG00000009372	-	65	73.438	ENSSTOG00000027646	CIRBP	97	45.181	Ictidomys_tridecemlineatus
ENSODEG00000009372	-	100	60.256	ENSSTOG00000027493	-	100	62.821	Ictidomys_tridecemlineatus
ENSODEG00000009372	-	100	53.191	ENSJJAG00000022888	-	100	53.191	Jaculus_jaculus
ENSODEG00000009372	-	100	60.256	ENSJJAG00000012962	-	100	62.821	Jaculus_jaculus
ENSODEG00000009372	-	63	77.419	ENSLOCG00000000112	-	51	77.419	Lepisosteus_oculatus
ENSODEG00000009372	-	100	63.636	ENSLAFG00000007003	-	100	63.636	Loxodonta_africana
ENSODEG00000009372	-	98	54.967	ENSLAFG00000029211	-	99	54.967	Loxodonta_africana
ENSODEG00000009372	-	67	96.970	ENSMFAG00000003694	RBM3	74	95.522	Macaca_fascicularis
ENSODEG00000009372	-	65	73.438	ENSMFAG00000034048	CIRBP	59	43.976	Macaca_fascicularis
ENSODEG00000009372	-	68	95.522	ENSMMUG00000018349	-	74	95.522	Macaca_mulatta
ENSODEG00000009372	-	67	96.970	ENSMMUG00000037648	-	99	60.256	Macaca_mulatta
ENSODEG00000009372	-	65	73.438	ENSMMUG00000022101	CIRBP	100	65.625	Macaca_mulatta
ENSODEG00000009372	-	67	96.970	ENSMNEG00000000984	-	99	60.256	Macaca_nemestrina
ENSODEG00000009372	-	67	96.970	ENSMNEG00000042115	-	74	95.522	Macaca_nemestrina
ENSODEG00000009372	-	67	96.970	ENSMLEG00000041745	-	74	95.522	Mandrillus_leucophaeus
ENSODEG00000009372	-	99	55.769	ENSMLEG00000027951	-	99	58.333	Mandrillus_leucophaeus
ENSODEG00000009372	-	100	60.897	ENSMAUG00000016488	-	100	63.462	Mesocricetus_auratus
ENSODEG00000009372	-	100	62.411	ENSMAUG00000008646	-	100	62.411	Mesocricetus_auratus
ENSODEG00000009372	-	95	73.404	ENSMICG00000028982	-	93	73.404	Microcebus_murinus
ENSODEG00000009372	-	100	59.524	ENSMICG00000045835	-	100	59.524	Microcebus_murinus
ENSODEG00000009372	-	67	98.485	ENSMICG00000047440	-	100	62.025	Microcebus_murinus
ENSODEG00000009372	-	65	71.875	ENSMICG00000038000	CIRBP	97	45.181	Microcebus_murinus
ENSODEG00000009372	-	100	60.256	ENSMOCG00000001511	Rbm3	100	62.821	Microtus_ochrogaster
ENSODEG00000009372	-	65	71.875	ENSMODG00000005290	CIRBP	72	43.373	Monodelphis_domestica
ENSODEG00000009372	-	65	75.000	MGP_CAROLIEiJ_G0015568	Cirbp	59	75.000	Mus_caroli
ENSODEG00000009372	-	91	78.022	MGP_CAROLIEiJ_G0032914	-	98	78.022	Mus_caroli
ENSODEG00000009372	-	91	78.022	ENSMUSG00000031167	Rbm3	98	78.022	Mus_musculus
ENSODEG00000009372	-	65	75.000	ENSMUSG00000045193	Cirbp	59	75.000	Mus_musculus
ENSODEG00000009372	-	91	78.022	MGP_PahariEiJ_G0031463	Rbm3	98	78.022	Mus_pahari
ENSODEG00000009372	-	65	75.000	MGP_PahariEiJ_G0030981	Cirbp	59	75.000	Mus_pahari
ENSODEG00000009372	-	65	75.000	MGP_SPRETEiJ_G0016386	Cirbp	59	75.000	Mus_spretus
ENSODEG00000009372	-	91	78.022	MGP_SPRETEiJ_G0034063	Rbm3	98	78.022	Mus_spretus
ENSODEG00000009372	-	100	59.615	ENSMPUG00000013632	RBM3	100	62.179	Mustela_putorius_furo
ENSODEG00000009372	-	67	98.485	ENSMLUG00000003996	RBM3	96	62.581	Myotis_lucifugus
ENSODEG00000009372	-	100	59.615	ENSNGAG00000012951	Rbm3	100	62.821	Nannospalax_galili
ENSODEG00000009372	-	67	92.424	ENSNLEG00000019350	-	100	57.962	Nomascus_leucogenys
ENSODEG00000009372	-	67	96.970	ENSNLEG00000028027	-	74	95.522	Nomascus_leucogenys
ENSODEG00000009372	-	100	54.795	ENSNLEG00000031601	-	100	54.795	Nomascus_leucogenys
ENSODEG00000009372	-	66	42.735	ENSOANG00000012483	RBM3	95	43.103	Ornithorhynchus_anatinus
ENSODEG00000009372	-	67	72.727	ENSOCUG00000027309	-	99	46.939	Oryctolagus_cuniculus
ENSODEG00000009372	-	99	58.710	ENSOCUG00000002271	RBM3	96	61.290	Oryctolagus_cuniculus
ENSODEG00000009372	-	100	61.538	ENSOGAG00000026654	RBM3	100	62.179	Otolemur_garnettii
ENSODEG00000009372	-	92	96.923	ENSOARG00000012250	RBM3	96	59.119	Ovis_aries
ENSODEG00000009372	-	65	73.438	ENSOARG00000011412	CIRBP	85	44.848	Ovis_aries
ENSODEG00000009372	-	66	76.923	ENSPPAG00000036405	-	55	76.923	Pan_paniscus
ENSODEG00000009372	-	65	73.438	ENSPPAG00000033562	CIRBP	66	43.902	Pan_paniscus
ENSODEG00000009372	-	67	96.970	ENSPPAG00000034179	RBM3	74	95.522	Pan_paniscus
ENSODEG00000009372	-	93	100.000	ENSPPRG00000013315	RBM3	100	61.250	Panthera_pardus
ENSODEG00000009372	-	68	91.045	ENSPPRG00000011438	-	57	91.045	Panthera_pardus
ENSODEG00000009372	-	91	74.725	ENSPPRG00000013361	-	98	74.725	Panthera_pardus
ENSODEG00000009372	-	93	100.000	ENSPTIG00000017702	RBM3	100	61.250	Panthera_tigris_altaica
ENSODEG00000009372	-	67	96.970	ENSPTRG00000021864	RBM3	74	95.522	Pan_troglodytes
ENSODEG00000009372	-	65	73.438	ENSPTRG00000010192	CIRBP	66	43.902	Pan_troglodytes
ENSODEG00000009372	-	66	76.923	ENSPTRG00000044048	-	55	76.923	Pan_troglodytes
ENSODEG00000009372	-	67	96.970	ENSPANG00000034727	-	74	95.522	Papio_anubis
ENSODEG00000009372	-	100	60.000	ENSPANG00000010520	-	100	62.667	Papio_anubis
ENSODEG00000009372	-	65	73.438	ENSPANG00000032449	CIRBP	57	43.976	Papio_anubis
ENSODEG00000009372	-	98	50.442	ENSPKIG00000024430	CIRBP	86	50.893	Paramormyrops_kingsleyae
ENSODEG00000009372	-	66	89.231	ENSPSIG00000007145	RBM3	96	56.494	Pelodiscus_sinensis
ENSODEG00000009372	-	100	60.897	ENSPEMG00000012411	Rbm3	100	63.462	Peromyscus_maniculatus_bairdii
ENSODEG00000009372	-	65	71.875	ENSPCIG00000011223	-	71	44.242	Phascolarctos_cinereus
ENSODEG00000009372	-	92	60.000	ENSPPYG00000000510	-	98	60.000	Pongo_abelii
ENSODEG00000009372	-	67	96.970	ENSPPYG00000020314	RBM3	74	95.522	Pongo_abelii
ENSODEG00000009372	-	68	95.522	ENSPCOG00000017170	-	78	95.522	Propithecus_coquereli
ENSODEG00000009372	-	65	71.875	ENSPCOG00000028262	CIRBP	99	45.181	Propithecus_coquereli
ENSODEG00000009372	-	100	63.014	ENSPCOG00000013194	-	100	64.384	Propithecus_coquereli
ENSODEG00000009372	-	67	96.970	ENSPCOG00000014346	-	100	61.392	Propithecus_coquereli
ENSODEG00000009372	-	100	59.615	ENSPVAG00000015630	RBM3	100	62.821	Pteropus_vampyrus
ENSODEG00000009372	-	68	97.015	ENSRNOG00000005387	Rbm3	100	63.462	Rattus_norvegicus
ENSODEG00000009372	-	67	96.970	ENSRBIG00000040498	RBM3	74	95.522	Rhinopithecus_bieti
ENSODEG00000009372	-	67	96.970	ENSRROG00000034767	RBM3	74	95.522	Rhinopithecus_roxellana
ENSODEG00000009372	-	99	46.207	ENSRROG00000035651	-	98	46.207	Rhinopithecus_roxellana
ENSODEG00000009372	-	66	92.308	ENSSBOG00000035691	-	66	89.552	Saimiri_boliviensis_boliviensis
ENSODEG00000009372	-	68	92.537	ENSSBOG00000020829	-	80	92.537	Saimiri_boliviensis_boliviensis
ENSODEG00000009372	-	100	53.030	ENSSBOG00000021043	CIRBP	56	56.061	Saimiri_boliviensis_boliviensis
ENSODEG00000009372	-	65	71.875	ENSSHAG00000006035	CIRBP	97	43.976	Sarcophilus_harrisii
ENSODEG00000009372	-	67	69.697	ENSSPUG00000000450	-	81	69.697	Sphenodon_punctatus
ENSODEG00000009372	-	100	55.263	ENSSPUG00000000444	RBM3	100	55.921	Sphenodon_punctatus
ENSODEG00000009372	-	94	87.879	ENSSSCG00000030003	-	100	54.487	Sus_scrofa
ENSODEG00000009372	-	91	76.923	ENSSSCG00000021591	-	98	76.923	Sus_scrofa
ENSODEG00000009372	-	100	57.333	ENSSSCG00000005430	-	100	59.333	Sus_scrofa
ENSODEG00000009372	-	65	73.438	ENSSSCG00000013427	CIRBP	50	70.149	Sus_scrofa
ENSODEG00000009372	-	100	59.615	ENSTTRG00000008587	RBM3	100	62.179	Tursiops_truncatus
ENSODEG00000009372	-	100	59.615	ENSUAMG00000013289	RBM3	100	62.821	Ursus_americanus
ENSODEG00000009372	-	65	73.438	ENSUAMG00000014659	CIRBP	53	43.373	Ursus_americanus
ENSODEG00000009372	-	100	59.615	ENSUMAG00000007785	RBM3	100	62.821	Ursus_maritimus
ENSODEG00000009372	-	68	91.045	ENSVVUG00000006737	-	77	91.045	Vulpes_vulpes
ENSODEG00000009372	-	91	78.022	ENSVVUG00000017670	RBM3	98	78.022	Vulpes_vulpes