EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000009407 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 1238 bases
Position: chrJH651595.1:6981445-6982682
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000012705	Ribosomal_S3Ae	PF01015.18	8.5e-82	1	1
ENSODEP00000012704	Ribosomal_S3Ae	PF01015.18	1.5e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000012874	-	603	-	ENSODEP00000012705	200 (aa)	-	-
ENSODET00000012873	-	354	-	ENSODEP00000012704	117 (aa)	-	-

Gene Model

Click here to download ENSODEG00000009407's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000009407's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000009407	-	92	98.370	ENSODEG00000020008	-	70	98.370
ENSODEG00000009407	-	92	98.370	ENSODEG00000018901	-	70	98.370
ENSODEG00000009407	-	92	100.000	ENSODEG00000004947	RPS3A	70	100.000
ENSODEG00000009407	-	92	99.457	ENSODEG00000019309	-	70	99.457
ENSODEG00000009407	-	77	100.000	ENSODEG00000005672	-	96	100.000
ENSODEG00000009407	-	77	96.667	ENSODEG00000009040	-	100	94.815
ENSODEG00000009407	-	74	98.639	ENSODEG00000010978	-	65	98.639
ENSODEG00000009407	-	92	98.370	ENSODEG00000019506	-	73	98.370
ENSODEG00000009407	-	92	98.370	ENSODEG00000018607	-	70	98.370
ENSODEG00000009407	-	92	99.457	ENSODEG00000018727	-	70	99.457
ENSODEG00000009407	-	77	97.778	ENSODEG00000007996	-	96	97.826

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000009407	-	99	96.482	ENSANAG00000034457	-	99	96.482	Aotus_nancymaae
ENSODEG00000009407	-	100	97.000	ENSCAPG00000011956	-	100	97.000	Cavia_aperea
ENSODEG00000009407	-	99	93.970	ENSCCAG00000032295	-	99	93.970	Cebus_capucinus
ENSODEG00000009407	-	99	93.467	ENSCANG00000032048	-	99	93.467	Colobus_angolensis_palliatus
ENSODEG00000009407	-	99	87.940	ENSGGOG00000028270	-	99	87.940	Gorilla_gorilla
ENSODEG00000009407	-	99	96.985	ENSMMUG00000009272	-	99	96.985	Macaca_mulatta
ENSODEG00000009407	-	99	93.939	ENSMNEG00000043648	-	95	93.939	Macaca_nemestrina
ENSODEG00000009407	-	99	94.444	ENSMLEG00000034553	-	95	94.444	Mandrillus_leucophaeus
ENSODEG00000009407	-	99	97.487	ENSPPAG00000005749	-	99	97.487	Pan_paniscus
ENSODEG00000009407	-	99	95.477	ENSPPAG00000034286	-	99	95.477	Pan_paniscus
ENSODEG00000009407	-	92	60.541	YML063W	RPS1B	72	60.000	Saccharomyces_cerevisiae
ENSODEG00000009407	-	92	61.081	YLR441C	RPS1A	72	59.459	Saccharomyces_cerevisiae
ENSODEG00000009407	-	92	65.405	ENSSLDG00000011590	-	74	65.405	Seriola_lalandi_dorsalis
ENSODEG00000009407	-	92	100.000	ENSVVUG00000025107	-	92	100.000	Vulpes_vulpes