EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSODEG00000009433 (Gene tree)
Gene ID
101580929
Gene Symbol
RBFOX3
Alias
FOX-3|HRNBP3|NeuN
Full Name
RNA binding fox-1 homolog 3
Gene Type
protein_coding
Species
Octodon_degus
Status
putative
Strand
Plus strand
Length
21278 bases
Position
chrJH651627.1:9262673-9283950
Accession
101580929
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSODEP00000012745Fox-1_CPF12414.83.5e-4611
ENSODEP00000012746Fox-1_CPF12414.84.1e-4211
ENSODEP00000012747Fox-1_CPF12414.84.5e-4211
ENSODEP00000012745RRM_1PF00076.228e-1911
ENSODEP00000012747RRM_1PF00076.221.1e-1811
ENSODEP00000012746RRM_1PF00076.220.0001511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSODET00000012915RBFOX3-2021080XM_004639517ENSODEP00000012746329 (aa)XP_004639574UPI0003340613
ENSODET00000012914RBFOX3-2011183XM_004639520ENSODEP00000012745313 (aa)XP_004639577UPI0003337BD4
ENSODET00000012916RBFOX3-2031125XM_004639518ENSODEP00000012747374 (aa)XP_004639575UPI000333C830
Gene Model
Click here to download ENSODEG00000009433's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000009433's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSODEG00000009433RBFOX310070.760ENSODEG00000013166RBFOX18270.948
ENSODEG00000009433RBFOX39660.694ENSODEG00000009937RBFOX28759.649
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSODEG00000009433RBFOX310098.176ENSG00000167281RBFOX310098.730Homo_sapiens
ENSODEG00000009433RBFOX310082.222ENSAPOG00000021630rbfox3b8181.728Acanthochromis_polyacanthus
ENSODEG00000009433RBFOX37989.583ENSAPOG00000015658-8968.810Acanthochromis_polyacanthus
ENSODEG00000009433RBFOX310091.843ENSAMEG00000014170RBFOX38491.843Ailuropoda_melanoleuca
ENSODEG00000009433RBFOX39569.716ENSACIG00000003768-8369.536Amphilophus_citrinellus
ENSODEG00000009433RBFOX310077.778ENSACIG00000010817rbfox3b9477.076Amphilophus_citrinellus
ENSODEG00000009433RBFOX39577.741ENSAOCG00000010786-7977.741Amphiprion_ocellaris
ENSODEG00000009433RBFOX310082.222ENSAOCG00000012358rbfox3b8181.728Amphiprion_ocellaris
ENSODEG00000009433RBFOX37889.583ENSAPEG00000015891-7971.517Amphiprion_percula
ENSODEG00000009433RBFOX310072.698ENSAPEG00000019081rbfox3b7493.333Amphiprion_percula
ENSODEG00000009433RBFOX310072.754ENSATEG00000019945rbfox3b9572.810Anabas_testudineus
ENSODEG00000009433RBFOX39577.409ENSATEG00000023101-9277.409Anabas_testudineus
ENSODEG00000009433RBFOX310089.524ENSACAG00000016093RBFOX38390.667Anolis_carolinensis
ENSODEG00000009433RBFOX310097.264ENSANAG00000023457RBFOX310097.125Aotus_nancymaae
ENSODEG00000009433RBFOX310081.329ENSACLG00000025552-8181.395Astatotilapia_calliptera
ENSODEG00000009433RBFOX310081.587ENSACLG00000020011rbfox3b9581.395Astatotilapia_calliptera
ENSODEG00000009433RBFOX310076.266ENSAMXG00000042841rbfox3b8576.080Astyanax_mexicanus
ENSODEG00000009433RBFOX39583.498ENSAMXG00000037246rbfox3a9083.498Astyanax_mexicanus
ENSODEG00000009433RBFOX310096.353ENSBTAG00000006280RBFOX310096.353Bos_taurus
ENSODEG00000009433RBFOX310097.264ENSCJAG00000009563RBFOX310097.264Callithrix_jacchus
ENSODEG00000009433RBFOX37698.326ENSCAFG00000005547RBFOX38598.326Canis_familiaris
ENSODEG00000009433RBFOX310097.861ENSCAFG00020008126RBFOX310097.861Canis_lupus_dingo
ENSODEG00000009433RBFOX310096.524ENSCHIG00000009124RBFOX310096.524Capra_hircus
ENSODEG00000009433RBFOX310099.088ENSTSYG00000029617RBFOX310099.088Carlito_syrichta
ENSODEG00000009433RBFOX35498.817ENSCAPG00000010217RBFOX310098.817Cavia_aperea
ENSODEG00000009433RBFOX310098.936ENSCPOG00000021703RBFOX310098.936Cavia_porcellus
ENSODEG00000009433RBFOX310097.264ENSCCAG00000028450RBFOX310097.264Cebus_capucinus
ENSODEG00000009433RBFOX310098.083ENSCATG00000018349RBFOX310098.083Cercocebus_atys
ENSODEG00000009433RBFOX3100100.000ENSCLAG00000006449RBFOX3100100.000Chinchilla_lanigera
ENSODEG00000009433RBFOX310098.403ENSCSAG00000002355RBFOX310098.403Chlorocebus_sabaeus
ENSODEG00000009433RBFOX39588.926ENSCPBG00000010904RBFOX39590.268Chrysemys_picta_bellii
ENSODEG00000009433RBFOX310098.663ENSCANG00000043120RBFOX310098.663Colobus_angolensis_palliatus
ENSODEG00000009433RBFOX310096.533ENSCGRG00001019476Rbfox310096.533Cricetulus_griseus_chok1gshd
ENSODEG00000009433RBFOX310096.533ENSCGRG00000003268Rbfox310096.533Cricetulus_griseus_crigri
ENSODEG00000009433RBFOX310066.352ENSCSEG00000020606RBFOX38369.338Cynoglossus_semilaevis
ENSODEG00000009433RBFOX310078.797ENSCSEG00000015567RBFOX38077.741Cynoglossus_semilaevis
ENSODEG00000009433RBFOX310082.222ENSCVAG00000006882rbfox3b8181.728Cyprinodon_variegatus
ENSODEG00000009433RBFOX39582.508ENSDARG00000010083rbfox3a9481.230Danio_rerio
ENSODEG00000009433RBFOX310072.204ENSDARG00000074310rbfox3b9676.339Danio_rerio
ENSODEG00000009433RBFOX38782.622ENSDNOG00000039391RBFOX39081.416Dasypus_novemcinctus
ENSODEG00000009433RBFOX39685.515ENSDORG00000005352Rbfox39685.515Dipodomys_ordii
ENSODEG00000009433RBFOX310071.037ENSEBUG00000002129RBFOX38873.163Eptatretus_burgeri
ENSODEG00000009433RBFOX38562.182ENSEBUG00000013559RBFOX37163.672Eptatretus_burgeri
ENSODEG00000009433RBFOX310097.771ENSEASG00005005059RBFOX310097.771Equus_asinus_asinus
ENSODEG00000009433RBFOX310098.089ENSECAG00000023811RBFOX310098.089Equus_caballus
ENSODEG00000009433RBFOX39882.740ENSEEUG00000013974RBFOX39882.740Erinaceus_europaeus
ENSODEG00000009433RBFOX36163.158ENSELUG00000009807-5067.059Esox_lucius
ENSODEG00000009433RBFOX310081.013ENSELUG00000017963rbfox3b9570.764Esox_lucius
ENSODEG00000009433RBFOX310096.166ENSFCAG00000002555RBFOX310096.166Felis_catus
ENSODEG00000009433RBFOX39573.939ENSFALG00000012288RBFOX38174.242Ficedula_albicollis
ENSODEG00000009433RBFOX310093.883ENSFDAG00000007489RBFOX310093.883Fukomys_damarensis
ENSODEG00000009433RBFOX310072.698ENSFHEG00000008550rbfox3b9571.761Fundulus_heteroclitus
ENSODEG00000009433RBFOX310063.228ENSGMOG00000019304-9968.580Gadus_morhua
ENSODEG00000009433RBFOX39590.604ENSGALG00000032889RBFOX38392.953Gallus_gallus
ENSODEG00000009433RBFOX39780.130ENSGAFG00000005025rbfox3b8680.399Gambusia_affinis
ENSODEG00000009433RBFOX39672.802ENSGACG00000002138-9672.802Gasterosteus_aculeatus
ENSODEG00000009433RBFOX39588.926ENSGAGG00000020025RBFOX39590.268Gopherus_agassizii
ENSODEG00000009433RBFOX310098.396ENSGGOG00000012546RBFOX310098.396Gorilla_gorilla
ENSODEG00000009433RBFOX310081.013ENSHBUG00000023098-8681.063Haplochromis_burtoni
ENSODEG00000009433RBFOX310081.587ENSHBUG00000018099rbfox3b8181.395Haplochromis_burtoni
ENSODEG00000009433RBFOX310097.619ENSHGLG00000008679RBFOX310097.619Heterocephalus_glaber_female
ENSODEG00000009433RBFOX39893.496ENSHGLG00100014739RBFOX39893.767Heterocephalus_glaber_male
ENSODEG00000009433RBFOX310070.886ENSHCOG00000001863RBFOX38683.333Hippocampus_comes
ENSODEG00000009433RBFOX39676.333ENSHCOG00000007444RBFOX37676.159Hippocampus_comes
ENSODEG00000009433RBFOX39582.178ENSIPUG00000012010rbfox3a9082.178Ictalurus_punctatus
ENSODEG00000009433RBFOX310065.797ENSIPUG00000021966rbfox3b8875.527Ictalurus_punctatus
ENSODEG00000009433RBFOX39896.721ENSSTOG00000026817RBFOX310097.297Ictidomys_tridecemlineatus
ENSODEG00000009433RBFOX310097.594ENSJJAG00000014167Rbfox310097.594Jaculus_jaculus
ENSODEG00000009433RBFOX310082.222ENSKMAG00000006726rbfox3b8181.728Kryptolebias_marmoratus
ENSODEG00000009433RBFOX310081.905ENSLBEG00000004030rbfox3b9476.744Labrus_bergylta
ENSODEG00000009433RBFOX39582.392ENSLBEG00000022508-8182.392Labrus_bergylta
ENSODEG00000009433RBFOX39578.221ENSLACG00000018409-8378.221Latimeria_chalumnae
ENSODEG00000009433RBFOX39587.043ENSLOCG00000012267rbfox3a9087.043Lepisosteus_oculatus
ENSODEG00000009433RBFOX310096.257ENSLAFG00000016623RBFOX310096.257Loxodonta_africana
ENSODEG00000009433RBFOX39698.056ENSMFAG00000002247RBFOX310098.056Macaca_fascicularis
ENSODEG00000009433RBFOX310098.176ENSMMUG00000023028RBFOX310098.176Macaca_mulatta
ENSODEG00000009433RBFOX310097.764ENSMNEG00000041147RBFOX310097.764Macaca_nemestrina
ENSODEG00000009433RBFOX310098.083ENSMLEG00000025686RBFOX310098.083Mandrillus_leucophaeus
ENSODEG00000009433RBFOX310077.316ENSMAMG00000019810rbfox3b9476.510Mastacembelus_armatus
ENSODEG00000009433RBFOX39576.744ENSMAMG00000020600-8576.744Mastacembelus_armatus
ENSODEG00000009433RBFOX310081.587ENSMZEG00005000781rbfox3b8181.395Maylandia_zebra
ENSODEG00000009433RBFOX39559.091ENSMZEG00005003055-6677.326Maylandia_zebra
ENSODEG00000009433RBFOX36190.625ENSMGAG00000005600RBFOX37390.625Meleagris_gallopavo
ENSODEG00000009433RBFOX39695.556ENSMAUG00000013543Rbfox39695.556Mesocricetus_auratus
ENSODEG00000009433RBFOX310097.059ENSMICG00000014898RBFOX310097.059Microcebus_murinus
ENSODEG00000009433RBFOX310096.524ENSMOCG00000015373Rbfox310096.524Microtus_ochrogaster
ENSODEG00000009433RBFOX310079.688ENSMMOG00000020193rbfox3b8179.868Mola_mola
ENSODEG00000009433RBFOX39591.275ENSMODG00000002089RBFOX38393.624Monodelphis_domestica
ENSODEG00000009433RBFOX310082.595ENSMALG00000018270-9176.821Monopterus_albus
ENSODEG00000009433RBFOX310081.270ENSMALG00000020407rbfox3b8180.731Monopterus_albus
ENSODEG00000009433RBFOX310097.059MGP_CAROLIEiJ_G0017487Rbfox310097.633Mus_caroli
ENSODEG00000009433RBFOX310096.791ENSMUSG00000025576Rbfox310097.241Mus_musculus
ENSODEG00000009433RBFOX310097.333MGP_PahariEiJ_G0018614Rbfox310097.931Mus_pahari
ENSODEG00000009433RBFOX310097.326MGP_SPRETEiJ_G0018331Rbfox310097.633Mus_spretus
ENSODEG00000009433RBFOX310087.143ENSMPUG00000012319RBFOX39187.143Mustela_putorius_furo
ENSODEG00000009433RBFOX310097.326ENSNGAG00000018006Rbfox310097.326Nannospalax_galili
ENSODEG00000009433RBFOX310080.317ENSNBRG00000010102rbfox3b7492.593Neolamprologus_brichardi
ENSODEG00000009433RBFOX310074.051ENSNBRG00000022885-8286.364Neolamprologus_brichardi
ENSODEG00000009433RBFOX310068.889ENSNLEG00000000153-79100.000Nomascus_leucogenys
ENSODEG00000009433RBFOX39266.377ENSMEUG00000004218-9666.667Notamacropus_eugenii
ENSODEG00000009433RBFOX37697.753ENSOPRG00000016279-7597.753Ochotona_princeps
ENSODEG00000009433RBFOX310082.222ENSONIG00000009549rbfox3b9676.648Oreochromis_niloticus
ENSODEG00000009433RBFOX310081.962ENSONIG00000007282-8782.060Oreochromis_niloticus
ENSODEG00000009433RBFOX37681.469ENSOCUG00000014217RBFOX38280.132Oryctolagus_cuniculus
ENSODEG00000009433RBFOX310081.962ENSORLG00000000905rbfox3b6481.395Oryzias_latipes
ENSODEG00000009433RBFOX310081.962ENSORLG00020018030rbfox3b8181.395Oryzias_latipes_hni
ENSODEG00000009433RBFOX310081.646ENSORLG00015009200rbfox3b9181.250Oryzias_latipes_hsok
ENSODEG00000009433RBFOX37675.969ENSOMEG00000014677rbfox3b7676.995Oryzias_melastigma
ENSODEG00000009433RBFOX310097.125ENSOGAG00000029595RBFOX38497.125Otolemur_garnettii
ENSODEG00000009433RBFOX36594.737ENSOARG00000002908RBFOX39257.722Ovis_aries
ENSODEG00000009433RBFOX39298.020ENSPPAG00000025383RBFOX39997.902Pan_paniscus
ENSODEG00000009433RBFOX39793.438ENSPPRG00000007819RBFOX310094.167Panthera_pardus
ENSODEG00000009433RBFOX310098.396ENSPTRG00000009727RBFOX310098.396Pan_troglodytes
ENSODEG00000009433RBFOX310098.083ENSPANG00000019837RBFOX310098.083Papio_anubis
ENSODEG00000009433RBFOX310067.192ENSPKIG00000022633-8067.559Paramormyrops_kingsleyae
ENSODEG00000009433RBFOX39585.050ENSPKIG00000010299rbfox3a7884.307Paramormyrops_kingsleyae
ENSODEG00000009433RBFOX38581.716ENSPMGG00000008000rbfox3b7781.818Periophthalmus_magnuspinnatus
ENSODEG00000009433RBFOX310096.791ENSPEMG00000010500Rbfox310096.791Peromyscus_maniculatus_bairdii
ENSODEG00000009433RBFOX35675.263ENSPMAG00000008689rbfox3b9377.895Petromyzon_marinus
ENSODEG00000009433RBFOX39593.631ENSPCIG00000005766RBFOX39694.203Phascolarctos_cinereus
ENSODEG00000009433RBFOX310082.222ENSPFOG00000018294rbfox3b9270.625Poecilia_formosa
ENSODEG00000009433RBFOX37780.000ENSPLAG00000000481rbfox3b7580.000Poecilia_latipinna
ENSODEG00000009433RBFOX310072.698ENSPMEG00000022997rbfox3b9571.761Poecilia_mexicana
ENSODEG00000009433RBFOX310082.595ENSPREG00000012886rbfox3b8682.060Poecilia_reticulata
ENSODEG00000009433RBFOX39191.608ENSPPYG00000008704RBFOX38491.608Pongo_abelii
ENSODEG00000009433RBFOX39292.754ENSPCAG00000001401RBFOX39692.754Procavia_capensis
ENSODEG00000009433RBFOX310097.264ENSPCOG00000012689RBFOX310097.222Propithecus_coquereli
ENSODEG00000009433RBFOX39285.838ENSPVAG00000015243RBFOX39687.861Pteropus_vampyrus
ENSODEG00000009433RBFOX310070.570ENSPNYG00000010414rbfox3b7492.593Pundamilia_nyererei
ENSODEG00000009433RBFOX310074.921ENSPNYG00000009079-7884.444Pundamilia_nyererei
ENSODEG00000009433RBFOX310064.762ENSPNAG00000018173rbfox3b8564.765Pygocentrus_nattereri
ENSODEG00000009433RBFOX39583.168ENSPNAG00000002889rbfox3a8183.168Pygocentrus_nattereri
ENSODEG00000009433RBFOX310097.333ENSRNOG00000003386Rbfox310097.333Rattus_norvegicus
ENSODEG00000009433RBFOX310098.403ENSRBIG00000040449RBFOX38798.403Rhinopithecus_bieti
ENSODEG00000009433RBFOX310098.403ENSRROG00000000766RBFOX310098.403Rhinopithecus_roxellana
ENSODEG00000009433RBFOX310097.594ENSSBOG00000031591RBFOX310097.594Saimiri_boliviensis_boliviensis
ENSODEG00000009433RBFOX39583.939ENSSHAG00000016076RBFOX39583.221Sarcophilus_harrisii
ENSODEG00000009433RBFOX39585.714ENSSFOG00015023260rbfox3a8185.714Scleropages_formosus
ENSODEG00000009433RBFOX39668.106ENSSFOG00015004716RBFOX38470.333Scleropages_formosus
ENSODEG00000009433RBFOX310077.711ENSSMAG00000012618rbfox3b7177.918Scophthalmus_maximus
ENSODEG00000009433RBFOX310079.114ENSSMAG00000019052-9578.738Scophthalmus_maximus
ENSODEG00000009433RBFOX39575.415ENSSDUG00000015801-8181.481Seriola_dumerili
ENSODEG00000009433RBFOX310072.698ENSSDUG00000023183rbfox3b9571.761Seriola_dumerili
ENSODEG00000009433RBFOX310082.222ENSSLDG00000000149rbfox3b8181.728Seriola_lalandi_dorsalis
ENSODEG00000009433RBFOX39577.741ENSSLDG00000016098-8377.409Seriola_lalandi_dorsalis
ENSODEG00000009433RBFOX39590.000ENSSPUG00000011733RBFOX39591.333Sphenodon_punctatus
ENSODEG00000009433RBFOX38774.453ENSSPAG00000004898-8174.453Stegastes_partitus
ENSODEG00000009433RBFOX310072.698ENSSPAG00000017571rbfox3b7971.761Stegastes_partitus
ENSODEG00000009433RBFOX38896.970ENSSSCG00000039498RBFOX310096.970Sus_scrofa
ENSODEG00000009433RBFOX310077.532ENSTRUG00000004894rbfox3b8675.974Takifugu_rubripes
ENSODEG00000009433RBFOX310072.989ENSTNIG00000011278rbfox3b8272.973Tetraodon_nigroviridis
ENSODEG00000009433RBFOX39269.369ENSTBEG00000004296-9663.788Tupaia_belangeri
ENSODEG00000009433RBFOX39290.725ENSTTRG00000003676RBFOX39691.014Tursiops_truncatus
ENSODEG00000009433RBFOX310097.125ENSUAMG00000004668RBFOX310097.125Ursus_americanus
ENSODEG00000009433RBFOX310097.444ENSVVUG00000017864RBFOX310097.444Vulpes_vulpes
ENSODEG00000009433RBFOX310066.864ENSXETG00000020236rbfox39159.897Xenopus_tropicalis
ENSODEG00000009433RBFOX310080.696ENSXCOG00000018262rbfox3b9576.000Xiphophorus_couchianus
ENSODEG00000009433RBFOX310082.222ENSXMAG00000012939rbfox3b8181.728Xiphophorus_maculatus

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