EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000009446 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 839 bases
Position: chrJH651585.1:5429020-5429858
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000012764	CMS1	PF14617.6	5.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000012933	-	717	-	ENSODEP00000012764	238 (aa)	-	-

Gene Model

Click here to download ENSODEG00000009446's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000009446's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000009446	-	100	74.910	ENSODEG00000005226	-	100	74.910
ENSODEG00000009446	-	100	67.279	ENSODEG00000001853	-	100	67.279
ENSODEG00000009446	-	100	74.539	ENSODEG00000003558	-	100	74.539

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000009446	-	100	69.534	ENSG00000184220	CMSS1	99	77.778	Homo_sapiens
ENSODEG00000009446	-	78	54.950	ENSAPOG00000010604	cmss1	82	54.950	Acanthochromis_polyacanthus
ENSODEG00000009446	-	93	72.093	ENSAMEG00000004092	CMSS1	99	72.093	Ailuropoda_melanoleuca
ENSODEG00000009446	-	78	47.030	ENSACIG00000021854	cmss1	87	44.206	Amphilophus_citrinellus
ENSODEG00000009446	-	100	44.983	ENSAOCG00000013361	cmss1	100	45.675	Amphiprion_ocellaris
ENSODEG00000009446	-	100	44.828	ENSAPEG00000005829	cmss1	100	45.517	Amphiprion_percula
ENSODEG00000009446	-	80	56.311	ENSATEG00000008209	cmss1	100	45.329	Anabas_testudineus
ENSODEG00000009446	-	84	58.333	ENSAPLG00000010542	CMSS1	94	58.333	Anas_platyrhynchos
ENSODEG00000009446	-	89	56.957	ENSACAG00000011065	CMSS1	84	56.957	Anolis_carolinensis
ENSODEG00000009446	-	100	68.929	ENSANAG00000023565	CMSS1	100	68.929	Aotus_nancymaae
ENSODEG00000009446	-	100	42.268	ENSACLG00000027294	cmss1	100	41.924	Astatotilapia_calliptera
ENSODEG00000009446	-	77	45.000	ENSAMXG00000002046	cmss1	69	45.545	Astyanax_mexicanus
ENSODEG00000009446	-	100	70.251	ENSBTAG00000013663	CMSS1	100	70.251	Bos_taurus
ENSODEG00000009446	-	100	69.286	ENSCJAG00000000610	CMSS1	100	69.286	Callithrix_jacchus
ENSODEG00000009446	-	93	71.206	ENSCAFG00000009230	CMSS1	93	71.206	Canis_familiaris
ENSODEG00000009446	-	93	74.793	ENSCAFG00020009464	-	88	74.793	Canis_lupus_dingo
ENSODEG00000009446	-	84	75.115	ENSCAFG00020024156	-	68	75.115	Canis_lupus_dingo
ENSODEG00000009446	-	94	69.884	ENSCHIG00000013003	CMSS1	94	69.884	Capra_hircus
ENSODEG00000009446	-	93	73.967	ENSTSYG00000009266	CMSS1	93	73.967	Carlito_syrichta
ENSODEG00000009446	-	85	65.297	ENSCAPG00000013584	CMSS1	87	71.658	Cavia_aperea
ENSODEG00000009446	-	100	73.118	ENSCPOG00000014680	CMSS1	100	73.118	Cavia_porcellus
ENSODEG00000009446	-	100	69.643	ENSCCAG00000034685	CMSS1	100	69.643	Cebus_capucinus
ENSODEG00000009446	-	100	69.892	ENSCATG00000031980	CMSS1	100	69.892	Cercocebus_atys
ENSODEG00000009446	-	85	82.110	ENSCLAG00000011241	CMSS1	94	82.110	Chinchilla_lanigera
ENSODEG00000009446	-	92	75.630	ENSCSAG00000006024	CMSS1	97	75.630	Chlorocebus_sabaeus
ENSODEG00000009446	-	100	53.405	ENSCHOG00000012098	CMSS1	100	53.405	Choloepus_hoffmanni
ENSODEG00000009446	-	76	33.668	ENSCING00000014848	-	96	35.196	Ciona_intestinalis
ENSODEG00000009446	-	100	70.251	ENSCANG00000031337	CMSS1	100	70.251	Colobus_angolensis_palliatus
ENSODEG00000009446	-	100	62.724	ENSCGRG00001014305	Cmss1	100	63.669	Cricetulus_griseus_chok1gshd
ENSODEG00000009446	-	93	67.220	ENSCGRG00000006722	Cmss1	94	67.635	Cricetulus_griseus_crigri
ENSODEG00000009446	-	100	42.177	ENSCSEG00000004958	cmss1	100	42.177	Cynoglossus_semilaevis
ENSODEG00000009446	-	100	43.750	ENSCVAG00000005039	cmss1	100	44.674	Cyprinodon_variegatus
ENSODEG00000009446	-	78	45.050	ENSDARG00000112579	cmss1	100	39.384	Danio_rerio
ENSODEG00000009446	-	85	77.523	ENSDNOG00000040418	CMSS1	79	77.523	Dasypus_novemcinctus
ENSODEG00000009446	-	100	69.534	ENSDORG00000010461	Cmss1	100	69.534	Dipodomys_ordii
ENSODEG00000009446	-	54	36.806	ENSEBUG00000002156	-	100	36.806	Eptatretus_burgeri
ENSODEG00000009446	-	86	79.091	ENSEASG00005010966	CMSS1	100	79.091	Equus_asinus_asinus
ENSODEG00000009446	-	95	71.094	ENSECAG00000015662	CMSS1	96	79.817	Equus_caballus
ENSODEG00000009446	-	83	80.233	ENSEEUG00000007624	-	80	80.233	Erinaceus_europaeus
ENSODEG00000009446	-	78	51.485	ENSELUG00000019459	cmss1	81	47.951	Esox_lucius
ENSODEG00000009446	-	100	73.477	ENSFCAG00000044577	CMSS1	100	73.477	Felis_catus
ENSODEG00000009446	-	85	55.046	ENSFALG00000005816	CMSS1	92	55.046	Ficedula_albicollis
ENSODEG00000009446	-	85	81.651	ENSFDAG00000012577	CMSS1	96	81.651	Fukomys_damarensis
ENSODEG00000009446	-	88	53.509	ENSFHEG00000012008	cmss1	94	53.509	Fundulus_heteroclitus
ENSODEG00000009446	-	78	50.990	ENSGMOG00000016729	cmss1	100	43.728	Gadus_morhua
ENSODEG00000009446	-	85	58.257	ENSGALG00000015267	CMSS1	84	58.257	Gallus_gallus
ENSODEG00000009446	-	80	56.039	ENSGAFG00000021217	cmss1	77	55.446	Gambusia_affinis
ENSODEG00000009446	-	99	38.194	ENSGACG00000002798	cmss1	100	41.219	Gasterosteus_aculeatus
ENSODEG00000009446	-	78	61.881	ENSGAGG00000019861	CMSS1	93	55.556	Gopherus_agassizii
ENSODEG00000009446	-	85	79.817	ENSGGOG00000014125	CMSS1	99	69.884	Gorilla_gorilla
ENSODEG00000009446	-	100	42.759	ENSHBUG00000008431	cmss1	100	42.414	Haplochromis_burtoni
ENSODEG00000009446	-	91	76.327	ENSHGLG00000019481	CMSS1	100	76.327	Heterocephalus_glaber_female
ENSODEG00000009446	-	93	75.502	ENSHGLG00100010314	CMSS1	100	75.502	Heterocephalus_glaber_male
ENSODEG00000009446	-	100	43.729	ENSHCOG00000003222	cmss1	100	44.407	Hippocampus_comes
ENSODEG00000009446	-	100	39.655	ENSIPUG00000011591	cmss1	100	40.000	Ictalurus_punctatus
ENSODEG00000009446	-	100	71.223	ENSSTOG00000019366	CMSS1	100	71.223	Ictidomys_tridecemlineatus
ENSODEG00000009446	-	100	67.742	ENSJJAG00000014894	Cmss1	100	67.742	Jaculus_jaculus
ENSODEG00000009446	-	88	43.265	ENSKMAG00000002390	cmss1	96	41.532	Kryptolebias_marmoratus
ENSODEG00000009446	-	78	51.232	ENSLBEG00000006298	cmss1	98	47.280	Labrus_bergylta
ENSODEG00000009446	-	85	55.046	ENSLACG00000009293	CMSS1	95	55.046	Latimeria_chalumnae
ENSODEG00000009446	-	100	44.170	ENSLOCG00000009391	cmss1	100	44.876	Lepisosteus_oculatus
ENSODEG00000009446	-	85	79.358	ENSLAFG00000017509	CMSS1	96	79.358	Loxodonta_africana
ENSODEG00000009446	-	100	70.609	ENSMFAG00000045006	CMSS1	100	70.609	Macaca_fascicularis
ENSODEG00000009446	-	100	70.251	ENSMMUG00000002939	CMSS1	92	79.227	Macaca_mulatta
ENSODEG00000009446	-	100	70.251	ENSMNEG00000031315	CMSS1	100	70.251	Macaca_nemestrina
ENSODEG00000009446	-	100	69.892	ENSMLEG00000033660	CMSS1	100	69.892	Mandrillus_leucophaeus
ENSODEG00000009446	-	100	45.172	ENSMAMG00000017176	cmss1	100	44.483	Mastacembelus_armatus
ENSODEG00000009446	-	100	42.268	ENSMZEG00005021886	cmss1	100	41.924	Maylandia_zebra
ENSODEG00000009446	-	78	58.416	ENSMGAG00000014360	CMSS1	89	58.416	Meleagris_gallopavo
ENSODEG00000009446	-	100	50.183	ENSMAUG00000020609	Cmss1	100	50.183	Mesocricetus_auratus
ENSODEG00000009446	-	100	71.223	ENSMICG00000048977	CMSS1	100	71.223	Microcebus_murinus
ENSODEG00000009446	-	100	66.304	ENSMOCG00000021937	Cmss1	100	66.304	Microtus_ochrogaster
ENSODEG00000009446	-	78	53.234	ENSMMOG00000019794	cmss1	99	47.755	Mola_mola
ENSODEG00000009446	-	91	63.136	ENSMODG00000002275	CMSS1	89	63.136	Monodelphis_domestica
ENSODEG00000009446	-	100	43.643	ENSMALG00000004250	cmss1	100	44.330	Monopterus_albus
ENSODEG00000009446	-	100	64.621	MGP_CAROLIEiJ_G0020824	Cmss1	100	66.065	Mus_caroli
ENSODEG00000009446	-	100	67.148	ENSMUSG00000022748	Cmss1	100	67.148	Mus_musculus
ENSODEG00000009446	-	100	64.621	MGP_PahariEiJ_G0016524	Cmss1	100	66.065	Mus_pahari
ENSODEG00000009446	-	100	65.343	MGP_SPRETEiJ_G0021724	Cmss1	100	66.787	Mus_spretus
ENSODEG00000009446	-	84	82.028	ENSMPUG00000011324	CMSS1	84	82.028	Mustela_putorius_furo
ENSODEG00000009446	-	85	79.545	ENSMLUG00000001131	CMSS1	84	79.545	Myotis_lucifugus
ENSODEG00000009446	-	100	65.950	ENSNGAG00000020316	Cmss1	100	65.950	Nannospalax_galili
ENSODEG00000009446	-	100	41.924	ENSNBRG00000003095	cmss1	100	41.581	Neolamprologus_brichardi
ENSODEG00000009446	-	100	71.326	ENSNLEG00000034172	CMSS1	100	71.326	Nomascus_leucogenys
ENSODEG00000009446	-	86	55.455	ENSMEUG00000014505	CMSS1	96	55.455	Notamacropus_eugenii
ENSODEG00000009446	-	100	71.583	ENSOPRG00000002986	CMSS1	100	71.583	Ochotona_princeps
ENSODEG00000009446	-	78	51.980	ENSONIG00000006678	cmss1	93	46.914	Oreochromis_niloticus
ENSODEG00000009446	-	97	58.468	ENSOANG00000007529	CMSS1	97	62.389	Ornithorhynchus_anatinus
ENSODEG00000009446	-	85	78.440	ENSOCUG00000025366	CMSS1	79	78.440	Oryctolagus_cuniculus
ENSODEG00000009446	-	100	45.263	ENSORLG00000020340	cmss1	100	46.316	Oryzias_latipes
ENSODEG00000009446	-	87	52.336	ENSORLG00020012235	cmss1	85	53.886	Oryzias_latipes_hni
ENSODEG00000009446	-	78	53.535	ENSORLG00015015551	cmss1	75	53.535	Oryzias_latipes_hsok
ENSODEG00000009446	-	100	44.983	ENSOMEG00000012555	cmss1	100	44.983	Oryzias_melastigma
ENSODEG00000009446	-	85	78.899	ENSOGAG00000002045	CMSS1	96	78.899	Otolemur_garnettii
ENSODEG00000009446	-	94	70.385	ENSOARG00000017899	CMSS1	89	70.385	Ovis_aries
ENSODEG00000009446	-	85	79.817	ENSPPAG00000038515	CMSS1	96	68.421	Pan_paniscus
ENSODEG00000009446	-	100	73.835	ENSPPRG00000016767	CMSS1	100	73.835	Panthera_pardus
ENSODEG00000009446	-	100	73.477	ENSPTIG00000018274	CMSS1	100	73.477	Panthera_tigris_altaica
ENSODEG00000009446	-	100	70.251	ENSPTRG00000015157	CMSS1	100	70.251	Pan_troglodytes
ENSODEG00000009446	-	93	72.177	ENSPANG00000019980	CMSS1	99	72.177	Papio_anubis
ENSODEG00000009446	-	87	53.363	ENSPKIG00000012609	cmss1	97	47.104	Paramormyrops_kingsleyae
ENSODEG00000009446	-	85	61.009	ENSPSIG00000003849	CMSS1	95	61.009	Pelodiscus_sinensis
ENSODEG00000009446	-	87	50.893	ENSPMGG00000010286	cmss1	97	50.893	Periophthalmus_magnuspinnatus
ENSODEG00000009446	-	100	65.714	ENSPEMG00000016384	Cmss1	100	65.714	Peromyscus_maniculatus_bairdii
ENSODEG00000009446	-	79	44.118	ENSPMAG00000001146	cmss1	99	44.554	Petromyzon_marinus
ENSODEG00000009446	-	97	60.729	ENSPCIG00000015656	CMSS1	94	60.729	Phascolarctos_cinereus
ENSODEG00000009446	-	100	44.755	ENSPFOG00000016849	cmss1	100	47.203	Poecilia_formosa
ENSODEG00000009446	-	100	44.406	ENSPLAG00000008323	cmss1	100	46.853	Poecilia_latipinna
ENSODEG00000009446	-	78	54.950	ENSPMEG00000021020	cmss1	100	46.875	Poecilia_mexicana
ENSODEG00000009446	-	78	54.455	ENSPREG00000007618	cmss1	69	54.455	Poecilia_reticulata
ENSODEG00000009446	-	100	69.534	ENSPPYG00000013606	CMSS1	100	69.534	Pongo_abelii
ENSODEG00000009446	-	100	71.223	ENSPCOG00000020035	CMSS1	100	71.223	Propithecus_coquereli
ENSODEG00000009446	-	100	60.932	ENSPVAG00000017031	CMSS1	100	60.932	Pteropus_vampyrus
ENSODEG00000009446	-	90	42.105	ENSPNYG00000013428	cmss1	98	41.729	Pundamilia_nyererei
ENSODEG00000009446	-	100	40.136	ENSPNAG00000007912	cmss1	100	41.356	Pygocentrus_nattereri
ENSODEG00000009446	-	92	65.354	ENSRNOG00000027888	Cmss1	99	65.354	Rattus_norvegicus
ENSODEG00000009446	-	100	70.609	ENSRBIG00000037931	CMSS1	100	70.609	Rhinopithecus_bieti
ENSODEG00000009446	-	100	70.609	ENSRROG00000042910	CMSS1	100	70.609	Rhinopithecus_roxellana
ENSODEG00000009446	-	92	74.790	ENSSBOG00000030980	CMSS1	90	74.790	Saimiri_boliviensis_boliviensis
ENSODEG00000009446	-	97	60.956	ENSSHAG00000009321	CMSS1	99	60.956	Sarcophilus_harrisii
ENSODEG00000009446	-	100	43.051	ENSSFOG00015001509	cmss1	100	45.172	Scleropages_formosus
ENSODEG00000009446	-	100	45.361	ENSSMAG00000001653	cmss1	100	45.704	Scophthalmus_maximus
ENSODEG00000009446	-	100	44.444	ENSSDUG00000007719	cmss1	100	45.517	Seriola_dumerili
ENSODEG00000009446	-	80	54.589	ENSSLDG00000012300	cmss1	68	54.455	Seriola_lalandi_dorsalis
ENSODEG00000009446	-	100	57.143	ENSSARG00000003584	CMSS1	100	57.143	Sorex_araneus
ENSODEG00000009446	-	85	60.274	ENSSPUG00000003865	CMSS1	97	60.274	Sphenodon_punctatus
ENSODEG00000009446	-	80	55.825	ENSSPAG00000019182	cmss1	63	55.446	Stegastes_partitus
ENSODEG00000009446	-	100	71.326	ENSSSCG00000011970	CMSS1	100	71.326	Sus_scrofa
ENSODEG00000009446	-	85	54.587	ENSTGUG00000013635	CMSS1	95	54.587	Taeniopygia_guttata
ENSODEG00000009446	-	100	43.662	ENSTRUG00000015265	cmss1	100	44.366	Takifugu_rubripes
ENSODEG00000009446	-	78	47.030	ENSTNIG00000002880	cmss1	95	41.603	Tetraodon_nigroviridis
ENSODEG00000009446	-	79	79.245	ENSTBEG00000016722	CMSS1	80	79.245	Tupaia_belangeri
ENSODEG00000009446	-	100	68.100	ENSTTRG00000001562	CMSS1	100	68.100	Tursiops_truncatus
ENSODEG00000009446	-	97	70.330	ENSUAMG00000024209	CMSS1	98	82.110	Ursus_americanus
ENSODEG00000009446	-	93	72.763	ENSUMAG00000001983	CMSS1	99	72.763	Ursus_maritimus
ENSODEG00000009446	-	100	55.914	ENSVPAG00000000263	CMSS1	57	80.625	Vicugna_pacos
ENSODEG00000009446	-	93	74.380	ENSVVUG00000021647	-	98	74.380	Vulpes_vulpes
ENSODEG00000009446	-	96	71.837	ENSVVUG00000007776	-	96	71.837	Vulpes_vulpes
ENSODEG00000009446	-	100	45.714	ENSXETG00000011858	cmss1	100	46.786	Xenopus_tropicalis
ENSODEG00000009446	-	81	55.288	ENSXCOG00000018724	cmss1	69	54.950	Xiphophorus_couchianus
ENSODEG00000009446	-	81	55.288	ENSXMAG00000011243	cmss1	76	54.950	Xiphophorus_maculatus