EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000009547 (Gene tree)
Gene ID: -
Gene Symbol: SF3B6
Alias: CGI-110|Ht006|P14|SAP14a|SF3B14a
Full Name: splicing factor 3b subunit 6
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 9517 bases
Position: chrJH651534.1:8464726-8474242
Accession: 30096
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000012894	RRM_1	PF00076.22	2.1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000013064	SF3B6-201	360	-	ENSODEP00000012894	119 (aa)	-	-

Gene Model

Click here to download ENSODEG00000009547's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000009547's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000009547	SF3B6	55	36.232	ENSODEG00000000626	-	70	36.232

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000009547	SF3B6	92	100.000	ENSG00000115128	SF3B6	87	100.000	Homo_sapiens
ENSODEG00000009547	SF3B6	92	98.165	ENSAPOG00000023788	sf3b6	87	98.165	Acanthochromis_polyacanthus
ENSODEG00000009547	SF3B6	92	100.000	ENSAMEG00000002786	SF3B6	87	100.000	Ailuropoda_melanoleuca
ENSODEG00000009547	SF3B6	92	98.165	ENSACIG00000012608	sf3b6	87	98.165	Amphilophus_citrinellus
ENSODEG00000009547	SF3B6	92	98.165	ENSAOCG00000013394	sf3b6	87	98.165	Amphiprion_ocellaris
ENSODEG00000009547	SF3B6	92	98.165	ENSAPEG00000015311	sf3b6	87	98.165	Amphiprion_percula
ENSODEG00000009547	SF3B6	92	98.165	ENSATEG00000016569	sf3b6	87	98.165	Anabas_testudineus
ENSODEG00000009547	SF3B6	92	100.000	ENSACAG00000011677	SF3B6	87	100.000	Anolis_carolinensis
ENSODEG00000009547	SF3B6	92	100.000	ENSANAG00000027284	SF3B6	83	100.000	Aotus_nancymaae
ENSODEG00000009547	SF3B6	92	98.165	ENSACLG00000007793	sf3b6	87	98.165	Astatotilapia_calliptera
ENSODEG00000009547	SF3B6	92	100.000	ENSAMXG00000034888	sf3b6	87	100.000	Astyanax_mexicanus
ENSODEG00000009547	SF3B6	92	98.165	ENSBTAG00000049128	-	87	98.165	Bos_taurus
ENSODEG00000009547	SF3B6	92	100.000	ENSBTAG00000003407	SF3B6	87	100.000	Bos_taurus
ENSODEG00000009547	SF3B6	100	67.500	WBGene00016808	C50D2.5	87	67.500	Caenorhabditis_elegans
ENSODEG00000009547	SF3B6	92	100.000	ENSCJAG00000007716	SF3B6	87	100.000	Callithrix_jacchus
ENSODEG00000009547	SF3B6	92	100.000	ENSCAFG00000003957	SF3B6	87	100.000	Canis_familiaris
ENSODEG00000009547	SF3B6	92	100.000	ENSCAFG00020025576	SF3B6	87	100.000	Canis_lupus_dingo
ENSODEG00000009547	SF3B6	92	100.000	ENSCHIG00000009902	SF3B6	87	100.000	Capra_hircus
ENSODEG00000009547	SF3B6	92	100.000	ENSTSYG00000013978	SF3B6	87	100.000	Carlito_syrichta
ENSODEG00000009547	SF3B6	92	100.000	ENSCAPG00000016302	SF3B6	89	100.000	Cavia_aperea
ENSODEG00000009547	SF3B6	92	100.000	ENSCPOG00000008016	SF3B6	89	100.000	Cavia_porcellus
ENSODEG00000009547	SF3B6	91	93.519	ENSCCAG00000018894	-	84	93.519	Cebus_capucinus
ENSODEG00000009547	SF3B6	92	100.000	ENSCCAG00000036653	SF3B6	87	100.000	Cebus_capucinus
ENSODEG00000009547	SF3B6	92	100.000	ENSCATG00000030936	SF3B6	87	100.000	Cercocebus_atys
ENSODEG00000009547	SF3B6	92	100.000	ENSCLAG00000014512	SF3B6	89	100.000	Chinchilla_lanigera
ENSODEG00000009547	SF3B6	92	100.000	ENSCSAG00000008390	SF3B6	87	100.000	Chlorocebus_sabaeus
ENSODEG00000009547	SF3B6	92	100.000	ENSCHOG00000000689	SF3B6	87	100.000	Choloepus_hoffmanni
ENSODEG00000009547	SF3B6	92	75.229	ENSCHOG00000013886	-	86	75.229	Choloepus_hoffmanni
ENSODEG00000009547	SF3B6	92	100.000	ENSCPBG00000020042	SF3B6	87	100.000	Chrysemys_picta_bellii
ENSODEG00000009547	SF3B6	90	79.439	ENSCING00000012689	-	84	79.439	Ciona_intestinalis
ENSODEG00000009547	SF3B6	92	100.000	ENSCANG00000030559	SF3B6	87	100.000	Colobus_angolensis_palliatus
ENSODEG00000009547	SF3B6	92	100.000	ENSCGRG00001014595	Sf3b6	92	100.000	Cricetulus_griseus_chok1gshd
ENSODEG00000009547	SF3B6	92	100.000	ENSCGRG00000005272	Sf3b6	92	100.000	Cricetulus_griseus_crigri
ENSODEG00000009547	SF3B6	92	97.248	ENSCSEG00000019017	sf3b6	87	97.248	Cynoglossus_semilaevis
ENSODEG00000009547	SF3B6	92	99.083	ENSCVAG00000005055	sf3b6	87	99.083	Cyprinodon_variegatus
ENSODEG00000009547	SF3B6	92	100.000	ENSDARG00000009753	sf3b6	87	100.000	Danio_rerio
ENSODEG00000009547	SF3B6	92	100.000	ENSDNOG00000007148	SF3B6	87	100.000	Dasypus_novemcinctus
ENSODEG00000009547	SF3B6	92	100.000	ENSDORG00000009772	Sf3b6	87	100.000	Dipodomys_ordii
ENSODEG00000009547	SF3B6	92	81.982	ENSDORG00000029761	-	86	81.982	Dipodomys_ordii
ENSODEG00000009547	SF3B6	92	81.982	ENSDORG00000027390	-	86	81.982	Dipodomys_ordii
ENSODEG00000009547	SF3B6	88	77.143	FBgn0035692	Sf3b6	87	77.143	Drosophila_melanogaster
ENSODEG00000009547	SF3B6	89	94.340	ENSEBUG00000004424	sf3b6	83	94.340	Eptatretus_burgeri
ENSODEG00000009547	SF3B6	92	88.073	ENSEASG00005008061	-	87	88.073	Equus_asinus_asinus
ENSODEG00000009547	SF3B6	92	100.000	ENSEASG00005009993	SF3B6	87	100.000	Equus_asinus_asinus
ENSODEG00000009547	SF3B6	67	88.750	ENSECAG00000027755	-	68	88.750	Equus_caballus
ENSODEG00000009547	SF3B6	71	95.294	ENSECAG00000015618	SF3B6	78	95.294	Equus_caballus
ENSODEG00000009547	SF3B6	92	98.165	ENSELUG00000010379	sf3b6	87	98.165	Esox_lucius
ENSODEG00000009547	SF3B6	92	100.000	ENSFCAG00000031365	SF3B6	87	100.000	Felis_catus
ENSODEG00000009547	SF3B6	92	100.000	ENSFALG00000001651	SF3B6	87	100.000	Ficedula_albicollis
ENSODEG00000009547	SF3B6	92	100.000	ENSFDAG00000007864	SF3B6	87	100.000	Fukomys_damarensis
ENSODEG00000009547	SF3B6	92	99.083	ENSFHEG00000000685	sf3b6	87	99.083	Fundulus_heteroclitus
ENSODEG00000009547	SF3B6	92	97.248	ENSGMOG00000005123	sf3b6	87	97.248	Gadus_morhua
ENSODEG00000009547	SF3B6	76	100.000	ENSGALG00000016501	SF3B6	100	100.000	Gallus_gallus
ENSODEG00000009547	SF3B6	92	98.165	ENSGAFG00000009334	sf3b6	87	98.165	Gambusia_affinis
ENSODEG00000009547	SF3B6	92	97.248	ENSGACG00000004803	sf3b6	87	97.248	Gasterosteus_aculeatus
ENSODEG00000009547	SF3B6	92	100.000	ENSGAGG00000012240	SF3B6	87	100.000	Gopherus_agassizii
ENSODEG00000009547	SF3B6	92	100.000	ENSGGOG00000040806	SF3B6	87	100.000	Gorilla_gorilla
ENSODEG00000009547	SF3B6	92	98.165	ENSHBUG00000012556	sf3b6	87	98.165	Haplochromis_burtoni
ENSODEG00000009547	SF3B6	92	100.000	ENSHGLG00000014895	SF3B14	99	90.323	Heterocephalus_glaber_female
ENSODEG00000009547	SF3B6	92	100.000	ENSHGLG00100008639	SF3B14	99	90.323	Heterocephalus_glaber_male
ENSODEG00000009547	SF3B6	92	99.083	ENSHCOG00000019962	sf3b6	87	99.083	Hippocampus_comes
ENSODEG00000009547	SF3B6	92	100.000	ENSIPUG00000023800	sf3b6	87	100.000	Ictalurus_punctatus
ENSODEG00000009547	SF3B6	92	100.000	ENSJJAG00000021819	Sf3b6	87	100.000	Jaculus_jaculus
ENSODEG00000009547	SF3B6	92	98.165	ENSKMAG00000004000	sf3b6	87	98.165	Kryptolebias_marmoratus
ENSODEG00000009547	SF3B6	92	98.165	ENSLBEG00000022937	sf3b6	87	98.165	Labrus_bergylta
ENSODEG00000009547	SF3B6	92	100.000	ENSLACG00000014326	SF3B6	87	100.000	Latimeria_chalumnae
ENSODEG00000009547	SF3B6	92	100.000	ENSLOCG00000016481	sf3b6	87	100.000	Lepisosteus_oculatus
ENSODEG00000009547	SF3B6	92	100.000	ENSLAFG00000029423	SF3B6	87	100.000	Loxodonta_africana
ENSODEG00000009547	SF3B6	92	100.000	ENSMFAG00000038178	SF3B6	87	100.000	Macaca_fascicularis
ENSODEG00000009547	SF3B6	92	100.000	ENSMMUG00000001282	SF3B6	87	100.000	Macaca_mulatta
ENSODEG00000009547	SF3B6	92	100.000	ENSMNEG00000029050	SF3B6	87	100.000	Macaca_nemestrina
ENSODEG00000009547	SF3B6	92	100.000	ENSMLEG00000019896	SF3B6	87	100.000	Mandrillus_leucophaeus
ENSODEG00000009547	SF3B6	68	96.296	ENSMAMG00000007713	sf3b6	74	96.296	Mastacembelus_armatus
ENSODEG00000009547	SF3B6	92	98.165	ENSMZEG00005003557	sf3b6	87	98.165	Maylandia_zebra
ENSODEG00000009547	SF3B6	92	100.000	ENSMGAG00000014057	SF3B6	87	100.000	Meleagris_gallopavo
ENSODEG00000009547	SF3B6	92	100.000	ENSMAUG00000000586	-	87	100.000	Mesocricetus_auratus
ENSODEG00000009547	SF3B6	92	100.000	ENSMICG00000032874	SF3B6	87	100.000	Microcebus_murinus
ENSODEG00000009547	SF3B6	92	100.000	ENSMOCG00000014338	Sf3b6	87	100.000	Microtus_ochrogaster
ENSODEG00000009547	SF3B6	92	99.083	ENSMMOG00000015653	sf3b6	87	99.083	Mola_mola
ENSODEG00000009547	SF3B6	92	91.743	ENSMODG00000002144	SF3B6	87	91.743	Monodelphis_domestica
ENSODEG00000009547	SF3B6	92	99.083	ENSMALG00000019642	sf3b6	59	99.083	Monopterus_albus
ENSODEG00000009547	SF3B6	92	100.000	MGP_CAROLIEiJ_G0017590	Sf3b6	87	100.000	Mus_caroli
ENSODEG00000009547	SF3B6	92	100.000	ENSMUSG00000037361	Sf3b6	95	97.222	Mus_musculus
ENSODEG00000009547	SF3B6	92	100.000	MGP_PahariEiJ_G0029348	Sf3b6	87	100.000	Mus_pahari
ENSODEG00000009547	SF3B6	92	100.000	MGP_SPRETEiJ_G0018434	Sf3b6	87	100.000	Mus_spretus
ENSODEG00000009547	SF3B6	92	100.000	ENSMPUG00000013957	SF3B6	87	100.000	Mustela_putorius_furo
ENSODEG00000009547	SF3B6	92	100.000	ENSMLUG00000002473	SF3B6	87	100.000	Myotis_lucifugus
ENSODEG00000009547	SF3B6	92	100.000	ENSNGAG00000020256	Sf3b6	87	100.000	Nannospalax_galili
ENSODEG00000009547	SF3B6	92	98.165	ENSNBRG00000018244	sf3b6	87	98.165	Neolamprologus_brichardi
ENSODEG00000009547	SF3B6	92	100.000	ENSNLEG00000000815	-	87	100.000	Nomascus_leucogenys
ENSODEG00000009547	SF3B6	92	98.165	ENSONIG00000001219	sf3b6	87	98.165	Oreochromis_niloticus
ENSODEG00000009547	SF3B6	92	100.000	ENSOANG00000007627	SF3B6	87	100.000	Ornithorhynchus_anatinus
ENSODEG00000009547	SF3B6	92	100.000	ENSOCUG00000022008	SF3B6	87	100.000	Oryctolagus_cuniculus
ENSODEG00000009547	SF3B6	92	98.165	ENSORLG00000015955	sf3b6	87	98.165	Oryzias_latipes
ENSODEG00000009547	SF3B6	92	98.165	ENSORLG00020005875	sf3b6	87	98.165	Oryzias_latipes_hni
ENSODEG00000009547	SF3B6	92	98.165	ENSORLG00015001347	sf3b6	87	98.165	Oryzias_latipes_hsok
ENSODEG00000009547	SF3B6	92	98.165	ENSOMEG00000014506	sf3b6	87	98.165	Oryzias_melastigma
ENSODEG00000009547	SF3B6	92	100.000	ENSOGAG00000004468	SF3B6	87	100.000	Otolemur_garnettii
ENSODEG00000009547	SF3B6	92	100.000	ENSOARG00000017819	SF3B6	87	100.000	Ovis_aries
ENSODEG00000009547	SF3B6	92	100.000	ENSPPAG00000027816	SF3B6	87	100.000	Pan_paniscus
ENSODEG00000009547	SF3B6	92	100.000	ENSPPRG00000023257	SF3B6	87	100.000	Panthera_pardus
ENSODEG00000009547	SF3B6	92	100.000	ENSPTIG00000013322	SF3B6	87	100.000	Panthera_tigris_altaica
ENSODEG00000009547	SF3B6	92	100.000	ENSPTRG00000011709	SF3B6	87	100.000	Pan_troglodytes
ENSODEG00000009547	SF3B6	92	100.000	ENSPANG00000021963	SF3B6	87	100.000	Papio_anubis
ENSODEG00000009547	SF3B6	92	100.000	ENSPKIG00000012311	sf3b6	87	100.000	Paramormyrops_kingsleyae
ENSODEG00000009547	SF3B6	92	100.000	ENSPSIG00000017115	SF3B6	95	100.000	Pelodiscus_sinensis
ENSODEG00000009547	SF3B6	68	96.296	ENSPMGG00000014621	sf3b6	68	96.296	Periophthalmus_magnuspinnatus
ENSODEG00000009547	SF3B6	92	100.000	ENSPEMG00000010308	Sf3b6	91	100.000	Peromyscus_maniculatus_bairdii
ENSODEG00000009547	SF3B6	92	89.908	ENSPMAG00000006008	sf3b6	87	89.908	Petromyzon_marinus
ENSODEG00000009547	SF3B6	92	100.000	ENSPCIG00000022128	-	87	100.000	Phascolarctos_cinereus
ENSODEG00000009547	SF3B6	91	75.926	ENSPCIG00000015858	-	86	75.926	Phascolarctos_cinereus
ENSODEG00000009547	SF3B6	92	98.165	ENSPFOG00000012494	sf3b6	87	98.165	Poecilia_formosa
ENSODEG00000009547	SF3B6	92	98.165	ENSPLAG00000020460	sf3b6	87	98.165	Poecilia_latipinna
ENSODEG00000009547	SF3B6	92	98.165	ENSPMEG00000004426	sf3b6	87	98.165	Poecilia_mexicana
ENSODEG00000009547	SF3B6	92	100.000	ENSPPYG00000012603	SF3B6	87	100.000	Pongo_abelii
ENSODEG00000009547	SF3B6	92	100.000	ENSPVAG00000011346	SF3B6	87	100.000	Pteropus_vampyrus
ENSODEG00000009547	SF3B6	92	98.165	ENSPNYG00000021832	sf3b6	87	98.165	Pundamilia_nyererei
ENSODEG00000009547	SF3B6	92	100.000	ENSPNAG00000008845	sf3b6	87	100.000	Pygocentrus_nattereri
ENSODEG00000009547	SF3B6	92	82.569	ENSRNOG00000046172	Sf3b6	87	82.569	Rattus_norvegicus
ENSODEG00000009547	SF3B6	92	100.000	ENSRBIG00000039598	SF3B6	91	100.000	Rhinopithecus_bieti
ENSODEG00000009547	SF3B6	92	100.000	ENSRROG00000011368	SF3B6	87	100.000	Rhinopithecus_roxellana
ENSODEG00000009547	SF3B6	92	100.000	ENSSBOG00000002914	SF3B6	87	100.000	Saimiri_boliviensis_boliviensis
ENSODEG00000009547	SF3B6	92	100.000	ENSSFOG00015014370	sf3b6	87	100.000	Scleropages_formosus
ENSODEG00000009547	SF3B6	92	98.165	ENSSMAG00000004566	sf3b6	87	98.165	Scophthalmus_maximus
ENSODEG00000009547	SF3B6	92	98.165	ENSSDUG00000006538	sf3b6	87	98.165	Seriola_dumerili
ENSODEG00000009547	SF3B6	92	98.165	ENSSLDG00000004494	sf3b6	87	98.165	Seriola_lalandi_dorsalis
ENSODEG00000009547	SF3B6	92	100.000	ENSSARG00000011902	-	87	100.000	Sorex_araneus
ENSODEG00000009547	SF3B6	92	100.000	ENSSPUG00000014919	SF3B6	87	100.000	Sphenodon_punctatus
ENSODEG00000009547	SF3B6	92	98.165	ENSSPAG00000013201	sf3b6	87	98.165	Stegastes_partitus
ENSODEG00000009547	SF3B6	92	100.000	ENSSSCG00000008587	SF3B6	87	100.000	Sus_scrofa
ENSODEG00000009547	SF3B6	92	100.000	ENSTGUG00000013191	SF3B6	87	100.000	Taeniopygia_guttata
ENSODEG00000009547	SF3B6	92	98.165	ENSTRUG00000025286	sf3b6	87	98.165	Takifugu_rubripes
ENSODEG00000009547	SF3B6	92	98.165	ENSTNIG00000009719	sf3b6	87	98.165	Tetraodon_nigroviridis
ENSODEG00000009547	SF3B6	92	100.000	ENSTBEG00000012532	SF3B6	95	100.000	Tupaia_belangeri
ENSODEG00000009547	SF3B6	92	100.000	ENSTTRG00000013430	SF3B6	95	100.000	Tursiops_truncatus
ENSODEG00000009547	SF3B6	92	100.000	ENSUAMG00000025329	SF3B6	87	100.000	Ursus_americanus
ENSODEG00000009547	SF3B6	92	82.727	ENSUAMG00000000978	-	87	82.727	Ursus_americanus
ENSODEG00000009547	SF3B6	92	100.000	ENSUMAG00000022835	SF3B6	87	100.000	Ursus_maritimus
ENSODEG00000009547	SF3B6	92	100.000	ENSVPAG00000005546	SF3B6	95	100.000	Vicugna_pacos
ENSODEG00000009547	SF3B6	92	100.000	ENSVVUG00000010874	SF3B6	87	100.000	Vulpes_vulpes
ENSODEG00000009547	SF3B6	92	99.083	ENSXETG00000018204	sf3b6	87	99.083	Xenopus_tropicalis
ENSODEG00000009547	SF3B6	76	83.505	ENSXCOG00000008477	sf3b6	75	83.505	Xiphophorus_couchianus
ENSODEG00000009547	SF3B6	92	98.165	ENSXMAG00000010747	sf3b6	87	98.165	Xiphophorus_maculatus