EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000009632 (Gene tree)
Gene ID: 101560488
Gene Symbol: -
Alias: -
Full Name: DEAD-box helicase 55
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 13905 bases
Position: chrJH651591.1:5808503-5822407
Accession: 101560488
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000013003	ResIII	PF04851.15	3.2e-06	1	1
ENSODEP00000013004	ResIII	PF04851.15	3.2e-06	1	1
ENSODEP00000013003	DEAD	PF00270.29	1.5e-41	1	1
ENSODEP00000013004	DEAD	PF00270.29	1.5e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000013174	-	1785	-	ENSODEP00000013003	594 (aa)	-	-
ENSODET00000013175	-	1830	XM_004635871	ENSODEP00000013004	598 (aa)	XP_004635928	UPI00033367BE

Gene Model

Click here to download ENSODEG00000009632's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000009632's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000009632	-	68	33.577	ENSODEG00000008505	DDX41	55	35.635
ENSODEG00000009632	-	58	32.464	ENSODEG00000007950	DDX6	67	32.464
ENSODEG00000009632	-	61	32.796	ENSODEG00000003839	-	54	32.796
ENSODEG00000009632	-	61	33.065	ENSODEG00000016951	-	52	33.065
ENSODEG00000009632	-	59	31.405	ENSODEG00000011203	DDX49	70	31.405
ENSODEG00000009632	-	60	32.778	ENSODEG00000009771	DDX59	55	32.778
ENSODEG00000009632	-	57	34.807	ENSODEG00000001355	-	52	34.807
ENSODEG00000009632	-	80	35.685	ENSODEG00000007330	DDX18	68	35.685
ENSODEG00000009632	-	60	31.025	ENSODEG00000016207	-	63	31.025
ENSODEG00000009632	-	51	32.595	ENSODEG00000002236	-	69	32.595
ENSODEG00000009632	-	94	80.714	ENSODEG00000016592	-	100	81.250
ENSODEG00000009632	-	58	35.920	ENSODEG00000012890	DDX47	71	35.920
ENSODEG00000009632	-	59	30.194	ENSODEG00000017512	-	86	30.933
ENSODEG00000009632	-	66	30.769	ENSODEG00000010300	EIF4A3	82	31.476

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000009632	-	100	89.000	ENSG00000111364	DDX55	100	89.000	Homo_sapiens
ENSODEG00000009632	-	99	72.758	ENSAPOG00000013126	ddx55	99	72.758	Acanthochromis_polyacanthus
ENSODEG00000009632	-	100	86.167	ENSAMEG00000015274	DDX55	100	86.167	Ailuropoda_melanoleuca
ENSODEG00000009632	-	97	73.057	ENSACIG00000007580	ddx55	98	73.057	Amphilophus_citrinellus
ENSODEG00000009632	-	100	71.786	ENSAOCG00000012037	ddx55	94	71.786	Amphiprion_ocellaris
ENSODEG00000009632	-	100	71.953	ENSAPEG00000011003	ddx55	94	71.953	Amphiprion_percula
ENSODEG00000009632	-	100	70.875	ENSATEG00000004029	ddx55	99	70.875	Anabas_testudineus
ENSODEG00000009632	-	94	76.471	ENSAPLG00000015032	DDX55	99	76.386	Anas_platyrhynchos
ENSODEG00000009632	-	99	80.475	ENSACAG00000015296	DDX55	98	80.475	Anolis_carolinensis
ENSODEG00000009632	-	93	84.726	ENSANAG00000034064	DDX55	99	83.989	Aotus_nancymaae
ENSODEG00000009632	-	99	71.791	ENSACLG00000024691	ddx55	100	71.791	Astatotilapia_calliptera
ENSODEG00000009632	-	99	67.388	ENSAMXG00000019947	ddx55	99	67.388	Astyanax_mexicanus
ENSODEG00000009632	-	100	88.235	ENSBTAG00000007266	DDX55	100	83.527	Bos_taurus
ENSODEG00000009632	-	95	37.819	WBGene00013983	ZK512.2	98	38.327	Caenorhabditis_elegans
ENSODEG00000009632	-	99	88.475	ENSCJAG00000020471	-	99	87.980	Callithrix_jacchus
ENSODEG00000009632	-	100	85.167	ENSCAFG00000007452	DDX55	100	85.167	Canis_familiaris
ENSODEG00000009632	-	91	87.269	ENSCAFG00020015254	DDX55	97	87.269	Canis_lupus_dingo
ENSODEG00000009632	-	100	88.403	ENSCHIG00000020402	DDX55	100	88.186	Capra_hircus
ENSODEG00000009632	-	100	88.167	ENSTSYG00000007427	DDX55	100	88.167	Carlito_syrichta
ENSODEG00000009632	-	98	87.629	ENSCAPG00000005124	DDX55	98	89.474	Cavia_aperea
ENSODEG00000009632	-	100	90.236	ENSCPOG00000010015	DDX55	100	90.167	Cavia_porcellus
ENSODEG00000009632	-	99	88.644	ENSCCAG00000021652	DDX55	99	88.147	Cebus_capucinus
ENSODEG00000009632	-	100	84.729	ENSCATG00000034315	DDX55	100	84.729	Cercocebus_atys
ENSODEG00000009632	-	100	93.167	ENSCLAG00000011203	DDX55	100	93.167	Chinchilla_lanigera
ENSODEG00000009632	-	100	89.000	ENSCSAG00000002057	DDX55	100	89.000	Chlorocebus_sabaeus
ENSODEG00000009632	-	57	96.875	ENSCHOG00000006189	-	60	96.875	Choloepus_hoffmanni
ENSODEG00000009632	-	88	85.441	ENSCPBG00000025960	DDX55	99	84.899	Chrysemys_picta_bellii
ENSODEG00000009632	-	97	53.041	ENSCING00000009622	-	98	53.041	Ciona_intestinalis
ENSODEG00000009632	-	96	52.479	ENSCSAVG00000003375	-	98	52.355	Ciona_savignyi
ENSODEG00000009632	-	100	88.833	ENSCANG00000000156	DDX55	100	88.833	Colobus_angolensis_palliatus
ENSODEG00000009632	-	98	87.479	ENSCGRG00001001652	Ddx55	99	86.050	Cricetulus_griseus_chok1gshd
ENSODEG00000009632	-	98	87.307	ENSCGRG00000014742	Ddx55	99	85.882	Cricetulus_griseus_crigri
ENSODEG00000009632	-	99	71.044	ENSCSEG00000012161	ddx55	99	71.912	Cynoglossus_semilaevis
ENSODEG00000009632	-	99	71.791	ENSCVAG00000006635	ddx55	99	71.791	Cyprinodon_variegatus
ENSODEG00000009632	-	99	73.693	ENSDARG00000009864	ddx55	99	73.693	Danio_rerio
ENSODEG00000009632	-	100	87.854	ENSDNOG00000005167	DDX55	99	87.854	Dasypus_novemcinctus
ENSODEG00000009632	-	96	46.972	FBgn0037561	CG9630	98	47.195	Drosophila_melanogaster
ENSODEG00000009632	-	93	73.188	ENSETEG00000001826	DDX55	98	73.188	Echinops_telfairi
ENSODEG00000009632	-	96	63.884	ENSEBUG00000007071	ddx55	98	64.065	Eptatretus_burgeri
ENSODEG00000009632	-	100	88.481	ENSEASG00005012650	DDX55	100	88.481	Equus_asinus_asinus
ENSODEG00000009632	-	91	90.406	ENSECAG00000011237	DDX55	87	90.406	Equus_caballus
ENSODEG00000009632	-	99	75.680	ENSEEUG00000006313	DDX55	98	75.680	Erinaceus_europaeus
ENSODEG00000009632	-	99	72.651	ENSELUG00000002616	ddx55	99	72.651	Esox_lucius
ENSODEG00000009632	-	100	87.667	ENSFCAG00000003770	DDX55	100	87.667	Felis_catus
ENSODEG00000009632	-	100	81.145	ENSFALG00000009300	DDX55	99	81.525	Ficedula_albicollis
ENSODEG00000009632	-	99	91.017	ENSFDAG00000004680	DDX55	99	90.756	Fukomys_damarensis
ENSODEG00000009632	-	97	71.799	ENSFHEG00000007912	ddx55	98	71.799	Fundulus_heteroclitus
ENSODEG00000009632	-	97	69.257	ENSGMOG00000017762	ddx55	96	69.603	Gadus_morhua
ENSODEG00000009632	-	99	81.154	ENSGALG00000003298	DDX55	99	81.154	Gallus_gallus
ENSODEG00000009632	-	98	72.184	ENSGAFG00000004388	ddx55	99	72.184	Gambusia_affinis
ENSODEG00000009632	-	97	73.057	ENSGACG00000015591	ddx55	94	73.057	Gasterosteus_aculeatus
ENSODEG00000009632	-	91	85.609	ENSGAGG00000014403	DDX55	99	85.609	Gopherus_agassizii
ENSODEG00000009632	-	100	88.833	ENSGGOG00000026102	DDX55	100	88.833	Gorilla_gorilla
ENSODEG00000009632	-	99	71.791	ENSHBUG00000011523	ddx55	100	71.791	Haplochromis_burtoni
ENSODEG00000009632	-	100	90.500	ENSHGLG00000019202	DDX55	100	90.500	Heterocephalus_glaber_female
ENSODEG00000009632	-	100	90.500	ENSHGLG00100019440	DDX55	100	90.500	Heterocephalus_glaber_male
ENSODEG00000009632	-	97	64.494	ENSHCOG00000004710	ddx55	99	64.494	Hippocampus_comes
ENSODEG00000009632	-	99	70.569	ENSIPUG00000014551	ddx55	98	70.569	Ictalurus_punctatus
ENSODEG00000009632	-	100	87.879	ENSSTOG00000006121	DDX55	100	87.333	Ictidomys_tridecemlineatus
ENSODEG00000009632	-	100	87.000	ENSJJAG00000013401	Ddx55	100	87.000	Jaculus_jaculus
ENSODEG00000009632	-	99	70.897	ENSKMAG00000022006	ddx55	100	70.897	Kryptolebias_marmoratus
ENSODEG00000009632	-	97	72.522	ENSLBEG00000021815	ddx55	96	72.522	Labrus_bergylta
ENSODEG00000009632	-	99	77.759	ENSLACG00000017050	DDX55	99	77.572	Latimeria_chalumnae
ENSODEG00000009632	-	100	73.367	ENSLOCG00000005828	ddx55	99	73.367	Lepisosteus_oculatus
ENSODEG00000009632	-	99	89.966	ENSLAFG00000007293	DDX55	100	89.149	Loxodonta_africana
ENSODEG00000009632	-	100	88.833	ENSMFAG00000038165	DDX55	100	88.833	Macaca_fascicularis
ENSODEG00000009632	-	100	88.833	ENSMMUG00000013178	DDX55	100	88.833	Macaca_mulatta
ENSODEG00000009632	-	100	88.833	ENSMNEG00000028630	DDX55	100	88.833	Macaca_nemestrina
ENSODEG00000009632	-	99	89.661	ENSMLEG00000039187	DDX55	99	89.149	Mandrillus_leucophaeus
ENSODEG00000009632	-	99	72.575	ENSMAMG00000011297	ddx55	99	72.575	Mastacembelus_armatus
ENSODEG00000009632	-	99	71.791	ENSMZEG00005008047	ddx55	100	71.791	Maylandia_zebra
ENSODEG00000009632	-	100	77.778	ENSMGAG00000003185	DDX55	99	77.929	Meleagris_gallopavo
ENSODEG00000009632	-	98	88.165	ENSMAUG00000020054	Ddx55	99	86.723	Mesocricetus_auratus
ENSODEG00000009632	-	98	82.705	ENSMICG00000006477	DDX55	99	81.667	Microcebus_murinus
ENSODEG00000009632	-	99	87.884	ENSMOCG00000021289	Ddx55	99	86.891	Microtus_ochrogaster
ENSODEG00000009632	-	97	72.712	ENSMMOG00000009411	ddx55	96	72.712	Mola_mola
ENSODEG00000009632	-	92	86.496	ENSMODG00000012519	DDX55	95	86.496	Monodelphis_domestica
ENSODEG00000009632	-	98	71.184	ENSMALG00000018543	ddx55	97	71.184	Monopterus_albus
ENSODEG00000009632	-	75	89.438	MGP_CAROLIEiJ_G0027755	-	99	89.438	Mus_caroli
ENSODEG00000009632	-	99	86.949	ENSMUSG00000029389	Ddx55	99	86.555	Mus_musculus
ENSODEG00000009632	-	99	84.471	MGP_PahariEiJ_G0024335	Ddx55	98	84.471	Mus_pahari
ENSODEG00000009632	-	99	86.949	MGP_SPRETEiJ_G0028753	Ddx55	99	86.555	Mus_spretus
ENSODEG00000009632	-	100	83.860	ENSMPUG00000001505	DDX55	100	83.860	Mustela_putorius_furo
ENSODEG00000009632	-	88	75.335	ENSMLUG00000025148	-	100	74.770	Myotis_lucifugus
ENSODEG00000009632	-	99	79.287	ENSMLUG00000001265	-	99	77.983	Myotis_lucifugus
ENSODEG00000009632	-	99	88.396	ENSNGAG00000020564	Ddx55	100	87.333	Nannospalax_galili
ENSODEG00000009632	-	99	71.791	ENSNBRG00000018748	ddx55	100	71.791	Neolamprologus_brichardi
ENSODEG00000009632	-	99	89.661	ENSNLEG00000001658	DDX55	100	89.149	Nomascus_leucogenys
ENSODEG00000009632	-	98	81.818	ENSMEUG00000013689	DDX55	99	80.672	Notamacropus_eugenii
ENSODEG00000009632	-	100	85.522	ENSOPRG00000000850	DDX55	100	85.000	Ochotona_princeps
ENSODEG00000009632	-	99	71.791	ENSONIG00000015311	ddx55	98	71.791	Oreochromis_niloticus
ENSODEG00000009632	-	92	86.157	ENSOANG00000015332	DDX55	99	85.152	Ornithorhynchus_anatinus
ENSODEG00000009632	-	100	86.667	ENSOCUG00000003456	DDX55	100	86.667	Oryctolagus_cuniculus
ENSODEG00000009632	-	97	73.057	ENSORLG00000029482	ddx55	98	73.057	Oryzias_latipes
ENSODEG00000009632	-	97	72.539	ENSORLG00015004885	ddx55	98	73.211	Oryzias_latipes_hsok
ENSODEG00000009632	-	99	73.220	ENSOMEG00000023619	ddx55	99	73.220	Oryzias_melastigma
ENSODEG00000009632	-	99	87.288	ENSOGAG00000009195	DDX55	99	86.644	Otolemur_garnettii
ENSODEG00000009632	-	100	88.739	ENSOARG00000003364	DDX55	100	88.519	Ovis_aries
ENSODEG00000009632	-	100	88.667	ENSPPAG00000005988	DDX55	100	88.667	Pan_paniscus
ENSODEG00000009632	-	100	88.000	ENSPPRG00000012157	DDX55	100	88.000	Panthera_pardus
ENSODEG00000009632	-	94	88.121	ENSPTIG00000011490	DDX55	94	88.121	Panthera_tigris_altaica
ENSODEG00000009632	-	100	88.667	ENSPTRG00000005601	DDX55	100	88.667	Pan_troglodytes
ENSODEG00000009632	-	100	89.167	ENSPANG00000007905	DDX55	100	89.167	Papio_anubis
ENSODEG00000009632	-	97	75.862	ENSPKIG00000023661	ddx55	99	75.862	Paramormyrops_kingsleyae
ENSODEG00000009632	-	94	81.915	ENSPSIG00000012901	DDX55	100	82.609	Pelodiscus_sinensis
ENSODEG00000009632	-	91	70.111	ENSPMGG00000017224	ddx55	100	70.111	Periophthalmus_magnuspinnatus
ENSODEG00000009632	-	99	87.966	ENSPEMG00000018052	Ddx55	99	87.563	Peromyscus_maniculatus_bairdii
ENSODEG00000009632	-	87	64.672	ENSPMAG00000007486	ddx55	99	65.058	Petromyzon_marinus
ENSODEG00000009632	-	91	87.269	ENSPCIG00000010973	DDX55	98	87.269	Phascolarctos_cinereus
ENSODEG00000009632	-	98	72.279	ENSPFOG00000006970	ddx55	91	72.279	Poecilia_formosa
ENSODEG00000009632	-	98	72.355	ENSPLAG00000014735	ddx55	99	72.355	Poecilia_latipinna
ENSODEG00000009632	-	98	72.355	ENSPMEG00000020635	ddx55	99	72.355	Poecilia_mexicana
ENSODEG00000009632	-	98	71.624	ENSPREG00000016644	ddx55	99	71.624	Poecilia_reticulata
ENSODEG00000009632	-	100	87.167	ENSPPYG00000005091	DDX55	100	87.167	Pongo_abelii
ENSODEG00000009632	-	99	86.565	ENSPCAG00000014127	DDX55	99	85.810	Procavia_capensis
ENSODEG00000009632	-	99	90.000	ENSPCOG00000011189	DDX55	99	89.482	Propithecus_coquereli
ENSODEG00000009632	-	100	85.977	ENSPVAG00000015321	DDX55	100	85.977	Pteropus_vampyrus
ENSODEG00000009632	-	99	71.622	ENSPNYG00000003669	ddx55	100	71.622	Pundamilia_nyererei
ENSODEG00000009632	-	99	73.154	ENSPNAG00000012855	ddx55	99	73.154	Pygocentrus_nattereri
ENSODEG00000009632	-	99	87.310	ENSRNOG00000001043	Ddx55	99	87.310	Rattus_norvegicus
ENSODEG00000009632	-	100	88.833	ENSRBIG00000044699	DDX55	100	88.833	Rhinopithecus_bieti
ENSODEG00000009632	-	100	89.000	ENSRROG00000024824	DDX55	100	89.000	Rhinopithecus_roxellana
ENSODEG00000009632	-	98	37.152	YFL002C	-	99	37.198	Saccharomyces_cerevisiae
ENSODEG00000009632	-	99	88.305	ENSSBOG00000024833	DDX55	99	87.813	Saimiri_boliviensis_boliviensis
ENSODEG00000009632	-	94	85.258	ENSSHAG00000015820	DDX55	99	85.258	Sarcophilus_harrisii
ENSODEG00000009632	-	99	73.746	ENSSFOG00015017496	ddx55	98	73.746	Scleropages_formosus
ENSODEG00000009632	-	99	71.880	ENSSMAG00000010441	ddx55	99	71.880	Scophthalmus_maximus
ENSODEG00000009632	-	100	71.933	ENSSDUG00000023568	ddx55	99	71.933	Seriola_dumerili
ENSODEG00000009632	-	99	66.946	ENSSLDG00000011299	ddx55	99	66.946	Seriola_lalandi_dorsalis
ENSODEG00000009632	-	91	85.714	ENSSARG00000003842	DDX55	98	85.192	Sorex_araneus
ENSODEG00000009632	-	99	81.834	ENSSPUG00000012798	DDX55	99	81.834	Sphenodon_punctatus
ENSODEG00000009632	-	99	72.941	ENSSPAG00000011806	ddx55	99	72.941	Stegastes_partitus
ENSODEG00000009632	-	91	90.406	ENSSSCG00000009771	DDX55	98	90.406	Sus_scrofa
ENSODEG00000009632	-	97	81.865	ENSTGUG00000005302	-	99	81.017	Taeniopygia_guttata
ENSODEG00000009632	-	99	70.017	ENSTRUG00000018525	ddx55	99	70.017	Takifugu_rubripes
ENSODEG00000009632	-	97	70.537	ENSTNIG00000013515	DDX55	96	70.537	Tetraodon_nigroviridis
ENSODEG00000009632	-	75	81.532	ENSTBEG00000010822	DDX55	100	81.532	Tupaia_belangeri
ENSODEG00000009632	-	100	88.333	ENSTTRG00000007251	DDX55	100	88.333	Tursiops_truncatus
ENSODEG00000009632	-	100	86.167	ENSUAMG00000012589	DDX55	100	86.167	Ursus_americanus
ENSODEG00000009632	-	93	86.176	ENSUMAG00000003869	DDX55	100	86.176	Ursus_maritimus
ENSODEG00000009632	-	93	81.655	ENSVPAG00000007028	DDX55	99	81.655	Vicugna_pacos
ENSODEG00000009632	-	100	85.167	ENSVVUG00000027506	DDX55	98	87.392	Vulpes_vulpes
ENSODEG00000009632	-	100	75.758	ENSXETG00000005825	ddx55	99	75.758	Xenopus_tropicalis
ENSODEG00000009632	-	98	72.355	ENSXCOG00000010120	ddx55	99	72.355	Xiphophorus_couchianus
ENSODEG00000009632	-	98	72.526	ENSXMAG00000011731	ddx55	99	72.526	Xiphophorus_maculatus