EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000009779 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 836 bases
Position: chrJH651531.1:14485475-14486310
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000013209	zf-CCHC	PF00098.23	1.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000013385	-	678	-	ENSODEP00000013209	225 (aa)	-	-

Gene Model

Click here to download ENSODEG00000009779's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000009779's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000009779	-	100	75.092	ENSODEG00000011181	-	100	75.092
ENSODEG00000009779	-	98	62.257	ENSODEG00000018283	-	91	62.257

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000009779	-	100	74.359	ENSG00000160917	CPSF4	100	75.000	Homo_sapiens
ENSODEG00000009779	-	71	65.363	ENSAPOG00000004921	cpsf4	100	65.363	Acanthochromis_polyacanthus
ENSODEG00000009779	-	100	75.092	ENSAMEG00000006252	CPSF4	100	75.092	Ailuropoda_melanoleuca
ENSODEG00000009779	-	100	67.984	ENSACIG00000009248	cpsf4	100	68.127	Amphilophus_citrinellus
ENSODEG00000009779	-	100	65.799	ENSAOCG00000019616	cpsf4	100	65.799	Amphiprion_ocellaris
ENSODEG00000009779	-	100	65.799	ENSAPEG00000011679	cpsf4	100	65.799	Amphiprion_percula
ENSODEG00000009779	-	100	67.451	ENSATEG00000007010	cpsf4	100	67.451	Anabas_testudineus
ENSODEG00000009779	-	100	70.696	ENSACAG00000012941	CPSF4	89	70.696	Anolis_carolinensis
ENSODEG00000009779	-	100	74.359	ENSANAG00000021360	CPSF4	100	74.359	Aotus_nancymaae
ENSODEG00000009779	-	100	64.945	ENSACLG00000010374	cpsf4	100	64.945	Astatotilapia_calliptera
ENSODEG00000009779	-	100	65.818	ENSAMXG00000031647	cpsf4	100	66.545	Astyanax_mexicanus
ENSODEG00000009779	-	100	72.797	ENSBTAG00000002090	CPSF4	100	72.797	Bos_taurus
ENSODEG00000009779	-	100	74.359	ENSCJAG00000015826	CPSF4	100	74.359	Callithrix_jacchus
ENSODEG00000009779	-	100	74.725	ENSCAFG00000015036	CPSF4	100	74.725	Canis_familiaris
ENSODEG00000009779	-	100	69.597	ENSCAFG00020014462	CPSF4	100	69.597	Canis_lupus_dingo
ENSODEG00000009779	-	100	74.725	ENSCHIG00000014313	CPSF4	100	74.725	Capra_hircus
ENSODEG00000009779	-	100	66.031	ENSTSYG00000014604	-	100	66.031	Carlito_syrichta
ENSODEG00000009779	-	89	67.811	ENSTSYG00000008195	-	98	68.050	Carlito_syrichta
ENSODEG00000009779	-	100	72.797	ENSTSYG00000005712	-	100	72.797	Carlito_syrichta
ENSODEG00000009779	-	78	74.312	ENSCAPG00000013881	CPSF4	87	74.312	Cavia_aperea
ENSODEG00000009779	-	100	73.563	ENSCPOG00000001783	CPSF4	100	73.563	Cavia_porcellus
ENSODEG00000009779	-	100	74.359	ENSCCAG00000028291	CPSF4	100	74.359	Cebus_capucinus
ENSODEG00000009779	-	100	74.359	ENSCATG00000038440	CPSF4	100	74.359	Cercocebus_atys
ENSODEG00000009779	-	100	74.725	ENSCLAG00000007050	CPSF4	100	74.725	Chinchilla_lanigera
ENSODEG00000009779	-	100	74.359	ENSCSAG00000017795	CPSF4	100	74.359	Chlorocebus_sabaeus
ENSODEG00000009779	-	77	70.833	ENSCPBG00000020869	CPSF4	100	70.833	Chrysemys_picta_bellii
ENSODEG00000009779	-	64	61.176	ENSCPBG00000010269	-	100	61.176	Chrysemys_picta_bellii
ENSODEG00000009779	-	96	43.798	ENSCING00000021080	-	97	44.574	Ciona_intestinalis
ENSODEG00000009779	-	96	41.463	ENSCSAVG00000011469	-	97	41.463	Ciona_savignyi
ENSODEG00000009779	-	100	74.359	ENSCANG00000019384	CPSF4	100	74.359	Colobus_angolensis_palliatus
ENSODEG00000009779	-	100	73.563	ENSCGRG00001024184	Cpsf4	100	73.563	Cricetulus_griseus_chok1gshd
ENSODEG00000009779	-	100	75.092	ENSCGRG00000013892	Cpsf4	100	75.092	Cricetulus_griseus_crigri
ENSODEG00000009779	-	100	64.945	ENSCSEG00000019055	cpsf4	100	64.945	Cynoglossus_semilaevis
ENSODEG00000009779	-	100	64.576	ENSCVAG00000016528	cpsf4	100	64.576	Cyprinodon_variegatus
ENSODEG00000009779	-	100	65.818	ENSDARG00000020217	cpsf4	100	65.818	Danio_rerio
ENSODEG00000009779	-	100	74.725	ENSDNOG00000006344	CPSF4	100	74.725	Dasypus_novemcinctus
ENSODEG00000009779	-	77	73.733	ENSDORG00000000742	Cpsf4	100	73.733	Dipodomys_ordii
ENSODEG00000009779	-	95	44.444	FBgn0015621	Clp	93	45.126	Drosophila_melanogaster
ENSODEG00000009779	-	73	90.909	ENSETEG00000002608	CPSF4	70	90.909	Echinops_telfairi
ENSODEG00000009779	-	99	55.823	ENSEBUG00000012552	cpsf4	98	55.823	Eptatretus_burgeri
ENSODEG00000009779	-	100	73.563	ENSEASG00005002487	CPSF4	100	73.563	Equus_asinus_asinus
ENSODEG00000009779	-	100	75.092	ENSECAG00000007525	CPSF4	100	75.092	Equus_caballus
ENSODEG00000009779	-	58	73.786	ENSEEUG00000002158	CPSF4	73	73.786	Erinaceus_europaeus
ENSODEG00000009779	-	100	64.029	ENSELUG00000011481	cpsf4	100	64.029	Esox_lucius
ENSODEG00000009779	-	100	75.092	ENSFCAG00000015070	CPSF4	100	75.092	Felis_catus
ENSODEG00000009779	-	100	68.966	ENSFALG00000013799	CPSF4	100	68.966	Ficedula_albicollis
ENSODEG00000009779	-	64	48.428	ENSFALG00000012906	-	100	49.375	Ficedula_albicollis
ENSODEG00000009779	-	91	73.684	ENSFDAG00000014092	CPSF4	100	73.684	Fukomys_damarensis
ENSODEG00000009779	-	100	64.576	ENSFHEG00000010880	cpsf4	100	64.576	Fundulus_heteroclitus
ENSODEG00000009779	-	100	64.885	ENSGMOG00000002330	cpsf4	100	64.885	Gadus_morhua
ENSODEG00000009779	-	69	37.356	ENSGALG00000004441	-	90	37.356	Gallus_gallus
ENSODEG00000009779	-	100	68.966	ENSGALG00000004714	CPSF4	100	68.966	Gallus_gallus
ENSODEG00000009779	-	100	63.603	ENSGAFG00000010580	cpsf4	100	63.603	Gambusia_affinis
ENSODEG00000009779	-	100	64.729	ENSGACG00000007792	cpsf4	100	64.729	Gasterosteus_aculeatus
ENSODEG00000009779	-	100	72.161	ENSGAGG00000021835	CPSF4	100	72.161	Gopherus_agassizii
ENSODEG00000009779	-	71	59.140	ENSGAGG00000020579	-	100	59.140	Gopherus_agassizii
ENSODEG00000009779	-	100	74.359	ENSGGOG00000015131	CPSF4	100	74.359	Gorilla_gorilla
ENSODEG00000009779	-	100	64.945	ENSHBUG00000013699	cpsf4	100	64.945	Haplochromis_burtoni
ENSODEG00000009779	-	100	73.455	ENSHGLG00000017150	CPSF4	100	73.455	Heterocephalus_glaber_female
ENSODEG00000009779	-	100	49.784	ENSHGLG00100017302	-	100	48.988	Heterocephalus_glaber_male
ENSODEG00000009779	-	87	70.000	ENSHGLG00100009215	-	100	70.000	Heterocephalus_glaber_male
ENSODEG00000009779	-	100	63.197	ENSHCOG00000004397	cpsf4	100	63.197	Hippocampus_comes
ENSODEG00000009779	-	100	65.091	ENSIPUG00000017147	cpsf4	100	65.091	Ictalurus_punctatus
ENSODEG00000009779	-	100	75.092	ENSSTOG00000001688	CPSF4	100	75.092	Ictidomys_tridecemlineatus
ENSODEG00000009779	-	100	74.725	ENSJJAG00000019426	Cpsf4	100	74.725	Jaculus_jaculus
ENSODEG00000009779	-	100	63.100	ENSKMAG00000015642	cpsf4	100	63.100	Kryptolebias_marmoratus
ENSODEG00000009779	-	100	49.603	ENSLACG00000018470	-	100	49.603	Latimeria_chalumnae
ENSODEG00000009779	-	100	67.153	ENSLACG00000010938	CPSF4	100	67.153	Latimeria_chalumnae
ENSODEG00000009779	-	100	68.864	ENSLOCG00000004814	cpsf4	100	68.864	Lepisosteus_oculatus
ENSODEG00000009779	-	100	74.725	ENSLAFG00000000159	CPSF4	100	74.725	Loxodonta_africana
ENSODEG00000009779	-	100	74.359	ENSMFAG00000001462	CPSF4	100	74.359	Macaca_fascicularis
ENSODEG00000009779	-	100	74.359	ENSMMUG00000019191	CPSF4	100	74.359	Macaca_mulatta
ENSODEG00000009779	-	100	74.359	ENSMNEG00000032306	CPSF4	100	74.359	Macaca_nemestrina
ENSODEG00000009779	-	100	74.359	ENSMLEG00000034721	CPSF4	100	74.359	Mandrillus_leucophaeus
ENSODEG00000009779	-	100	65.455	ENSMAMG00000006244	cpsf4	100	65.455	Mastacembelus_armatus
ENSODEG00000009779	-	100	64.945	ENSMZEG00005007515	cpsf4	100	64.945	Maylandia_zebra
ENSODEG00000009779	-	87	66.960	ENSMGAG00000004235	CPSF4	100	66.960	Meleagris_gallopavo
ENSODEG00000009779	-	100	75.092	ENSMAUG00000021253	Cpsf4	100	75.092	Mesocricetus_auratus
ENSODEG00000009779	-	100	74.359	ENSMICG00000017429	CPSF4	100	74.359	Microcebus_murinus
ENSODEG00000009779	-	100	75.092	ENSMOCG00000014901	Cpsf4	100	75.092	Microtus_ochrogaster
ENSODEG00000009779	-	100	64.444	ENSMMOG00000001813	cpsf4	100	64.444	Mola_mola
ENSODEG00000009779	-	100	73.260	ENSMODG00000001367	CPSF4	100	73.260	Monodelphis_domestica
ENSODEG00000009779	-	100	65.441	ENSMALG00000012611	cpsf4	100	65.441	Monopterus_albus
ENSODEG00000009779	-	100	75.092	MGP_CAROLIEiJ_G0028012	Cpsf4	100	75.092	Mus_caroli
ENSODEG00000009779	-	100	75.092	ENSMUSG00000029625	Cpsf4	100	75.092	Mus_musculus
ENSODEG00000009779	-	100	75.092	MGP_PahariEiJ_G0024581	Cpsf4	100	75.092	Mus_pahari
ENSODEG00000009779	-	100	74.725	MGP_SPRETEiJ_G0029013	Cpsf4	100	74.725	Mus_spretus
ENSODEG00000009779	-	100	75.092	ENSMPUG00000016508	CPSF4	100	75.092	Mustela_putorius_furo
ENSODEG00000009779	-	87	70.485	ENSMLUG00000010980	CPSF4	100	70.485	Myotis_lucifugus
ENSODEG00000009779	-	100	75.092	ENSNGAG00000001567	Cpsf4	100	75.092	Nannospalax_galili
ENSODEG00000009779	-	92	64.372	ENSNBRG00000003943	cpsf4	98	64.372	Neolamprologus_brichardi
ENSODEG00000009779	-	100	74.717	ENSNLEG00000011074	CPSF4	100	74.717	Nomascus_leucogenys
ENSODEG00000009779	-	100	73.260	ENSMEUG00000006955	CPSF4	100	73.260	Notamacropus_eugenii
ENSODEG00000009779	-	100	74.359	ENSOPRG00000013663	CPSF4	100	74.359	Ochotona_princeps
ENSODEG00000009779	-	100	64.576	ENSONIG00000008495	cpsf4	100	64.576	Oreochromis_niloticus
ENSODEG00000009779	-	100	41.281	ENSOANG00000009568	-	100	40.925	Ornithorhynchus_anatinus
ENSODEG00000009779	-	87	71.008	ENSOANG00000007729	CPSF4	100	71.008	Ornithorhynchus_anatinus
ENSODEG00000009779	-	100	74.359	ENSOCUG00000002437	CPSF4	70	74.359	Oryctolagus_cuniculus
ENSODEG00000009779	-	100	63.235	ENSORLG00000022798	cpsf4	100	63.235	Oryzias_latipes
ENSODEG00000009779	-	100	63.235	ENSORLG00020008548	cpsf4	100	63.235	Oryzias_latipes_hni
ENSODEG00000009779	-	100	63.235	ENSORLG00015019575	cpsf4	100	63.235	Oryzias_latipes_hsok
ENSODEG00000009779	-	100	62.868	ENSOMEG00000005176	cpsf4	100	62.868	Oryzias_melastigma
ENSODEG00000009779	-	100	74.725	ENSOGAG00000010884	CPSF4	100	74.725	Otolemur_garnettii
ENSODEG00000009779	-	100	64.621	ENSOARG00000018668	CPSF4	100	64.621	Ovis_aries
ENSODEG00000009779	-	100	74.359	ENSPPAG00000043355	CPSF4	100	74.359	Pan_paniscus
ENSODEG00000009779	-	100	75.092	ENSPPRG00000003134	CPSF4	100	75.092	Panthera_pardus
ENSODEG00000009779	-	90	73.984	ENSPTIG00000005604	CPSF4	90	73.984	Panthera_tigris_altaica
ENSODEG00000009779	-	100	74.359	ENSPTRG00000019453	CPSF4	100	74.359	Pan_troglodytes
ENSODEG00000009779	-	100	74.359	ENSPANG00000023123	CPSF4	100	74.359	Papio_anubis
ENSODEG00000009779	-	100	65.468	ENSPKIG00000014278	cpsf4	100	65.468	Paramormyrops_kingsleyae
ENSODEG00000009779	-	78	49.239	ENSPSIG00000018198	-	100	49.239	Pelodiscus_sinensis
ENSODEG00000009779	-	77	70.370	ENSPSIG00000011229	CPSF4	100	70.370	Pelodiscus_sinensis
ENSODEG00000009779	-	100	63.347	ENSPMGG00000017735	cpsf4	100	62.948	Periophthalmus_magnuspinnatus
ENSODEG00000009779	-	100	75.092	ENSPEMG00000004508	Cpsf4	100	75.092	Peromyscus_maniculatus_bairdii
ENSODEG00000009779	-	100	73.260	ENSPCIG00000024776	CPSF4	100	73.260	Phascolarctos_cinereus
ENSODEG00000009779	-	100	63.603	ENSPFOG00000014912	cpsf4	100	63.603	Poecilia_formosa
ENSODEG00000009779	-	100	60.618	ENSPLAG00000009599	cpsf4	100	60.618	Poecilia_latipinna
ENSODEG00000009779	-	100	63.603	ENSPMEG00000009790	cpsf4	100	63.603	Poecilia_mexicana
ENSODEG00000009779	-	100	62.868	ENSPREG00000018166	cpsf4	100	62.868	Poecilia_reticulata
ENSODEG00000009779	-	87	72.996	ENSPPYG00000017378	CPSF4	100	72.996	Pongo_abelii
ENSODEG00000009779	-	100	74.359	ENSPCAG00000001892	CPSF4	100	74.359	Procavia_capensis
ENSODEG00000009779	-	100	74.725	ENSPCOG00000012771	CPSF4	100	74.725	Propithecus_coquereli
ENSODEG00000009779	-	100	69.597	ENSPVAG00000007531	CPSF4	100	69.597	Pteropus_vampyrus
ENSODEG00000009779	-	100	64.945	ENSPNYG00000018559	cpsf4	100	64.945	Pundamilia_nyererei
ENSODEG00000009779	-	100	66.788	ENSPNAG00000003736	cpsf4	100	66.788	Pygocentrus_nattereri
ENSODEG00000009779	-	100	73.180	ENSRNOG00000000985	Cpsf4	100	73.180	Rattus_norvegicus
ENSODEG00000009779	-	87	72.689	ENSRBIG00000033886	CPSF4	100	72.689	Rhinopithecus_bieti
ENSODEG00000009779	-	100	72.797	ENSRROG00000040431	CPSF4	100	72.797	Rhinopithecus_roxellana
ENSODEG00000009779	-	100	74.359	ENSSBOG00000020493	CPSF4	100	74.359	Saimiri_boliviensis_boliviensis
ENSODEG00000009779	-	100	73.260	ENSSHAG00000011533	CPSF4	100	73.260	Sarcophilus_harrisii
ENSODEG00000009779	-	100	66.429	ENSSFOG00015007883	cpsf4	100	66.429	Scleropages_formosus
ENSODEG00000009779	-	100	65.476	ENSSMAG00000006374	cpsf4	100	65.476	Scophthalmus_maximus
ENSODEG00000009779	-	100	66.912	ENSSDUG00000018887	cpsf4	100	66.912	Seriola_dumerili
ENSODEG00000009779	-	100	66.912	ENSSLDG00000019078	cpsf4	100	66.912	Seriola_lalandi_dorsalis
ENSODEG00000009779	-	87	73.109	ENSSARG00000012416	CPSF4	100	73.109	Sorex_araneus
ENSODEG00000009779	-	100	71.062	ENSSPUG00000003549	CPSF4	100	71.062	Sphenodon_punctatus
ENSODEG00000009779	-	95	48.750	ENSSPUG00000014803	-	97	48.750	Sphenodon_punctatus
ENSODEG00000009779	-	100	67.729	ENSSPAG00000006174	cpsf4	100	67.729	Stegastes_partitus
ENSODEG00000009779	-	100	73.180	ENSSSCG00000026896	CPSF4	100	73.180	Sus_scrofa
ENSODEG00000009779	-	100	67.681	ENSTGUG00000007552	CPSF4	100	67.681	Taeniopygia_guttata
ENSODEG00000009779	-	100	63.670	ENSTRUG00000024220	cpsf4	100	63.670	Takifugu_rubripes
ENSODEG00000009779	-	100	64.312	ENSTNIG00000006265	cpsf4	100	63.941	Tetraodon_nigroviridis
ENSODEG00000009779	-	87	64.557	ENSTBEG00000011406	CPSF4	100	64.557	Tupaia_belangeri
ENSODEG00000009779	-	79	90.909	ENSTTRG00000003007	CPSF4	100	62.637	Tursiops_truncatus
ENSODEG00000009779	-	90	71.548	ENSUAMG00000008051	CPSF4	85	71.548	Ursus_americanus
ENSODEG00000009779	-	100	73.180	ENSUMAG00000009474	CPSF4	100	73.180	Ursus_maritimus
ENSODEG00000009779	-	100	73.180	ENSVVUG00000008824	CPSF4	100	73.180	Vulpes_vulpes
ENSODEG00000009779	-	100	67.138	ENSXETG00000009892	cpsf4	100	67.138	Xenopus_tropicalis
ENSODEG00000009779	-	99	46.667	ENSXETG00000004641	cpsf4l	99	46.667	Xenopus_tropicalis
ENSODEG00000009779	-	100	63.235	ENSXCOG00000016040	cpsf4	100	63.235	Xiphophorus_couchianus
ENSODEG00000009779	-	100	63.603	ENSXMAG00000024670	cpsf4	100	63.603	Xiphophorus_maculatus