EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000009844 (Gene tree)
Gene ID: -
Gene Symbol: PAPOLB
Alias: PAPT
Full Name: poly(A) polymerase beta
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 2085 bases
Position: chrJH651546.1:13709282-13711366
Accession: 15970
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000013308	PAP_RNA-bind	PF04926.15	1.7e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000013485	PAPOLB-201	1986	-	ENSODEP00000013308	661 (aa)	-	-

Gene Model

Click here to download ENSODEG00000009844's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000009844's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000009844	PAPOLB	62	73.479	ENSODEG00000012424	PAPOLG	96	73.479

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000009844	PAPOLB	92	82.825	ENSG00000218823	PAPOLB	98	83.146	Homo_sapiens
ENSODEG00000009844	PAPOLB	92	79.902	ENSANAG00000033074	PAPOLB	98	79.902	Aotus_nancymaae
ENSODEG00000009844	PAPOLB	100	82.249	ENSBTAG00000052734	PAPOLB	99	82.249	Bos_taurus
ENSODEG00000009844	PAPOLB	75	94.141	ENSCPOG00000021527	PAPOLB	90	94.141	Cavia_porcellus
ENSODEG00000009844	PAPOLB	95	96.651	ENSCLAG00000004689	PAPOLB	100	96.651	Chinchilla_lanigera
ENSODEG00000009844	PAPOLB	98	78.645	ENSDNOG00000033378	PAPOLB	97	78.645	Dasypus_novemcinctus
ENSODEG00000009844	PAPOLB	91	87.255	ENSDORG00000001140	Papolb	99	86.010	Dipodomys_ordii
ENSODEG00000009844	PAPOLB	98	81.682	ENSEASG00005021531	PAPOLB	99	80.029	Equus_asinus_asinus
ENSODEG00000009844	PAPOLB	89	86.248	ENSHGLG00000002987	-	98	86.248	Heterocephalus_glaber_female
ENSODEG00000009844	PAPOLB	94	87.816	ENSJJAG00000012212	Papolb	94	86.350	Jaculus_jaculus
ENSODEG00000009844	PAPOLB	81	87.431	ENSMFAG00000031074	PAPOLB	98	87.431	Macaca_fascicularis
ENSODEG00000009844	PAPOLB	94	82.915	ENSMMUG00000043732	PAPOLB	99	77.457	Macaca_mulatta
ENSODEG00000009844	PAPOLB	95	87.500	MGP_CAROLIEiJ_G0027962	Papolb	99	87.500	Mus_caroli
ENSODEG00000009844	PAPOLB	95	87.500	ENSMUSG00000074817	Papolb	99	87.500	Mus_musculus
ENSODEG00000009844	PAPOLB	95	86.875	MGP_PahariEiJ_G0024534	Papolb	99	86.875	Mus_pahari
ENSODEG00000009844	PAPOLB	95	87.500	MGP_SPRETEiJ_G0028966	Papolb	99	87.500	Mus_spretus
ENSODEG00000009844	PAPOLB	95	83.703	ENSMLUG00000029802	PAPOLB	97	83.703	Myotis_lucifugus
ENSODEG00000009844	PAPOLB	94	83.148	ENSOCUG00000022988	PAPOLB	99	86.250	Oryctolagus_cuniculus
ENSODEG00000009844	PAPOLB	99	81.197	ENSOGAG00000031103	PAPOLB	99	81.197	Otolemur_garnettii
ENSODEG00000009844	PAPOLB	100	77.959	ENSPTRG00000045383	PAPOLB	97	78.254	Pan_troglodytes
ENSODEG00000009844	PAPOLB	93	86.080	ENSUMAG00000007631	PAPOLB	99	86.080	Ursus_maritimus