EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000010029 (Gene tree)
Gene ID: 101561747
Gene Symbol: -
Alias: -
Full Name: serine and arginine rich splicing factor 7
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 6019 bases
Position: chrJH651535.1:7589788-7595806
Accession: 101561747
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000013575	RRM_1	PF00076.22	1.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000013753	-	1080	XM_004627627	ENSODEP00000013575	238 (aa)	XP_004627684	UPI000184EC6C

Gene Model

Click here to download ENSODEG00000010029's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000010029's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000010029	-	57	72.464	ENSODEG00000004332	-	76	76.471

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000010029	-	100	98.739	ENSG00000115875	SRSF7	100	98.739	Homo_sapiens
ENSODEG00000010029	-	97	96.639	ENSAMEG00000015988	SRSF7	89	96.639	Ailuropoda_melanoleuca
ENSODEG00000010029	-	50	92.500	ENSACIG00000009890	srsf7b	92	92.500	Amphilophus_citrinellus
ENSODEG00000010029	-	50	99.167	ENSACAG00000006082	SRSF7	51	99.167	Anolis_carolinensis
ENSODEG00000010029	-	100	77.686	ENSANAG00000019399	SRSF7	88	100.000	Aotus_nancymaae
ENSODEG00000010029	-	50	93.333	ENSAMXG00000007005	srsf7b	57	93.333	Astyanax_mexicanus
ENSODEG00000010029	-	100	98.319	ENSBTAG00000014891	SRSF7	100	98.319	Bos_taurus
ENSODEG00000010029	-	100	98.739	ENSCJAG00000015185	SRSF7	100	98.739	Callithrix_jacchus
ENSODEG00000010029	-	100	99.580	ENSCAFG00000029620	SRSF7	100	99.580	Canis_familiaris
ENSODEG00000010029	-	100	99.580	ENSCAFG00020022807	SRSF7	100	99.580	Canis_lupus_dingo
ENSODEG00000010029	-	55	65.152	ENSCAFG00020013547	-	75	66.942	Canis_lupus_dingo
ENSODEG00000010029	-	100	99.580	ENSCHIG00000019180	SRSF7	100	99.580	Capra_hircus
ENSODEG00000010029	-	100	98.319	ENSTSYG00000012273	SRSF7	100	98.319	Carlito_syrichta
ENSODEG00000010029	-	100	100.000	ENSCPOG00000033318	SRSF7	100	100.000	Cavia_porcellus
ENSODEG00000010029	-	100	98.739	ENSCATG00000031728	SRSF7	100	98.739	Cercocebus_atys
ENSODEG00000010029	-	100	100.000	ENSCLAG00000005235	SRSF7	100	100.000	Chinchilla_lanigera
ENSODEG00000010029	-	50	100.000	ENSCSAG00000012296	SRSF7	50	100.000	Chlorocebus_sabaeus
ENSODEG00000010029	-	100	95.378	ENSCHOG00000002390	-	100	95.378	Choloepus_hoffmanni
ENSODEG00000010029	-	50	99.167	ENSCPBG00000018247	-	88	99.167	Chrysemys_picta_bellii
ENSODEG00000010029	-	50	96.667	ENSCPBG00000018252	-	88	96.667	Chrysemys_picta_bellii
ENSODEG00000010029	-	100	98.739	ENSCANG00000040757	SRSF7	100	98.739	Colobus_angolensis_palliatus
ENSODEG00000010029	-	100	99.580	ENSCGRG00001018245	Srsf7	100	99.580	Cricetulus_griseus_chok1gshd
ENSODEG00000010029	-	53	74.400	ENSCSEG00000006378	srsf7a	78	77.477	Cynoglossus_semilaevis
ENSODEG00000010029	-	50	92.500	ENSDARG00000101057	srsf7b	79	92.500	Danio_rerio
ENSODEG00000010029	-	100	99.160	ENSDNOG00000007821	SRSF7	100	99.160	Dasypus_novemcinctus
ENSODEG00000010029	-	100	100.000	ENSDORG00000008616	Srsf7	100	100.000	Dipodomys_ordii
ENSODEG00000010029	-	70	49.714	ENSEBUG00000002677	-	62	63.542	Eptatretus_burgeri
ENSODEG00000010029	-	65	62.338	ENSEBUG00000004912	srsf7a	51	76.471	Eptatretus_burgeri
ENSODEG00000010029	-	100	99.580	ENSEASG00005005547	SRSF7	100	99.580	Equus_asinus_asinus
ENSODEG00000010029	-	100	99.580	ENSECAG00000008664	SRSF7	100	99.580	Equus_caballus
ENSODEG00000010029	-	100	77.731	ENSEEUG00000014487	SRSF7	100	77.731	Erinaceus_europaeus
ENSODEG00000010029	-	54	74.046	ENSELUG00000016922	srsf7a	82	75.630	Esox_lucius
ENSODEG00000010029	-	96	70.175	ENSELUG00000018155	srsf7b	86	85.833	Esox_lucius
ENSODEG00000010029	-	100	91.597	ENSFCAG00000031143	SRSF7	100	88.235	Felis_catus
ENSODEG00000010029	-	58	62.143	ENSFCAG00000028644	-	79	61.017	Felis_catus
ENSODEG00000010029	-	100	79.832	ENSFDAG00000017258	-	52	86.667	Fukomys_damarensis
ENSODEG00000010029	-	100	100.000	ENSFDAG00000016030	-	100	100.000	Fukomys_damarensis
ENSODEG00000010029	-	51	77.686	ENSFHEG00000007159	srsf7a	59	78.378	Fundulus_heteroclitus
ENSODEG00000010029	-	51	89.344	ENSFHEG00000023046	srsf7b	53	89.167	Fundulus_heteroclitus
ENSODEG00000010029	-	50	95.000	ENSGALG00000033120	SRSF7	87	95.000	Gallus_gallus
ENSODEG00000010029	-	50	96.667	ENSGAGG00000003553	SRSF7	88	96.667	Gopherus_agassizii
ENSODEG00000010029	-	50	92.500	ENSGAGG00000016294	-	88	92.500	Gopherus_agassizii
ENSODEG00000010029	-	100	98.739	ENSGGOG00000014620	SRSF7	100	98.739	Gorilla_gorilla
ENSODEG00000010029	-	100	100.000	ENSHGLG00000013954	-	100	100.000	Heterocephalus_glaber_female
ENSODEG00000010029	-	50	74.400	ENSHGLG00000005295	-	88	74.400	Heterocephalus_glaber_female
ENSODEG00000010029	-	100	100.000	ENSHGLG00100006124	-	100	100.000	Heterocephalus_glaber_male
ENSODEG00000010029	-	50	74.400	ENSHGLG00100014570	-	88	74.400	Heterocephalus_glaber_male
ENSODEG00000010029	-	50	95.000	ENSIPUG00000011708	srsf7	68	95.000	Ictalurus_punctatus
ENSODEG00000010029	-	100	100.000	ENSSTOG00000004389	SRSF7	100	100.000	Ictidomys_tridecemlineatus
ENSODEG00000010029	-	62	65.101	ENSJJAG00000020230	-	72	71.074	Jaculus_jaculus
ENSODEG00000010029	-	100	100.000	ENSJJAG00000023079	Srsf7	100	100.000	Jaculus_jaculus
ENSODEG00000010029	-	59	53.571	ENSLACG00000008131	SRSF3	71	55.000	Latimeria_chalumnae
ENSODEG00000010029	-	99	82.008	ENSLACG00000004052	SRSF7	50	99.160	Latimeria_chalumnae
ENSODEG00000010029	-	89	63.679	ENSLACG00000018688	srsf7a	54	80.531	Latimeria_chalumnae
ENSODEG00000010029	-	50	99.160	ENSLOCG00000015778	srsf7b	50	99.167	Lepisosteus_oculatus
ENSODEG00000010029	-	100	97.934	ENSLAFG00000005666	SRSF7	100	97.934	Loxodonta_africana
ENSODEG00000010029	-	100	97.479	ENSMFAG00000001980	SRSF7	100	97.479	Macaca_fascicularis
ENSODEG00000010029	-	100	98.739	ENSMMUG00000011025	SRSF7	99	88.210	Macaca_mulatta
ENSODEG00000010029	-	100	98.739	ENSMNEG00000036669	SRSF7	100	98.739	Macaca_nemestrina
ENSODEG00000010029	-	100	98.739	ENSMLEG00000038852	SRSF7	100	98.739	Mandrillus_leucophaeus
ENSODEG00000010029	-	50	94.167	ENSMAMG00000017138	srsf7b	53	94.167	Mastacembelus_armatus
ENSODEG00000010029	-	100	99.580	ENSMAUG00000017430	Srsf7	100	99.580	Mesocricetus_auratus
ENSODEG00000010029	-	68	47.561	ENSMAUG00000011430	-	62	55.789	Mesocricetus_auratus
ENSODEG00000010029	-	99	100.000	ENSMICG00000005046	SRSF7	100	100.000	Microcebus_murinus
ENSODEG00000010029	-	100	82.773	ENSMOCG00000022763	-	51	95.833	Microtus_ochrogaster
ENSODEG00000010029	-	100	83.193	ENSMOCG00000012617	-	100	83.193	Microtus_ochrogaster
ENSODEG00000010029	-	100	97.059	ENSMODG00000008669	-	100	97.059	Monodelphis_domestica
ENSODEG00000010029	-	50	94.958	ENSMODG00000023693	-	51	95.000	Monodelphis_domestica
ENSODEG00000010029	-	100	98.739	MGP_CAROLIEiJ_G0021902	Srsf7	100	98.739	Mus_caroli
ENSODEG00000010029	-	100	98.739	ENSMUSG00000024097	Srsf7	100	98.739	Mus_musculus
ENSODEG00000010029	-	100	98.319	MGP_PahariEiJ_G0020891	Srsf7	100	98.319	Mus_pahari
ENSODEG00000010029	-	100	98.739	MGP_SPRETEiJ_G0022817	Srsf7	100	98.739	Mus_spretus
ENSODEG00000010029	-	50	91.667	ENSMLUG00000015692	-	54	91.667	Myotis_lucifugus
ENSODEG00000010029	-	100	98.739	ENSMLUG00000009536	SRSF7	100	98.739	Myotis_lucifugus
ENSODEG00000010029	-	100	100.000	ENSNGAG00000014431	Srsf7	100	100.000	Nannospalax_galili
ENSODEG00000010029	-	100	98.739	ENSNLEG00000016349	SRSF7	100	98.739	Nomascus_leucogenys
ENSODEG00000010029	-	100	78.992	ENSMEUG00000016459	-	51	99.167	Notamacropus_eugenii
ENSODEG00000010029	-	100	92.017	ENSOPRG00000010234	SRSF7	100	88.655	Ochotona_princeps
ENSODEG00000010029	-	100	100.000	ENSOCUG00000004087	SRSF7	100	100.000	Oryctolagus_cuniculus
ENSODEG00000010029	-	100	98.347	ENSOGAG00000010169	SRSF7	100	98.347	Otolemur_garnettii
ENSODEG00000010029	-	100	97.925	ENSOARG00000008771	SRSF7	100	97.925	Ovis_aries
ENSODEG00000010029	-	100	98.739	ENSPPAG00000017907	SRSF7	100	98.739	Pan_paniscus
ENSODEG00000010029	-	100	91.597	ENSPPRG00000003682	SRSF7	100	88.235	Panthera_pardus
ENSODEG00000010029	-	100	91.597	ENSPTIG00000006350	SRSF7	100	88.235	Panthera_tigris_altaica
ENSODEG00000010029	-	100	98.739	ENSPTRG00000011851	SRSF7	100	98.739	Pan_troglodytes
ENSODEG00000010029	-	100	98.739	ENSPANG00000018079	SRSF7	100	98.739	Papio_anubis
ENSODEG00000010029	-	50	95.833	ENSPKIG00000022669	SRSF7	81	95.833	Paramormyrops_kingsleyae
ENSODEG00000010029	-	61	89.041	ENSPKIG00000017425	srsf7b	85	86.000	Paramormyrops_kingsleyae
ENSODEG00000010029	-	56	68.382	ENSPMGG00000021890	srsf7a	80	76.577	Periophthalmus_magnuspinnatus
ENSODEG00000010029	-	100	99.580	ENSPEMG00000015449	Srsf7	100	99.580	Peromyscus_maniculatus_bairdii
ENSODEG00000010029	-	52	72.358	ENSPMAG00000004472	srsf7a	54	77.358	Petromyzon_marinus
ENSODEG00000010029	-	100	97.059	ENSPCIG00000020694	-	100	97.059	Phascolarctos_cinereus
ENSODEG00000010029	-	50	95.000	ENSPCIG00000020726	-	88	95.000	Phascolarctos_cinereus
ENSODEG00000010029	-	51	89.344	ENSPFOG00000008820	srsf7b	52	89.167	Poecilia_formosa
ENSODEG00000010029	-	51	89.344	ENSPLAG00000023806	srsf7b	52	89.167	Poecilia_latipinna
ENSODEG00000010029	-	51	89.344	ENSPREG00000006149	srsf7b	55	89.167	Poecilia_reticulata
ENSODEG00000010029	-	51	77.049	ENSPREG00000020685	srsf7a	86	78.378	Poecilia_reticulata
ENSODEG00000010029	-	100	98.739	ENSPPYG00000012480	SRSF7	100	98.739	Pongo_abelii
ENSODEG00000010029	-	100	91.176	ENSPCAG00000011348	SRSF7	100	86.555	Procavia_capensis
ENSODEG00000010029	-	100	90.336	ENSPCOG00000023721	-	91	90.336	Propithecus_coquereli
ENSODEG00000010029	-	86	97.549	ENSPCOG00000019422	-	95	97.549	Propithecus_coquereli
ENSODEG00000010029	-	100	87.815	ENSPCOG00000025051	-	100	87.815	Propithecus_coquereli
ENSODEG00000010029	-	99	91.139	ENSPVAG00000012076	SRSF7	99	87.764	Pteropus_vampyrus
ENSODEG00000010029	-	50	95.000	ENSPNAG00000012546	srsf7b	50	95.000	Pygocentrus_nattereri
ENSODEG00000010029	-	100	98.739	ENSRNOG00000027360	Srsf7	100	98.739	Rattus_norvegicus
ENSODEG00000010029	-	51	86.885	ENSRNOG00000008398	AABR07055789.1	72	87.500	Rattus_norvegicus
ENSODEG00000010029	-	96	97.380	ENSRBIG00000024695	SRSF7	100	88.596	Rhinopithecus_bieti
ENSODEG00000010029	-	100	98.739	ENSRROG00000005080	SRSF7	100	98.739	Rhinopithecus_roxellana
ENSODEG00000010029	-	100	98.739	ENSSBOG00000025074	SRSF7	100	98.739	Saimiri_boliviensis_boliviensis
ENSODEG00000010029	-	50	94.958	ENSSHAG00000004597	-	51	95.000	Sarcophilus_harrisii
ENSODEG00000010029	-	50	95.000	ENSSFOG00015007348	SRSF7	51	95.000	Scleropages_formosus
ENSODEG00000010029	-	73	80.460	ENSSDUG00000021338	srsf7b	84	91.667	Seriola_dumerili
ENSODEG00000010029	-	51	93.443	ENSSLDG00000021463	srsf7b	68	93.333	Seriola_lalandi_dorsalis
ENSODEG00000010029	-	50	76.860	ENSSPAG00000022192	srsf7a	87	77.477	Stegastes_partitus
ENSODEG00000010029	-	51	93.443	ENSSPAG00000017204	srsf7b	85	93.333	Stegastes_partitus
ENSODEG00000010029	-	100	99.580	ENSSSCG00000008484	SRSF7	100	99.580	Sus_scrofa
ENSODEG00000010029	-	50	95.833	ENSTGUG00000002080	-	50	95.833	Taeniopygia_guttata
ENSODEG00000010029	-	96	71.930	ENSTBEG00000004604	SRSF7	100	71.930	Tupaia_belangeri
ENSODEG00000010029	-	96	88.158	ENSTTRG00000014324	SRSF7	100	84.649	Tursiops_truncatus
ENSODEG00000010029	-	50	100.000	ENSUAMG00000025051	-	88	100.000	Ursus_americanus
ENSODEG00000010029	-	55	70.992	ENSUMAG00000023107	-	61	81.356	Ursus_maritimus
ENSODEG00000010029	-	100	99.580	ENSUMAG00000013534	SRSF7	100	99.580	Ursus_maritimus
ENSODEG00000010029	-	96	92.982	ENSVPAG00000003316	SRSF7	100	92.982	Vicugna_pacos
ENSODEG00000010029	-	50	100.000	ENSVVUG00000018767	-	88	100.000	Vulpes_vulpes
ENSODEG00000010029	-	59	64.336	ENSVVUG00000006092	-	70	72.603	Vulpes_vulpes
ENSODEG00000010029	-	50	95.000	ENSXETG00000025300	srsf7	51	95.000	Xenopus_tropicalis
ENSODEG00000010029	-	51	77.049	ENSXCOG00000009381	srsf7a	86	77.477	Xiphophorus_couchianus
ENSODEG00000010029	-	53	88.800	ENSXCOG00000010843	srsf7b	82	89.167	Xiphophorus_couchianus