EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000010041 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 1369 bases
Position: chrJH651546.1:15146605-15147973
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000013590	RRM_1	PF00076.22	9.8e-05	1	1
ENSODEP00000013591	La	PF05383.17	1e-22	1	1
ENSODEP00000013590	La	PF05383.17	1.3e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000013769	-	498	-	ENSODEP00000013590	165 (aa)	-	-
ENSODET00000013770	-	423	-	ENSODEP00000013591	140 (aa)	-	-

Gene Model

Click here to download ENSODEG00000010041's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000010041's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000010041	-	99	89.855	ENSODEG00000010185	-	98	89.744
ENSODEG00000010041	-	99	75.152	ENSODEG00000006639	-	90	75.152

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000010041	-	99	88.406	ENSG00000138385	SSB	88	91.509	Homo_sapiens
ENSODEG00000010041	-	94	61.935	ENSACIG00000001738	ssb	88	62.602	Amphilophus_citrinellus
ENSODEG00000010041	-	99	87.681	ENSCJAG00000045073	SSB	85	92.174	Callithrix_jacchus
ENSODEG00000010041	-	99	88.406	ENSCCAG00000035147	SSB	86	93.043	Cebus_capucinus
ENSODEG00000010041	-	99	89.130	ENSCLAG00000004563	-	98	91.026	Chinchilla_lanigera
ENSODEG00000010041	-	84	66.949	ENSFHEG00000003003	-	100	66.949	Fundulus_heteroclitus
ENSODEG00000010041	-	84	88.034	ENSGGOG00000011507	-	88	92.308	Gorilla_gorilla
ENSODEG00000010041	-	99	84.783	ENSHGLG00000011331	-	98	88.462	Heterocephalus_glaber_female
ENSODEG00000010041	-	95	90.446	ENSHGLG00000018387	-	96	90.446	Heterocephalus_glaber_female
ENSODEG00000010041	-	95	85.987	ENSHGLG00000001810	-	72	85.987	Heterocephalus_glaber_female
ENSODEG00000010041	-	84	88.034	ENSHGLG00100003175	-	99	88.034	Heterocephalus_glaber_male
ENSODEG00000010041	-	95	88.535	ENSHGLG00100007213	-	81	88.535	Heterocephalus_glaber_male
ENSODEG00000010041	-	99	85.507	ENSHGLG00100014205	-	88	86.164	Heterocephalus_glaber_male
ENSODEG00000010041	-	88	86.992	ENSHGLG00100006391	-	92	86.992	Heterocephalus_glaber_male
ENSODEG00000010041	-	87	90.164	ENSHGLG00100013137	-	75	90.164	Heterocephalus_glaber_male
ENSODEG00000010041	-	99	65.217	ENSHGLG00100008353	-	70	65.625	Heterocephalus_glaber_male
ENSODEG00000010041	-	93	67.974	ENSLAFG00000026721	-	51	67.974	Loxodonta_africana
ENSODEG00000010041	-	99	88.406	ENSMFAG00000039066	SSB	85	93.043	Macaca_fascicularis
ENSODEG00000010041	-	99	88.406	ENSMMUG00000023051	SSB	85	93.043	Macaca_mulatta
ENSODEG00000010041	-	99	88.406	ENSMNEG00000028321	SSB	85	93.043	Macaca_nemestrina
ENSODEG00000010041	-	99	88.406	ENSMLEG00000035717	SSB	88	93.043	Mandrillus_leucophaeus
ENSODEG00000010041	-	95	75.159	ENSMGAG00000010328	SSB	76	75.159	Meleagris_gallopavo
ENSODEG00000010041	-	99	85.507	ENSMAUG00000019529	-	99	88.079	Mesocricetus_auratus
ENSODEG00000010041	-	99	84.058	ENSMOCG00000001823	-	99	86.755	Microtus_ochrogaster
ENSODEG00000010041	-	82	65.217	ENSMMOG00000002088	-	88	65.217	Mola_mola
ENSODEG00000010041	-	99	84.783	MGP_CAROLIEiJ_G0023629	-	98	85.256	Mus_caroli
ENSODEG00000010041	-	99	84.783	ENSMUSG00000068882	Ssb	98	85.256	Mus_musculus
ENSODEG00000010041	-	99	84.783	MGP_PahariEiJ_G0025081	-	98	85.256	Mus_pahari
ENSODEG00000010041	-	99	84.783	MGP_SPRETEiJ_G0024551	Ssb	98	85.256	Mus_spretus
ENSODEG00000010041	-	82	90.435	ENSNGAG00000012920	-	82	90.435	Nannospalax_galili
ENSODEG00000010041	-	99	88.406	ENSNLEG00000004958	SSB	86	93.043	Nomascus_leucogenys
ENSODEG00000010041	-	82	83.704	ENSMEUG00000001650	-	54	83.704	Notamacropus_eugenii
ENSODEG00000010041	-	99	88.406	ENSPPAG00000042673	SSB	86	93.043	Pan_paniscus
ENSODEG00000010041	-	92	82.171	ENSPPAG00000032427	-	100	82.171	Pan_paniscus
ENSODEG00000010041	-	99	88.406	ENSPTRG00000012620	SSB	86	93.043	Pan_troglodytes
ENSODEG00000010041	-	99	88.406	ENSPANG00000007440	SSB	85	93.043	Papio_anubis
ENSODEG00000010041	-	99	85.507	ENSPEMG00000021746	-	99	88.079	Peromyscus_maniculatus_bairdii
ENSODEG00000010041	-	94	78.626	ENSPCIG00000016333	-	94	78.626	Phascolarctos_cinereus
ENSODEG00000010041	-	95	87.261	ENSPCOG00000015741	-	92	86.207	Propithecus_coquereli
ENSODEG00000010041	-	92	93.023	ENSRBIG00000041972	SSB	88	93.043	Rhinopithecus_bieti
ENSODEG00000010041	-	80	80.303	ENSRBIG00000041232	-	83	80.303	Rhinopithecus_bieti
ENSODEG00000010041	-	92	78.947	ENSRROG00000031684	-	86	80.822	Rhinopithecus_roxellana
ENSODEG00000010041	-	99	88.406	ENSRROG00000040346	SSB	85	93.043	Rhinopithecus_roxellana
ENSODEG00000010041	-	99	88.406	ENSSBOG00000027204	SSB	86	93.043	Saimiri_boliviensis_boliviensis
ENSODEG00000010041	-	98	61.314	ENSXCOG00000019109	ssb	93	60.938	Xiphophorus_couchianus