EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000010185 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 5129 bases
Position: chrJH651580.1:10515507-10520635
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000013782	RRM_1	PF00076.22	3.1e-11	1	1
ENSODEP00000013781	RRM_1	PF00076.22	5.1e-05	1	1
ENSODEP00000013781	La	PF05383.17	1.5e-22	1	1
ENSODEP00000013782	La	PF05383.17	2e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000013965	-	558	-	ENSODEP00000013782	185 (aa)	-	-
ENSODET00000013964	-	471	-	ENSODEP00000013781	156 (aa)	-	-

Gene Model

Click here to download ENSODEG00000010185's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000010185's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000010185	-	99	78.981	ENSODEG00000006639	-	84	82.692
ENSODEG00000010185	-	98	89.744	ENSODEG00000010041	-	99	89.855

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000010185	-	100	97.838	ENSG00000138385	SSB	100	97.826	Homo_sapiens
ENSODEG00000010185	-	98	62.821	ENSACIG00000001738	ssb	88	63.415	Amphilophus_citrinellus
ENSODEG00000010185	-	100	97.838	ENSCJAG00000045073	SSB	85	98.261	Callithrix_jacchus
ENSODEG00000010185	-	100	98.378	ENSCCAG00000035147	SSB	86	99.130	Cebus_capucinus
ENSODEG00000010185	-	100	97.484	ENSCLAG00000004563	-	100	97.484	Chinchilla_lanigera
ENSODEG00000010185	-	91	44.253	FBgn0011638	La	51	42.929	Drosophila_melanogaster
ENSODEG00000010185	-	100	96.216	ENSEEUG00000008077	SSB	54	96.216	Erinaceus_europaeus
ENSODEG00000010185	-	76	67.797	ENSFHEG00000003003	-	100	67.797	Fundulus_heteroclitus
ENSODEG00000010185	-	82	96.875	ENSGGOG00000011507	-	88	97.692	Gorilla_gorilla
ENSODEG00000010185	-	99	91.304	ENSHGLG00000001810	-	85	91.304	Heterocephalus_glaber_female
ENSODEG00000010185	-	100	90.798	ENSHGLG00000018387	-	97	95.570	Heterocephalus_glaber_female
ENSODEG00000010185	-	99	91.720	ENSHGLG00000011331	-	98	94.872	Heterocephalus_glaber_female
ENSODEG00000010185	-	100	75.000	ENSHGLG00100008353	-	68	75.000	Heterocephalus_glaber_male
ENSODEG00000010185	-	83	89.147	ENSHGLG00100006391	-	97	89.147	Heterocephalus_glaber_male
ENSODEG00000010185	-	98	91.026	ENSHGLG00100007213	-	86	92.169	Heterocephalus_glaber_male
ENSODEG00000010185	-	98	87.349	ENSHGLG00100014205	-	85	95.425	Heterocephalus_glaber_male
ENSODEG00000010185	-	75	94.017	ENSHGLG00100003175	-	99	94.017	Heterocephalus_glaber_male
ENSODEG00000010185	-	78	95.902	ENSHGLG00100013137	-	75	95.902	Heterocephalus_glaber_male
ENSODEG00000010185	-	99	70.652	ENSLAFG00000026721	-	62	70.652	Loxodonta_africana
ENSODEG00000010185	-	100	87.027	ENSMFAG00000041478	-	54	87.027	Macaca_fascicularis
ENSODEG00000010185	-	100	97.297	ENSMFAG00000039066	SSB	85	99.130	Macaca_fascicularis
ENSODEG00000010185	-	100	97.297	ENSMMUG00000023051	SSB	85	99.130	Macaca_mulatta
ENSODEG00000010185	-	100	97.297	ENSMNEG00000028321	SSB	85	99.130	Macaca_nemestrina
ENSODEG00000010185	-	100	87.027	ENSMNEG00000034698	-	54	87.027	Macaca_nemestrina
ENSODEG00000010185	-	100	97.297	ENSMLEG00000035717	SSB	88	99.130	Mandrillus_leucophaeus
ENSODEG00000010185	-	100	79.459	ENSMGAG00000010328	SSB	90	79.459	Meleagris_gallopavo
ENSODEG00000010185	-	95	94.595	ENSMAUG00000019529	-	99	94.040	Mesocricetus_auratus
ENSODEG00000010185	-	95	93.243	ENSMOCG00000001823	-	99	92.715	Microtus_ochrogaster
ENSODEG00000010185	-	74	66.087	ENSMMOG00000002088	-	88	66.087	Mola_mola
ENSODEG00000010185	-	98	76.923	ENSMODG00000007027	-	50	75.581	Monodelphis_domestica
ENSODEG00000010185	-	100	92.973	MGP_CAROLIEiJ_G0023629	-	100	92.935	Mus_caroli
ENSODEG00000010185	-	100	92.973	ENSMUSG00000068882	Ssb	100	92.935	Mus_musculus
ENSODEG00000010185	-	100	92.973	MGP_PahariEiJ_G0025081	-	100	92.935	Mus_pahari
ENSODEG00000010185	-	100	92.973	MGP_SPRETEiJ_G0024551	Ssb	100	92.935	Mus_spretus
ENSODEG00000010185	-	74	95.652	ENSNGAG00000012920	-	82	95.652	Nannospalax_galili
ENSODEG00000010185	-	100	97.838	ENSNLEG00000004958	SSB	86	99.130	Nomascus_leucogenys
ENSODEG00000010185	-	88	88.344	ENSMEUG00000001650	-	66	88.344	Notamacropus_eugenii
ENSODEG00000010185	-	63	96.429	ENSOPRG00000008479	-	52	96.429	Ochotona_princeps
ENSODEG00000010185	-	100	97.838	ENSPPAG00000042673	SSB	86	99.130	Pan_paniscus
ENSODEG00000010185	-	95	77.841	ENSPPAG00000032427	-	100	86.822	Pan_paniscus
ENSODEG00000010185	-	100	97.838	ENSPTRG00000012620	SSB	86	99.130	Pan_troglodytes
ENSODEG00000010185	-	100	97.297	ENSPANG00000007440	SSB	85	99.130	Papio_anubis
ENSODEG00000010185	-	95	94.595	ENSPEMG00000021746	-	99	94.040	Peromyscus_maniculatus_bairdii
ENSODEG00000010185	-	83	82.171	ENSPCIG00000016333	-	92	82.171	Phascolarctos_cinereus
ENSODEG00000010185	-	99	94.022	ENSPCOG00000015741	-	92	92.241	Propithecus_coquereli
ENSODEG00000010185	-	82	82.237	ENSRBIG00000041232	-	88	80.576	Rhinopithecus_bieti
ENSODEG00000010185	-	94	92.466	ENSRBIG00000041972	SSB	88	99.130	Rhinopithecus_bieti
ENSODEG00000010185	-	100	97.297	ENSRROG00000040346	SSB	85	99.130	Rhinopithecus_roxellana
ENSODEG00000010185	-	94	82.119	ENSRROG00000031684	-	89	82.119	Rhinopithecus_roxellana
ENSODEG00000010185	-	100	98.378	ENSSBOG00000027204	SSB	86	99.130	Saimiri_boliviensis_boliviensis
ENSODEG00000010185	-	99	65.217	ENSTNIG00000000915	ssb	51	65.217	Tetraodon_nigroviridis
ENSODEG00000010185	-	99	60.326	ENSXCOG00000019109	ssb	93	61.719	Xiphophorus_couchianus