EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000010262 (Gene tree)
Gene ID: 101564362
Gene Symbol: CHD5
Alias: -
Full Name: chromodomain helicase DNA binding protein 5
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 41593 bases
Position: chrJH651628.1:3619184-3660776
Accession: 101564362
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000013880	ResIII	PF04851.15	6.2e-08	1	1
ENSODEP00000013879	ResIII	PF04851.15	7.6e-08	1	1
ENSODEP00000013877	ResIII	PF04851.15	7.7e-08	1	1
ENSODEP00000013878	ResIII	PF04851.15	8.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000014063	CHD5-204	5670	-	ENSODEP00000013880	1889 (aa)	-	-
ENSODET00000014062	CHD5-203	5781	XM_004639707	ENSODEP00000013879	1926 (aa)	XP_023555311	-
ENSODET00000014061	CHD5-202	6120	-	ENSODEP00000013878	2039 (aa)	-	-
ENSODET00000014060	CHD5-201	5817	-	ENSODEP00000013877	1938 (aa)	-	-

Gene Model

Click here to download ENSODEG00000010262's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000010262's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000010262	CHD5	92	72.804	ENSODEG00000003114	-	95	72.063
ENSODEG00000010262	CHD5	99	69.369	ENSODEG00000017785	CHD3	95	69.554

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000010262	CHD5	99	95.374	ENSG00000116254	CHD5	99	95.381	Homo_sapiens
ENSODEG00000010262	CHD5	99	94.496	ENSAMEG00000009880	CHD5	99	94.496	Ailuropoda_melanoleuca
ENSODEG00000010262	CHD5	95	78.867	ENSACIG00000012582	chd5	98	79.109	Amphilophus_citrinellus
ENSODEG00000010262	CHD5	95	79.880	ENSAOCG00000020356	chd5	90	79.858	Amphiprion_ocellaris
ENSODEG00000010262	CHD5	96	81.872	ENSAPLG00000015475	CHD5	98	82.078	Anas_platyrhynchos
ENSODEG00000010262	CHD5	97	84.144	ENSACAG00000002441	CHD5	96	83.827	Anolis_carolinensis
ENSODEG00000010262	CHD5	88	95.269	ENSANAG00000001078	CHD5	91	95.269	Aotus_nancymaae
ENSODEG00000010262	CHD5	95	75.883	ENSACLG00000003012	chd5	96	75.799	Astatotilapia_calliptera
ENSODEG00000010262	CHD5	92	77.873	ENSAMXG00000008921	chd5	99	77.456	Astyanax_mexicanus
ENSODEG00000010262	CHD5	94	95.820	ENSBTAG00000040477	CHD5	100	95.820	Bos_taurus
ENSODEG00000010262	CHD5	99	95.166	ENSCJAG00000000101	CHD5	99	95.174	Callithrix_jacchus
ENSODEG00000010262	CHD5	94	95.762	ENSCAFG00000019545	CHD5	100	95.762	Canis_familiaris
ENSODEG00000010262	CHD5	99	95.332	ENSCAFG00020008689	CHD5	98	93.734	Canis_lupus_dingo
ENSODEG00000010262	CHD5	99	94.283	ENSCHIG00000015027	CHD5	98	93.170	Capra_hircus
ENSODEG00000010262	CHD5	99	90.201	ENSTSYG00000033991	CHD5	99	90.185	Carlito_syrichta
ENSODEG00000010262	CHD5	100	97.143	ENSCAPG00000009294	CHD5	100	97.143	Cavia_aperea
ENSODEG00000010262	CHD5	100	97.143	ENSCPOG00000025080	CHD5	100	97.143	Cavia_porcellus
ENSODEG00000010262	CHD5	99	95.166	ENSCCAG00000024756	CHD5	99	95.174	Cebus_capucinus
ENSODEG00000010262	CHD5	99	94.491	ENSCATG00000043011	CHD5	99	94.499	Cercocebus_atys
ENSODEG00000010262	CHD5	100	98.042	ENSCLAG00000010589	CHD5	100	98.042	Chinchilla_lanigera
ENSODEG00000010262	CHD5	99	95.530	ENSCSAG00000000733	CHD5	99	95.537	Chlorocebus_sabaeus
ENSODEG00000010262	CHD5	94	90.620	ENSCPBG00000019363	CHD5	100	90.510	Chrysemys_picta_bellii
ENSODEG00000010262	CHD5	100	95.537	ENSCANG00000032302	CHD5	99	95.537	Colobus_angolensis_palliatus
ENSODEG00000010262	CHD5	56	96.981	ENSCGRG00001011042	Chd5	100	96.981	Cricetulus_griseus_chok1gshd
ENSODEG00000010262	CHD5	100	94.815	ENSCGRG00000011341	Chd5	100	94.233	Cricetulus_griseus_crigri
ENSODEG00000010262	CHD5	95	67.582	ENSDARG00000025789	chd4b	93	68.966	Danio_rerio
ENSODEG00000010262	CHD5	98	78.875	ENSDARG00000105083	chd5	97	81.197	Danio_rerio
ENSODEG00000010262	CHD5	100	90.348	ENSDNOG00000046342	CHD5	99	90.244	Dasypus_novemcinctus
ENSODEG00000010262	CHD5	100	95.402	ENSDORG00000005923	Chd5	100	95.402	Dipodomys_ordii
ENSODEG00000010262	CHD5	99	93.889	ENSEASG00005021464	CHD5	96	95.370	Equus_asinus_asinus
ENSODEG00000010262	CHD5	99	93.224	ENSECAG00000025043	CHD5	98	96.414	Equus_caballus
ENSODEG00000010262	CHD5	78	98.605	ENSEEUG00000002772	CHD5	77	98.605	Erinaceus_europaeus
ENSODEG00000010262	CHD5	95	77.414	ENSELUG00000010742	chd5	95	78.125	Esox_lucius
ENSODEG00000010262	CHD5	99	94.904	ENSFCAG00000006319	CHD5	99	94.811	Felis_catus
ENSODEG00000010262	CHD5	99	88.320	ENSFALG00000009740	CHD5	99	87.907	Ficedula_albicollis
ENSODEG00000010262	CHD5	99	96.935	ENSFDAG00000012881	CHD5	98	95.986	Fukomys_damarensis
ENSODEG00000010262	CHD5	100	88.412	ENSGALG00000000747	CHD5	99	88.025	Gallus_gallus
ENSODEG00000010262	CHD5	57	82.797	ENSGACG00000004389	chd5	93	82.981	Gasterosteus_aculeatus
ENSODEG00000010262	CHD5	97	87.387	ENSGAGG00000001590	CHD5	99	95.652	Gopherus_agassizii
ENSODEG00000010262	CHD5	100	95.278	ENSGGOG00000000708	CHD5	100	95.278	Gorilla_gorilla
ENSODEG00000010262	CHD5	95	76.636	ENSHBUG00000013453	chd5	96	76.526	Haplochromis_burtoni
ENSODEG00000010262	CHD5	100	96.667	ENSHGLG00000018184	CHD5	100	96.702	Heterocephalus_glaber_female
ENSODEG00000010262	CHD5	100	89.995	ENSHGLG00100013261	CHD5	99	89.188	Heterocephalus_glaber_male
ENSODEG00000010262	CHD5	95	78.658	ENSIPUG00000005446	chd5	98	78.773	Ictalurus_punctatus
ENSODEG00000010262	CHD5	100	95.714	ENSSTOG00000002778	CHD5	100	96.296	Ictidomys_tridecemlineatus
ENSODEG00000010262	CHD5	99	95.228	ENSJJAG00000019072	Chd5	99	94.653	Jaculus_jaculus
ENSODEG00000010262	CHD5	98	82.473	ENSLOCG00000004944	chd5	94	82.948	Lepisosteus_oculatus
ENSODEG00000010262	CHD5	99	95.636	ENSLAFG00000006348	CHD5	99	95.636	Loxodonta_africana
ENSODEG00000010262	CHD5	100	95.589	ENSMFAG00000033993	CHD5	100	95.817	Macaca_fascicularis
ENSODEG00000010262	CHD5	100	95.485	ENSMMUG00000016838	CHD5	99	95.485	Macaca_mulatta
ENSODEG00000010262	CHD5	99	95.582	ENSMNEG00000040044	CHD5	99	95.589	Macaca_nemestrina
ENSODEG00000010262	CHD5	100	92.217	ENSMLEG00000039166	CHD5	100	92.217	Mandrillus_leucophaeus
ENSODEG00000010262	CHD5	90	81.597	ENSMZEG00005000841	chd5	92	81.389	Maylandia_zebra
ENSODEG00000010262	CHD5	99	87.946	ENSMGAG00000001055	CHD5	99	87.998	Meleagris_gallopavo
ENSODEG00000010262	CHD5	99	91.424	ENSMICG00000017862	CHD5	99	94.566	Microcebus_murinus
ENSODEG00000010262	CHD5	99	94.703	ENSMOCG00000011049	Chd5	99	94.133	Microtus_ochrogaster
ENSODEG00000010262	CHD5	92	80.154	ENSMODG00000006294	CHD5	78	94.457	Monodelphis_domestica
ENSODEG00000010262	CHD5	95	79.137	ENSMALG00000002831	chd5	96	78.156	Monopterus_albus
ENSODEG00000010262	CHD5	99	94.439	MGP_CAROLIEiJ_G0026857	Chd5	99	94.444	Mus_caroli
ENSODEG00000010262	CHD5	99	94.180	ENSMUSG00000005045	Chd5	99	94.080	Mus_musculus
ENSODEG00000010262	CHD5	99	94.489	MGP_PahariEiJ_G0029205	Chd5	99	94.494	Mus_pahari
ENSODEG00000010262	CHD5	99	94.436	MGP_SPRETEiJ_G0027850	Chd5	99	94.442	Mus_spretus
ENSODEG00000010262	CHD5	100	91.142	ENSMPUG00000007122	CHD5	99	91.746	Mustela_putorius_furo
ENSODEG00000010262	CHD5	99	94.231	ENSNGAG00000019812	Chd5	99	93.128	Nannospalax_galili
ENSODEG00000010262	CHD5	100	93.046	ENSNLEG00000010320	CHD5	100	92.839	Nomascus_leucogenys
ENSODEG00000010262	CHD5	88	88.973	ENSOPRG00000004304	CHD5	87	88.889	Ochotona_princeps
ENSODEG00000010262	CHD5	95	78.049	ENSONIG00000000619	chd5	93	77.898	Oreochromis_niloticus
ENSODEG00000010262	CHD5	97	72.890	ENSOANG00000001819	CHD5	98	72.789	Ornithorhynchus_anatinus
ENSODEG00000010262	CHD5	99	92.616	ENSOGAG00000005703	CHD5	99	93.250	Otolemur_garnettii
ENSODEG00000010262	CHD5	98	94.283	ENSOARG00000013425	CHD5	98	94.283	Ovis_aries
ENSODEG00000010262	CHD5	100	95.280	ENSPPAG00000034048	CHD5	100	95.280	Pan_paniscus
ENSODEG00000010262	CHD5	99	94.332	ENSPPRG00000009453	CHD5	99	94.240	Panthera_pardus
ENSODEG00000010262	CHD5	100	87.423	ENSPTIG00000013926	CHD5	99	87.340	Panthera_tigris_altaica
ENSODEG00000010262	CHD5	99	95.273	ENSPTRG00000000075	CHD5	99	95.280	Pan_troglodytes
ENSODEG00000010262	CHD5	99	95.582	ENSPANG00000006765	CHD5	99	95.589	Papio_anubis
ENSODEG00000010262	CHD5	93	79.651	ENSPKIG00000004282	chd5	98	78.325	Paramormyrops_kingsleyae
ENSODEG00000010262	CHD5	97	82.836	ENSPSIG00000006414	CHD5	100	82.998	Pelodiscus_sinensis
ENSODEG00000010262	CHD5	69	96.522	ENSPEMG00000014799	Chd5	100	96.522	Peromyscus_maniculatus_bairdii
ENSODEG00000010262	CHD5	100	91.262	ENSPCIG00000028310	CHD5	97	90.848	Phascolarctos_cinereus
ENSODEG00000010262	CHD5	95	77.432	ENSPLAG00000005343	chd5	92	85.000	Poecilia_latipinna
ENSODEG00000010262	CHD5	97	96.239	ENSPPYG00000001952	CHD5	100	91.697	Pongo_abelii
ENSODEG00000010262	CHD5	99	94.958	ENSPCOG00000022930	CHD5	99	95.589	Propithecus_coquereli
ENSODEG00000010262	CHD5	95	78.110	ENSPNYG00000003183	chd5	98	78.201	Pundamilia_nyererei
ENSODEG00000010262	CHD5	100	94.447	ENSRNOG00000011268	Chd5	99	93.925	Rattus_norvegicus
ENSODEG00000010262	CHD5	95	96.606	ENSRBIG00000032140	CHD5	95	96.606	Rhinopithecus_bieti
ENSODEG00000010262	CHD5	100	95.330	ENSRROG00000041146	CHD5	99	95.330	Rhinopithecus_roxellana
ENSODEG00000010262	CHD5	100	90.886	ENSSBOG00000001955	CHD5	99	95.595	Saimiri_boliviensis_boliviensis
ENSODEG00000010262	CHD5	98	86.008	ENSSHAG00000018641	CHD5	99	85.903	Sarcophilus_harrisii
ENSODEG00000010262	CHD5	89	88.841	ENSSFOG00015006296	chd5	91	88.235	Scleropages_formosus
ENSODEG00000010262	CHD5	95	78.939	ENSSDUG00000017526	chd5	93	86.066	Seriola_dumerili
ENSODEG00000010262	CHD5	98	81.632	ENSSPUG00000010622	CHD5	98	80.717	Sphenodon_punctatus
ENSODEG00000010262	CHD5	98	95.382	ENSSSCG00000003366	CHD5	100	95.652	Sus_scrofa
ENSODEG00000010262	CHD5	94	84.904	ENSTGUG00000002634	-	100	84.682	Taeniopygia_guttata
ENSODEG00000010262	CHD5	54	80.705	ENSTNIG00000004346	chd5	99	81.139	Tetraodon_nigroviridis
ENSODEG00000010262	CHD5	99	94.027	ENSTTRG00000010468	CHD5	99	94.053	Tursiops_truncatus
ENSODEG00000010262	CHD5	99	95.288	ENSUAMG00000024509	CHD5	99	94.615	Ursus_americanus
ENSODEG00000010262	CHD5	99	90.204	ENSUMAG00000024173	CHD5	98	91.396	Ursus_maritimus
ENSODEG00000010262	CHD5	99	94.277	ENSVVUG00000026480	CHD5	98	94.277	Vulpes_vulpes
ENSODEG00000010262	CHD5	98	80.471	ENSXETG00000002904	chd5	100	80.053	Xenopus_tropicalis
ENSODEG00000010262	CHD5	58	83.871	ENSXCOG00000014202	chd5	95	83.871	Xiphophorus_couchianus