EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000010323 (Gene tree)
Gene ID: 101581935
Gene Symbol: TRMT1
Alias: -
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 9495 bases
Position: chrJH651588.1:1360895-1370389
Accession: 101581935
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000013971	zf-CCCH	PF00642.24	6.5e-06	1	1
ENSODEP00000013971	TRM	PF02005.16	5e-148	1	1
ENSODEP00000013971	Met_10	PF02475.16	7.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000014155	TRMT1-201	1993	XM_004635637	ENSODEP00000013971	657 (aa)	XP_004635694	UPI00033369B2

Gene Model

Click here to download ENSODEG00000010323's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000010323's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000010323	TRMT1	97	86.656	ENSG00000104907	TRMT1	100	91.623	Homo_sapiens
ENSODEG00000010323	TRMT1	99	84.202	ENSAMEG00000012598	TRMT1	97	84.202	Ailuropoda_melanoleuca
ENSODEG00000010323	TRMT1	88	58.433	ENSACIG00000018680	trmt1	90	58.433	Amphilophus_citrinellus
ENSODEG00000010323	TRMT1	88	66.034	ENSAOCG00000006781	trmt1	86	66.034	Amphiprion_ocellaris
ENSODEG00000010323	TRMT1	88	65.744	ENSAPEG00000007712	trmt1	86	65.744	Amphiprion_percula
ENSODEG00000010323	TRMT1	87	68.118	ENSATEG00000001872	trmt1	84	68.118	Anabas_testudineus
ENSODEG00000010323	TRMT1	87	68.651	ENSACAG00000003825	TRMT1	92	68.651	Anolis_carolinensis
ENSODEG00000010323	TRMT1	99	80.916	ENSANAG00000023016	TRMT1	99	83.522	Aotus_nancymaae
ENSODEG00000010323	TRMT1	91	62.645	ENSACLG00000010073	trmt1	97	62.645	Astatotilapia_calliptera
ENSODEG00000010323	TRMT1	87	67.304	ENSAMXG00000012026	trmt1	85	67.304	Astyanax_mexicanus
ENSODEG00000010323	TRMT1	99	83.792	ENSBTAG00000019325	TRMT1	93	83.792	Bos_taurus
ENSODEG00000010323	TRMT1	82	41.133	WBGene00006613	trm-1	97	41.133	Caenorhabditis_elegans
ENSODEG00000010323	TRMT1	98	81.260	ENSCJAG00000004566	TRMT1	99	81.260	Callithrix_jacchus
ENSODEG00000010323	TRMT1	99	85.276	ENSCAFG00000017070	TRMT1	98	86.443	Canis_familiaris
ENSODEG00000010323	TRMT1	99	84.509	ENSCAFG00020005397	TRMT1	98	81.902	Canis_lupus_dingo
ENSODEG00000010323	TRMT1	99	83.817	ENSCHIG00000013569	TRMT1	99	83.817	Capra_hircus
ENSODEG00000010323	TRMT1	97	80.685	ENSTSYG00000003207	TRMT1	98	80.371	Carlito_syrichta
ENSODEG00000010323	TRMT1	85	83.779	ENSCAPG00000003355	TRMT1	99	83.779	Cavia_aperea
ENSODEG00000010323	TRMT1	99	86.544	ENSCPOG00000011754	TRMT1	99	86.544	Cavia_porcellus
ENSODEG00000010323	TRMT1	95	82.720	ENSCCAG00000022263	TRMT1	99	82.982	Cebus_capucinus
ENSODEG00000010323	TRMT1	99	85.452	ENSCATG00000039850	TRMT1	99	85.452	Cercocebus_atys
ENSODEG00000010323	TRMT1	87	69.919	ENSCATG00000038220	-	98	69.919	Cercocebus_atys
ENSODEG00000010323	TRMT1	98	91.654	ENSCLAG00000015295	TRMT1	96	91.654	Chinchilla_lanigera
ENSODEG00000010323	TRMT1	81	86.981	ENSCSAG00000006500	TRMT1	100	86.981	Chlorocebus_sabaeus
ENSODEG00000010323	TRMT1	89	69.402	ENSCPBG00000023866	TRMT1	87	69.573	Chrysemys_picta_bellii
ENSODEG00000010323	TRMT1	86	46.048	ENSCING00000002884	-	99	46.048	Ciona_intestinalis
ENSODEG00000010323	TRMT1	83	46.751	ENSCSAVG00000010927	-	100	47.212	Ciona_savignyi
ENSODEG00000010323	TRMT1	95	66.029	ENSCANG00000031650	-	96	66.032	Colobus_angolensis_palliatus
ENSODEG00000010323	TRMT1	97	69.147	ENSCANG00000040631	TRMT1	98	69.147	Colobus_angolensis_palliatus
ENSODEG00000010323	TRMT1	99	81.818	ENSCGRG00001022594	Trmt1	98	81.818	Cricetulus_griseus_chok1gshd
ENSODEG00000010323	TRMT1	99	81.818	ENSCGRG00000017732	Trmt1	98	81.818	Cricetulus_griseus_crigri
ENSODEG00000010323	TRMT1	87	65.088	ENSCSEG00000001643	trmt1	84	66.862	Cynoglossus_semilaevis
ENSODEG00000010323	TRMT1	87	67.188	ENSCVAG00000011886	trmt1	86	67.188	Cyprinodon_variegatus
ENSODEG00000010323	TRMT1	87	64.940	ENSDARG00000010978	trmt1	85	65.060	Danio_rerio
ENSODEG00000010323	TRMT1	83	58.439	ENSDNOG00000048240	-	94	58.439	Dasypus_novemcinctus
ENSODEG00000010323	TRMT1	98	79.635	ENSDORG00000014298	Trmt1	99	79.635	Dipodomys_ordii
ENSODEG00000010323	TRMT1	82	47.628	FBgn0032430	CG6388	92	47.628	Drosophila_melanogaster
ENSODEG00000010323	TRMT1	54	80.000	ENSETEG00000015483	-	55	80.000	Echinops_telfairi
ENSODEG00000010323	TRMT1	79	53.861	ENSEBUG00000003449	trmt1	75	53.935	Eptatretus_burgeri
ENSODEG00000010323	TRMT1	94	84.355	ENSEASG00005004050	TRMT1	98	83.892	Equus_asinus_asinus
ENSODEG00000010323	TRMT1	94	84.677	ENSECAG00000016149	TRMT1	98	84.211	Equus_caballus
ENSODEG00000010323	TRMT1	51	85.317	ENSEEUG00000014102	-	84	85.317	Erinaceus_europaeus
ENSODEG00000010323	TRMT1	87	65.285	ENSELUG00000021659	trmt1	85	65.285	Esox_lucius
ENSODEG00000010323	TRMT1	98	84.651	ENSFCAG00000000483	TRMT1	98	84.651	Felis_catus
ENSODEG00000010323	TRMT1	98	88.390	ENSFDAG00000007386	TRMT1	98	88.390	Fukomys_damarensis
ENSODEG00000010323	TRMT1	87	65.458	ENSFHEG00000012865	trmt1	89	68.843	Fundulus_heteroclitus
ENSODEG00000010323	TRMT1	87	60.351	ENSGMOG00000006564	trmt1	98	60.351	Gadus_morhua
ENSODEG00000010323	TRMT1	87	67.601	ENSGAFG00000011862	trmt1	88	67.601	Gambusia_affinis
ENSODEG00000010323	TRMT1	87	63.287	ENSGACG00000000227	trmt1	91	63.763	Gasterosteus_aculeatus
ENSODEG00000010323	TRMT1	93	68.144	ENSGAGG00000016432	TRMT1	88	68.144	Gopherus_agassizii
ENSODEG00000010323	TRMT1	97	86.427	ENSGGOG00000014007	TRMT1	98	86.335	Gorilla_gorilla
ENSODEG00000010323	TRMT1	88	58.204	ENSHBUG00000008821	trmt1	94	58.204	Haplochromis_burtoni
ENSODEG00000010323	TRMT1	100	90.107	ENSHGLG00000015972	TRMT1	100	90.107	Heterocephalus_glaber_female
ENSODEG00000010323	TRMT1	100	83.435	ENSHGLG00100018112	TRMT1	100	83.435	Heterocephalus_glaber_male
ENSODEG00000010323	TRMT1	87	63.684	ENSHCOG00000009447	trmt1	88	63.684	Hippocampus_comes
ENSODEG00000010323	TRMT1	88	65.488	ENSIPUG00000002899	trmt1	86	65.825	Ictalurus_punctatus
ENSODEG00000010323	TRMT1	99	85.015	ENSSTOG00000012531	TRMT1	99	85.015	Ictidomys_tridecemlineatus
ENSODEG00000010323	TRMT1	95	83.280	ENSJJAG00000017154	Trmt1	98	81.442	Jaculus_jaculus
ENSODEG00000010323	TRMT1	90	65.604	ENSKMAG00000011809	trmt1	97	65.180	Kryptolebias_marmoratus
ENSODEG00000010323	TRMT1	87	65.965	ENSLBEG00000012703	trmt1	84	65.965	Labrus_bergylta
ENSODEG00000010323	TRMT1	87	57.986	ENSLACG00000014585	TRMT1	93	57.986	Latimeria_chalumnae
ENSODEG00000010323	TRMT1	87	62.607	ENSLOCG00000006479	trmt1	97	63.021	Lepisosteus_oculatus
ENSODEG00000010323	TRMT1	98	83.742	ENSLAFG00000014072	TRMT1	100	83.742	Loxodonta_africana
ENSODEG00000010323	TRMT1	99	85.299	ENSMFAG00000033143	TRMT1	99	85.299	Macaca_fascicularis
ENSODEG00000010323	TRMT1	98	79.444	ENSMMUG00000001167	TRMT1	99	79.444	Macaca_mulatta
ENSODEG00000010323	TRMT1	99	85.299	ENSMNEG00000037867	TRMT1	99	85.299	Macaca_nemestrina
ENSODEG00000010323	TRMT1	98	85.139	ENSMLEG00000016142	TRMT1	98	85.139	Mandrillus_leucophaeus
ENSODEG00000010323	TRMT1	87	67.193	ENSMAMG00000004357	trmt1	85	67.193	Mastacembelus_armatus
ENSODEG00000010323	TRMT1	92	62.097	ENSMZEG00005014510	trmt1	92	62.097	Maylandia_zebra
ENSODEG00000010323	TRMT1	98	81.550	ENSMAUG00000011134	Trmt1	98	81.040	Mesocricetus_auratus
ENSODEG00000010323	TRMT1	99	85.627	ENSMICG00000000793	TRMT1	99	85.627	Microcebus_murinus
ENSODEG00000010323	TRMT1	99	80.615	ENSMOCG00000015895	Trmt1	98	80.551	Microtus_ochrogaster
ENSODEG00000010323	TRMT1	87	65.614	ENSMMOG00000011097	trmt1	92	65.614	Mola_mola
ENSODEG00000010323	TRMT1	93	74.475	ENSMODG00000011619	TRMT1	100	74.475	Monodelphis_domestica
ENSODEG00000010323	TRMT1	99	81.442	MGP_CAROLIEiJ_G0031304	Trmt1	100	80.228	Mus_caroli
ENSODEG00000010323	TRMT1	99	80.982	ENSMUSG00000001909	Trmt1	100	79.848	Mus_musculus
ENSODEG00000010323	TRMT1	99	80.982	MGP_SPRETEiJ_G0032422	Trmt1	100	79.468	Mus_spretus
ENSODEG00000010323	TRMT1	99	84.299	ENSMPUG00000004210	TRMT1	93	84.299	Mustela_putorius_furo
ENSODEG00000010323	TRMT1	99	83.537	ENSMLUG00000012809	TRMT1	97	83.537	Myotis_lucifugus
ENSODEG00000010323	TRMT1	99	80.243	ENSNGAG00000022486	Trmt1	98	80.243	Nannospalax_galili
ENSODEG00000010323	TRMT1	75	68.862	ENSNBRG00000024376	trmt1	85	68.862	Neolamprologus_brichardi
ENSODEG00000010323	TRMT1	79	86.136	ENSNLEG00000013019	-	97	86.136	Nomascus_leucogenys
ENSODEG00000010323	TRMT1	90	74.747	ENSMEUG00000013756	TRMT1	99	74.747	Notamacropus_eugenii
ENSODEG00000010323	TRMT1	79	86.730	ENSOPRG00000009471	-	79	86.730	Ochotona_princeps
ENSODEG00000010323	TRMT1	94	64.687	ENSONIG00000000400	trmt1	99	64.687	Oreochromis_niloticus
ENSODEG00000010323	TRMT1	80	86.832	ENSOCUG00000021934	TRMT1	99	86.832	Oryctolagus_cuniculus
ENSODEG00000010323	TRMT1	89	61.409	ENSORLG00000020074	trmt1	94	61.093	Oryzias_latipes
ENSODEG00000010323	TRMT1	89	64.478	ENSORLG00020007561	trmt1	93	64.310	Oryzias_latipes_hni
ENSODEG00000010323	TRMT1	87	66.375	ENSORLG00015006547	trmt1	86	66.375	Oryzias_latipes_hsok
ENSODEG00000010323	TRMT1	92	63.328	ENSOMEG00000019343	trmt1	93	63.328	Oryzias_melastigma
ENSODEG00000010323	TRMT1	95	82.857	ENSOGAG00000025576	TRMT1	99	82.857	Otolemur_garnettii
ENSODEG00000010323	TRMT1	99	69.301	ENSOARG00000009397	TRMT1	93	69.605	Ovis_aries
ENSODEG00000010323	TRMT1	97	76.562	ENSPPRG00000012117	TRMT1	98	76.562	Panthera_pardus
ENSODEG00000010323	TRMT1	75	86.626	ENSPTIG00000008833	TRMT1	95	86.626	Panthera_tigris_altaica
ENSODEG00000010323	TRMT1	97	63.651	ENSPTRG00000050421	-	98	63.651	Pan_troglodytes
ENSODEG00000010323	TRMT1	96	87.066	ENSPTRG00000010557	TRMT1	98	86.180	Pan_troglodytes
ENSODEG00000010323	TRMT1	98	85.626	ENSPANG00000009247	TRMT1	98	85.626	Papio_anubis
ENSODEG00000010323	TRMT1	85	70.921	ENSPANG00000034058	-	94	70.921	Papio_anubis
ENSODEG00000010323	TRMT1	87	67.776	ENSPKIG00000005309	trmt1	84	67.776	Paramormyrops_kingsleyae
ENSODEG00000010323	TRMT1	85	60.498	ENSPSIG00000008762	TRMT1	80	60.498	Pelodiscus_sinensis
ENSODEG00000010323	TRMT1	87	66.140	ENSPMGG00000019764	trmt1	90	66.140	Periophthalmus_magnuspinnatus
ENSODEG00000010323	TRMT1	98	83.721	ENSPEMG00000016247	Trmt1	98	83.028	Peromyscus_maniculatus_bairdii
ENSODEG00000010323	TRMT1	94	57.327	ENSPMAG00000004329	trmt1	96	57.327	Petromyzon_marinus
ENSODEG00000010323	TRMT1	96	72.118	ENSPCIG00000019273	TRMT1	99	72.118	Phascolarctos_cinereus
ENSODEG00000010323	TRMT1	87	68.827	ENSPFOG00000008527	trmt1	88	68.827	Poecilia_formosa
ENSODEG00000010323	TRMT1	87	68.651	ENSPLAG00000018788	trmt1	87	70.986	Poecilia_latipinna
ENSODEG00000010323	TRMT1	87	68.651	ENSPMEG00000013120	trmt1	88	68.651	Poecilia_mexicana
ENSODEG00000010323	TRMT1	87	67.776	ENSPREG00000000211	trmt1	85	67.776	Poecilia_reticulata
ENSODEG00000010323	TRMT1	97	86.583	ENSPPYG00000009622	TRMT1	98	86.491	Pongo_abelii
ENSODEG00000010323	TRMT1	98	78.140	ENSPCAG00000003698	TRMT1	99	78.140	Procavia_capensis
ENSODEG00000010323	TRMT1	98	85.271	ENSPCOG00000008653	TRMT1	98	85.271	Propithecus_coquereli
ENSODEG00000010323	TRMT1	98	84.031	ENSPVAG00000015076	TRMT1	98	84.031	Pteropus_vampyrus
ENSODEG00000010323	TRMT1	91	61.653	ENSPNYG00000013960	trmt1	97	61.653	Pundamilia_nyererei
ENSODEG00000010323	TRMT1	80	68.201	ENSPNAG00000024859	trmt1	88	68.201	Pygocentrus_nattereri
ENSODEG00000010323	TRMT1	96	81.546	ENSRNOG00000002914	Trmt1	99	81.546	Rattus_norvegicus
ENSODEG00000010323	TRMT1	95	66.455	ENSRBIG00000037505	-	97	66.456	Rhinopithecus_bieti
ENSODEG00000010323	TRMT1	99	85.145	ENSRBIG00000038324	TRMT1	99	85.145	Rhinopithecus_bieti
ENSODEG00000010323	TRMT1	95	65.660	ENSRROG00000031847	-	96	65.665	Rhinopithecus_roxellana
ENSODEG00000010323	TRMT1	99	85.299	ENSRROG00000028599	TRMT1	99	85.299	Rhinopithecus_roxellana
ENSODEG00000010323	TRMT1	83	35.702	YDR120C	-	98	36.222	Saccharomyces_cerevisiae
ENSODEG00000010323	TRMT1	95	83.840	ENSSBOG00000028861	TRMT1	99	83.630	Saimiri_boliviensis_boliviensis
ENSODEG00000010323	TRMT1	89	77.358	ENSSHAG00000014381	TRMT1	96	76.134	Sarcophilus_harrisii
ENSODEG00000010323	TRMT1	89	65.821	ENSSFOG00015004139	trmt1	86	65.821	Scleropages_formosus
ENSODEG00000010323	TRMT1	87	67.596	ENSSMAG00000021136	trmt1	85	67.596	Scophthalmus_maximus
ENSODEG00000010323	TRMT1	87	66.783	ENSSDUG00000012740	trmt1	84	66.783	Seriola_dumerili
ENSODEG00000010323	TRMT1	87	66.435	ENSSLDG00000005971	trmt1	84	66.435	Seriola_lalandi_dorsalis
ENSODEG00000010323	TRMT1	86	82.218	ENSSARG00000005138	TRMT1	100	82.218	Sorex_araneus
ENSODEG00000010323	TRMT1	87	54.514	ENSSPUG00000001084	TRMT1	89	55.208	Sphenodon_punctatus
ENSODEG00000010323	TRMT1	91	62.645	ENSSPAG00000007153	trmt1	98	62.521	Stegastes_partitus
ENSODEG00000010323	TRMT1	95	85.737	ENSSSCG00000013744	TRMT1	98	85.737	Sus_scrofa
ENSODEG00000010323	TRMT1	90	60.833	ENSTRUG00000010700	trmt1	89	61.333	Takifugu_rubripes
ENSODEG00000010323	TRMT1	87	65.499	ENSTNIG00000018808	trmt1	97	65.499	Tetraodon_nigroviridis
ENSODEG00000010323	TRMT1	97	81.690	ENSTTRG00000006379	TRMT1	98	81.636	Tursiops_truncatus
ENSODEG00000010323	TRMT1	97	84.867	ENSUAMG00000022911	TRMT1	98	84.867	Ursus_americanus
ENSODEG00000010323	TRMT1	95	84.848	ENSUMAG00000006027	TRMT1	98	84.848	Ursus_maritimus
ENSODEG00000010323	TRMT1	99	85.429	ENSVVUG00000024177	TRMT1	98	85.429	Vulpes_vulpes
ENSODEG00000010323	TRMT1	71	70.690	ENSXETG00000033863	TRMT1	92	70.690	Xenopus_tropicalis
ENSODEG00000010323	TRMT1	87	68.126	ENSXCOG00000015733	trmt1	88	68.126	Xiphophorus_couchianus
ENSODEG00000010323	TRMT1	87	67.776	ENSXMAG00000013823	trmt1	97	67.776	Xiphophorus_maculatus