EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000010390 (Gene tree)
Gene ID: 101579552
Gene Symbol: SMG7
Alias: C1orf16|EST1C|KIAA0250|SGA56M|SMG-7
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 80473 bases
Position: chrJH651788.1:801828-882300
Accession: 101579552
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000014063	EST1	PF10374.9	4.5e-25	1	1
ENSODEP00000014062	EST1	PF10374.9	5.2e-25	1	1
ENSODEP00000014064	EST1	PF10374.9	5.3e-25	1	1
ENSODEP00000014063	EST1_DNA_bind	PF10373.9	6.8e-56	1	1
ENSODEP00000014062	EST1_DNA_bind	PF10373.9	6.8e-56	1	1
ENSODEP00000014064	EST1_DNA_bind	PF10373.9	6.9e-56	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000014248	SMG7-203	3450	-	ENSODEP00000014064	1149 (aa)	-	-
ENSODET00000014247	SMG7-202	3414	XM_012512771	ENSODEP00000014063	1137 (aa)	-	-
ENSODET00000014246	SMG7-201	3704	XM_004646592	ENSODEP00000014062	1141 (aa)	XP_004646650	UPI0003336613

Gene Model

Click here to download ENSODEG00000010390's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000010390's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000010390	SMG7	100	97.302	ENSG00000116698	SMG7	100	98.148	Homo_sapiens
ENSODEG00000010390	SMG7	89	73.653	ENSAPOG00000009611	smg7	95	74.281	Acanthochromis_polyacanthus
ENSODEG00000010390	SMG7	99	95.306	ENSAMEG00000002357	SMG7	99	95.217	Ailuropoda_melanoleuca
ENSODEG00000010390	SMG7	97	63.725	ENSACIG00000015152	smg7	98	67.580	Amphilophus_citrinellus
ENSODEG00000010390	SMG7	99	65.954	ENSAOCG00000013538	smg7	99	66.496	Amphiprion_ocellaris
ENSODEG00000010390	SMG7	99	65.812	ENSAPEG00000007851	smg7	99	66.354	Amphiprion_percula
ENSODEG00000010390	SMG7	99	65.705	ENSATEG00000006931	smg7	99	66.214	Anabas_testudineus
ENSODEG00000010390	SMG7	100	88.189	ENSAPLG00000015811	SMG7	100	88.189	Anas_platyrhynchos
ENSODEG00000010390	SMG7	100	83.876	ENSACAG00000014989	SMG7	100	84.211	Anolis_carolinensis
ENSODEG00000010390	SMG7	100	96.834	ENSANAG00000028114	SMG7	100	96.834	Aotus_nancymaae
ENSODEG00000010390	SMG7	99	64.911	ENSACLG00000022079	smg7	99	65.979	Astatotilapia_calliptera
ENSODEG00000010390	SMG7	99	67.739	ENSAMXG00000020809	smg7	99	68.115	Astyanax_mexicanus
ENSODEG00000010390	SMG7	100	95.474	ENSBTAG00000008003	SMG7	100	94.987	Bos_taurus
ENSODEG00000010390	SMG7	100	96.867	ENSCJAG00000005135	SMG7	100	96.746	Callithrix_jacchus
ENSODEG00000010390	SMG7	100	96.432	ENSCAFG00000013276	SMG7	98	96.432	Canis_familiaris
ENSODEG00000010390	SMG7	100	96.432	ENSCAFG00020015475	SMG7	98	96.432	Canis_lupus_dingo
ENSODEG00000010390	SMG7	99	95.587	ENSCHIG00000018192	SMG7	99	95.587	Capra_hircus
ENSODEG00000010390	SMG7	100	96.432	ENSTSYG00000002667	SMG7	100	96.306	Carlito_syrichta
ENSODEG00000010390	SMG7	100	98.433	ENSCPOG00000008906	SMG7	99	98.433	Cavia_porcellus
ENSODEG00000010390	SMG7	100	97.010	ENSCCAG00000028596	SMG7	100	97.010	Cebus_capucinus
ENSODEG00000010390	SMG7	100	97.476	ENSCATG00000011063	SMG7	100	97.361	Cercocebus_atys
ENSODEG00000010390	SMG7	100	98.433	ENSCLAG00000010751	SMG7	100	98.433	Chinchilla_lanigera
ENSODEG00000010390	SMG7	100	97.302	ENSCSAG00000012654	SMG7	98	97.302	Chlorocebus_sabaeus
ENSODEG00000010390	SMG7	92	88.539	ENSCHOG00000010522	SMG7	93	88.921	Choloepus_hoffmanni
ENSODEG00000010390	SMG7	100	90.798	ENSCPBG00000015724	SMG7	100	90.798	Chrysemys_picta_bellii
ENSODEG00000010390	SMG7	99	97.252	ENSCANG00000015680	SMG7	99	97.252	Colobus_angolensis_palliatus
ENSODEG00000010390	SMG7	100	95.822	ENSCGRG00001013705	Smg7	100	95.793	Cricetulus_griseus_chok1gshd
ENSODEG00000010390	SMG7	100	95.822	ENSCGRG00000018401	Smg7	100	95.822	Cricetulus_griseus_crigri
ENSODEG00000010390	SMG7	95	68.000	ENSCVAG00000011842	smg7	100	64.089	Cyprinodon_variegatus
ENSODEG00000010390	SMG7	99	67.675	ENSDARG00000060767	smg7	99	67.761	Danio_rerio
ENSODEG00000010390	SMG7	100	95.909	ENSDORG00000007331	Smg7	100	95.909	Dipodomys_ordii
ENSODEG00000010390	SMG7	97	95.290	ENSETEG00000002654	SMG7	100	95.290	Echinops_telfairi
ENSODEG00000010390	SMG7	100	96.933	ENSEASG00005006524	SMG7	100	96.933	Equus_asinus_asinus
ENSODEG00000010390	SMG7	100	97.020	ENSECAG00000004313	SMG7	100	97.020	Equus_caballus
ENSODEG00000010390	SMG7	97	94.842	ENSEEUG00000002024	SMG7	94	94.842	Erinaceus_europaeus
ENSODEG00000010390	SMG7	99	65.017	ENSELUG00000010293	smg7	99	65.871	Esox_lucius
ENSODEG00000010390	SMG7	100	96.757	ENSFCAG00000010900	SMG7	100	97.008	Felis_catus
ENSODEG00000010390	SMG7	98	83.078	ENSFALG00000003047	SMG7	100	82.653	Ficedula_albicollis
ENSODEG00000010390	SMG7	99	97.191	ENSFDAG00000012121	SMG7	99	97.594	Fukomys_damarensis
ENSODEG00000010390	SMG7	99	64.267	ENSFHEG00000011073	smg7	99	64.726	Fundulus_heteroclitus
ENSODEG00000010390	SMG7	89	67.883	ENSGMOG00000004916	smg7	92	67.883	Gadus_morhua
ENSODEG00000010390	SMG7	100	88.462	ENSGALG00000004667	SMG7	100	88.374	Gallus_gallus
ENSODEG00000010390	SMG7	99	64.439	ENSGAFG00000019000	smg7	99	63.853	Gambusia_affinis
ENSODEG00000010390	SMG7	97	64.423	ENSGACG00000001634	smg7	99	64.978	Gasterosteus_aculeatus
ENSODEG00000010390	SMG7	100	97.215	ENSGGOG00000002342	SMG7	100	97.098	Gorilla_gorilla
ENSODEG00000010390	SMG7	99	64.575	ENSHBUG00000003726	smg7	97	72.081	Haplochromis_burtoni
ENSODEG00000010390	SMG7	100	97.537	ENSHGLG00000009353	SMG7	100	97.683	Heterocephalus_glaber_female
ENSODEG00000010390	SMG7	100	90.009	ENSHGLG00100004878	-	100	90.009	Heterocephalus_glaber_male
ENSODEG00000010390	SMG7	100	97.625	ENSHGLG00100009637	-	100	97.625	Heterocephalus_glaber_male
ENSODEG00000010390	SMG7	99	68.115	ENSIPUG00000016997	smg7	99	68.375	Ictalurus_punctatus
ENSODEG00000010390	SMG7	100	97.302	ENSSTOG00000000401	SMG7	100	97.302	Ictidomys_tridecemlineatus
ENSODEG00000010390	SMG7	100	95.092	ENSJJAG00000012351	Smg7	100	95.092	Jaculus_jaculus
ENSODEG00000010390	SMG7	97	62.072	ENSKMAG00000004900	smg7	100	62.162	Kryptolebias_marmoratus
ENSODEG00000010390	SMG7	99	65.919	ENSLBEG00000002983	smg7	99	66.091	Labrus_bergylta
ENSODEG00000010390	SMG7	52	62.833	ENSLBEG00000005220	-	75	64.623	Labrus_bergylta
ENSODEG00000010390	SMG7	99	75.260	ENSLACG00000000972	SMG7	99	75.413	Latimeria_chalumnae
ENSODEG00000010390	SMG7	99	67.391	ENSLOCG00000002010	smg7	99	67.809	Lepisosteus_oculatus
ENSODEG00000010390	SMG7	100	96.345	ENSLAFG00000008186	SMG7	100	96.345	Loxodonta_africana
ENSODEG00000010390	SMG7	100	97.389	ENSMFAG00000031653	SMG7	100	97.371	Macaca_fascicularis
ENSODEG00000010390	SMG7	100	97.476	ENSMMUG00000018458	SMG7	98	97.476	Macaca_mulatta
ENSODEG00000010390	SMG7	100	97.361	ENSMNEG00000034798	SMG7	100	97.361	Macaca_nemestrina
ENSODEG00000010390	SMG7	100	97.476	ENSMLEG00000037170	SMG7	100	97.361	Mandrillus_leucophaeus
ENSODEG00000010390	SMG7	88	65.150	ENSMAMG00000018733	smg7	85	65.377	Mastacembelus_armatus
ENSODEG00000010390	SMG7	99	65.385	ENSMZEG00005015247	smg7	99	65.893	Maylandia_zebra
ENSODEG00000010390	SMG7	97	88.230	ENSMGAG00000001561	SMG7	98	88.230	Meleagris_gallopavo
ENSODEG00000010390	SMG7	100	96.084	ENSMAUG00000019484	Smg7	100	96.084	Mesocricetus_auratus
ENSODEG00000010390	SMG7	100	97.041	ENSMICG00000007145	SMG7	100	97.041	Microcebus_murinus
ENSODEG00000010390	SMG7	100	96.084	ENSMOCG00000020748	Smg7	100	96.084	Microtus_ochrogaster
ENSODEG00000010390	SMG7	99	64.211	ENSMMOG00000001524	smg7	99	64.502	Mola_mola
ENSODEG00000010390	SMG7	92	92.315	ENSMODG00000007139	SMG7	99	92.315	Monodelphis_domestica
ENSODEG00000010390	SMG7	99	65.352	ENSMALG00000000061	smg7	93	67.980	Monopterus_albus
ENSODEG00000010390	SMG7	100	95.735	MGP_CAROLIEiJ_G0014704	Smg7	100	95.387	Mus_caroli
ENSODEG00000010390	SMG7	100	95.648	ENSMUSG00000042772	Smg7	100	95.648	Mus_musculus
ENSODEG00000010390	SMG7	100	95.648	MGP_PahariEiJ_G0027940	Smg7	100	95.648	Mus_pahari
ENSODEG00000010390	SMG7	100	95.735	MGP_SPRETEiJ_G0015511	Smg7	100	95.735	Mus_spretus
ENSODEG00000010390	SMG7	98	96.524	ENSMPUG00000011732	SMG7	97	96.524	Mustela_putorius_furo
ENSODEG00000010390	SMG7	99	95.852	ENSMLUG00000015417	SMG7	99	95.852	Myotis_lucifugus
ENSODEG00000010390	SMG7	100	96.084	ENSNGAG00000009836	Smg7	100	96.084	Nannospalax_galili
ENSODEG00000010390	SMG7	98	60.957	ENSNBRG00000024343	smg7	98	69.668	Neolamprologus_brichardi
ENSODEG00000010390	SMG7	100	97.476	ENSNLEG00000018018	SMG7	100	97.361	Nomascus_leucogenys
ENSODEG00000010390	SMG7	77	85.856	ENSMEUG00000004681	SMG7	73	91.870	Notamacropus_eugenii
ENSODEG00000010390	SMG7	96	84.475	ENSOPRG00000013942	SMG7	96	84.201	Ochotona_princeps
ENSODEG00000010390	SMG7	99	64.691	ENSONIG00000000277	smg7	99	65.582	Oreochromis_niloticus
ENSODEG00000010390	SMG7	98	90.337	ENSOANG00000000994	SMG7	100	90.337	Ornithorhynchus_anatinus
ENSODEG00000010390	SMG7	100	89.643	ENSOCUG00000005887	SMG7	94	89.817	Oryctolagus_cuniculus
ENSODEG00000010390	SMG7	99	64.107	ENSORLG00000007314	smg7	99	63.848	Oryzias_latipes
ENSODEG00000010390	SMG7	99	64.538	ENSORLG00020015779	smg7	99	64.280	Oryzias_latipes_hni
ENSODEG00000010390	SMG7	99	65.116	ENSORLG00015012289	smg7	99	63.972	Oryzias_latipes_hsok
ENSODEG00000010390	SMG7	99	63.062	ENSOMEG00000002328	smg7	99	63.062	Oryzias_melastigma
ENSODEG00000010390	SMG7	97	94.832	ENSOGAG00000003107	SMG7	94	94.742	Otolemur_garnettii
ENSODEG00000010390	SMG7	100	95.387	ENSOARG00000001352	SMG7	98	95.387	Ovis_aries
ENSODEG00000010390	SMG7	100	97.361	ENSPPAG00000031619	SMG7	100	97.361	Pan_paniscus
ENSODEG00000010390	SMG7	100	96.780	ENSPPRG00000011222	SMG7	100	96.658	Panthera_pardus
ENSODEG00000010390	SMG7	96	96.627	ENSPTIG00000007242	SMG7	100	92.838	Panthera_tigris_altaica
ENSODEG00000010390	SMG7	100	97.361	ENSPTRG00000001764	SMG7	100	97.361	Pan_troglodytes
ENSODEG00000010390	SMG7	100	97.476	ENSPANG00000004520	SMG7	100	97.361	Papio_anubis
ENSODEG00000010390	SMG7	99	64.561	ENSPKIG00000007242	smg7	99	68.812	Paramormyrops_kingsleyae
ENSODEG00000010390	SMG7	99	90.997	ENSPSIG00000012201	SMG7	99	90.909	Pelodiscus_sinensis
ENSODEG00000010390	SMG7	71	43.365	ENSPMGG00000021833	smg7	89	58.163	Periophthalmus_magnuspinnatus
ENSODEG00000010390	SMG7	100	94.778	ENSPEMG00000011315	Smg7	100	94.778	Peromyscus_maniculatus_bairdii
ENSODEG00000010390	SMG7	100	92.619	ENSPCIG00000003786	SMG7	100	92.619	Phascolarctos_cinereus
ENSODEG00000010390	SMG7	99	63.254	ENSPFOG00000019219	smg7	99	63.201	Poecilia_formosa
ENSODEG00000010390	SMG7	99	64.610	ENSPLAG00000001446	smg7	99	64.267	Poecilia_latipinna
ENSODEG00000010390	SMG7	96	64.071	ENSPMEG00000005218	smg7	99	63.717	Poecilia_mexicana
ENSODEG00000010390	SMG7	87	61.554	ENSPREG00000019039	smg7	91	61.591	Poecilia_reticulata
ENSODEG00000010390	SMG7	100	97.449	ENSPPYG00000000427	SMG7	100	97.449	Pongo_abelii
ENSODEG00000010390	SMG7	95	84.502	ENSPCAG00000008360	SMG7	94	84.502	Procavia_capensis
ENSODEG00000010390	SMG7	100	97.128	ENSPCOG00000011996	SMG7	98	97.128	Propithecus_coquereli
ENSODEG00000010390	SMG7	92	90.727	ENSPVAG00000000851	SMG7	89	91.058	Pteropus_vampyrus
ENSODEG00000010390	SMG7	99	65.464	ENSPNYG00000007643	smg7	99	65.749	Pundamilia_nyererei
ENSODEG00000010390	SMG7	99	68.107	ENSPNAG00000011374	smg7	98	71.717	Pygocentrus_nattereri
ENSODEG00000010390	SMG7	100	95.565	ENSRNOG00000027962	Smg7	100	96.296	Rattus_norvegicus
ENSODEG00000010390	SMG7	100	97.389	ENSRBIG00000036316	SMG7	100	97.274	Rhinopithecus_bieti
ENSODEG00000010390	SMG7	100	97.389	ENSRROG00000035719	SMG7	100	97.371	Rhinopithecus_roxellana
ENSODEG00000010390	SMG7	100	96.933	ENSSBOG00000023454	SMG7	100	96.933	Saimiri_boliviensis_boliviensis
ENSODEG00000010390	SMG7	100	92.186	ENSSHAG00000013147	SMG7	100	92.186	Sarcophilus_harrisii
ENSODEG00000010390	SMG7	99	68.848	ENSSFOG00015017252	smg7	99	75.263	Scleropages_formosus
ENSODEG00000010390	SMG7	99	64.711	ENSSMAG00000006067	smg7	99	65.547	Scophthalmus_maximus
ENSODEG00000010390	SMG7	95	71.905	ENSSDUG00000017543	smg7	99	65.596	Seriola_dumerili
ENSODEG00000010390	SMG7	99	89.223	ENSSPUG00000002064	SMG7	99	89.223	Sphenodon_punctatus
ENSODEG00000010390	SMG7	100	65.371	ENSSPAG00000008733	smg7	100	65.461	Stegastes_partitus
ENSODEG00000010390	SMG7	100	96.845	ENSSSCG00000015558	SMG7	100	96.845	Sus_scrofa
ENSODEG00000010390	SMG7	99	88.634	ENSTGUG00000003928	SMG7	100	88.634	Taeniopygia_guttata
ENSODEG00000010390	SMG7	99	63.873	ENSTNIG00000002802	smg7	99	63.835	Tetraodon_nigroviridis
ENSODEG00000010390	SMG7	77	93.644	ENSTBEG00000003220	SMG7	75	93.644	Tupaia_belangeri
ENSODEG00000010390	SMG7	96	96.347	ENSTTRG00000014778	SMG7	94	96.347	Tursiops_truncatus
ENSODEG00000010390	SMG7	96	92.511	ENSUAMG00000017473	SMG7	100	92.511	Ursus_americanus
ENSODEG00000010390	SMG7	96	96.542	ENSUMAG00000016389	SMG7	100	96.542	Ursus_maritimus
ENSODEG00000010390	SMG7	100	96.582	ENSVVUG00000008976	SMG7	100	96.893	Vulpes_vulpes
ENSODEG00000010390	SMG7	100	70.884	ENSXETG00000012528	smg7	100	70.859	Xenopus_tropicalis
ENSODEG00000010390	SMG7	99	64.378	ENSXMAG00000007123	smg7	99	64.378	Xiphophorus_maculatus