EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000010443 (Gene tree)
Gene ID: 101589297
Gene Symbol: -
Alias: -
Full Name: ras-related protein Rab-13
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 736 bases
Position: chrJH651591.1:4263746-4264481
Accession: 101589297
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000014128	MMR_HSR1	PF01926.23	2.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000014313	-	641	XM_004635858	ENSODEP00000014128	203 (aa)	XP_004635915	UPI0003338C0C

Gene Model

Click here to download ENSODEG00000010443's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000010443's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000010443	-	94	53.927	ENSODEG00000017847	-	92	53.927
ENSODEG00000010443	-	81	31.515	ENSODEG00000009963	RHEB	87	31.515
ENSODEG00000010443	-	78	43.038	ENSODEG00000005942	RAB6A	76	43.038
ENSODEG00000010443	-	95	37.379	ENSODEG00000012270	RAB34	80	37.379
ENSODEG00000010443	-	88	42.697	ENSODEG00000002013	RAB14	80	42.697
ENSODEG00000010443	-	63	30.935	ENSODEG00000006629	ARFRP1	68	30.935
ENSODEG00000010443	-	92	44.792	ENSODEG00000000520	RAB39B	90	44.792
ENSODEG00000010443	-	80	37.647	ENSODEG00000019004	RAB9A	83	37.647
ENSODEG00000010443	-	81	38.922	ENSODEG00000016056	RAB23	69	38.922
ENSODEG00000010443	-	82	51.786	ENSODEG00000006414	RAB12	87	48.168
ENSODEG00000010443	-	87	46.023	ENSODEG00000011371	RAB11B	81	46.023
ENSODEG00000010443	-	84	54.706	ENSODEG00000007219	RAB35	84	54.706
ENSODEG00000010443	-	85	43.353	ENSODEG00000009908	RAB25	81	43.353
ENSODEG00000010443	-	79	39.752	ENSODEG00000000054	RAB22A	83	39.752
ENSODEG00000010443	-	58	30.159	ENSODEG00000004758	-	53	30.159
ENSODEG00000010443	-	95	39.896	ENSODEG00000003860	RAB5B	89	39.896
ENSODEG00000010443	-	80	39.521	ENSODEG00000019065	-	87	39.521
ENSODEG00000010443	-	79	40.994	ENSODEG00000017920	RAB5C	75	40.994
ENSODEG00000010443	-	87	42.553	ENSODEG00000011726	RAB33A	79	42.553
ENSODEG00000010443	-	90	47.253	ENSODEG00000003833	RAB30	89	47.253
ENSODEG00000010443	-	91	52.717	ENSODEG00000013827	RAB15	86	52.717
ENSODEG00000010443	-	83	34.302	ENSODEG00000009994	RERG	84	34.302
ENSODEG00000010443	-	90	31.746	ENSODEG00000010425	RAB24	81	34.337
ENSODEG00000010443	-	92	50.265	ENSODEG00000011248	-	96	51.042
ENSODEG00000010443	-	82	48.795	ENSODEG00000016788	-	84	48.795
ENSODEG00000010443	-	79	36.810	ENSODEG00000018151	MRAS	78	36.810
ENSODEG00000010443	-	79	37.037	ENSODEG00000007937	NRAS	85	37.037
ENSODEG00000010443	-	89	35.165	ENSODEG00000015703	HRAS	95	35.165
ENSODEG00000010443	-	80	39.286	ENSODEG00000002594	-	60	39.286
ENSODEG00000010443	-	63	98.425	ENSODEG00000012634	-	100	98.425
ENSODEG00000010443	-	87	46.023	ENSODEG00000016878	-	81	46.023
ENSODEG00000010443	-	99	40.976	ENSODEG00000002979	RAB33B	88	40.976
ENSODEG00000010443	-	83	49.405	ENSODEG00000001343	RAB2B	78	49.405
ENSODEG00000010443	-	61	44.715	ENSODEG00000000290	-	83	44.715
ENSODEG00000010443	-	75	36.538	ENSODEG00000002835	RAB7A	96	36.538
ENSODEG00000010443	-	80	32.716	ENSODEG00000015650	-	71	32.716
ENSODEG00000010443	-	97	35.407	ENSODEG00000009016	RAB36	71	35.407
ENSODEG00000010443	-	67	30.882	ENSODEG00000011800	ARF5	72	30.882
ENSODEG00000010443	-	83	49.704	ENSODEG00000002369	-	80	49.704
ENSODEG00000010443	-	79	38.889	ENSODEG00000010412	KRAS	85	38.889
ENSODEG00000010443	-	82	43.713	ENSODEG00000004150	-	81	43.713

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000010443	-	100	89.655	ENSG00000143545	RAB13	100	89.655	Homo_sapiens
ENSODEG00000010443	-	95	77.083	ENSACIG00000008584	rab13	91	77.083	Amphilophus_citrinellus
ENSODEG00000010443	-	100	89.163	ENSANAG00000030247	-	100	89.163	Aotus_nancymaae
ENSODEG00000010443	-	99	77.723	ENSAMXG00000030712	rab13	99	77.723	Astyanax_mexicanus
ENSODEG00000010443	-	100	88.670	ENSBTAG00000017604	RAB13	100	88.670	Bos_taurus
ENSODEG00000010443	-	80	47.239	WBGene00019317	K02E10.1	75	47.239	Caenorhabditis_elegans
ENSODEG00000010443	-	100	88.177	ENSCJAG00000009933	-	100	88.177	Callithrix_jacchus
ENSODEG00000010443	-	100	88.670	ENSCHIG00000022271	-	100	88.670	Capra_hircus
ENSODEG00000010443	-	99	95.050	ENSCPOG00000011491	-	99	95.050	Cavia_porcellus
ENSODEG00000010443	-	100	89.163	ENSCCAG00000028502	-	100	89.163	Cebus_capucinus
ENSODEG00000010443	-	100	89.655	ENSCATG00000041779	-	100	89.655	Cercocebus_atys
ENSODEG00000010443	-	100	95.074	ENSCLAG00000006603	-	100	95.074	Chinchilla_lanigera
ENSODEG00000010443	-	100	89.655	ENSCANG00000036573	-	100	89.655	Colobus_angolensis_palliatus
ENSODEG00000010443	-	100	88.670	ENSCGRG00001021505	Rab13	100	88.670	Cricetulus_griseus_chok1gshd
ENSODEG00000010443	-	100	88.670	ENSCGRG00000012126	Rab13	100	88.670	Cricetulus_griseus_crigri
ENSODEG00000010443	-	99	75.980	ENSCSEG00000002358	rab13	99	75.980	Cynoglossus_semilaevis
ENSODEG00000010443	-	99	77.723	ENSDARG00000034771	rab13	99	77.723	Danio_rerio
ENSODEG00000010443	-	100	89.655	ENSDORG00000001591	Rab13	100	89.655	Dipodomys_ordii
ENSODEG00000010443	-	100	89.163	ENSEASG00005000683	-	100	89.163	Equus_asinus_asinus
ENSODEG00000010443	-	100	89.163	ENSECAG00000016551	RAB13	100	89.163	Equus_caballus
ENSODEG00000010443	-	99	85.149	ENSEEUG00000001233	-	99	85.149	Erinaceus_europaeus
ENSODEG00000010443	-	99	76.238	ENSELUG00000012801	rab13	99	76.238	Esox_lucius
ENSODEG00000010443	-	100	86.700	ENSFCAG00000045269	-	100	86.700	Felis_catus
ENSODEG00000010443	-	65	94.697	ENSFDAG00000014469	-	100	94.697	Fukomys_damarensis
ENSODEG00000010443	-	99	75.980	ENSFHEG00000021221	rab13	95	84.393	Fundulus_heteroclitus
ENSODEG00000010443	-	99	75.248	ENSGACG00000011925	rab13	99	75.248	Gasterosteus_aculeatus
ENSODEG00000010443	-	93	84.127	ENSGAGG00000000742	-	99	80.392	Gopherus_agassizii
ENSODEG00000010443	-	100	89.655	ENSGGOG00000023693	RAB13	100	89.655	Gorilla_gorilla
ENSODEG00000010443	-	100	91.133	ENSHGLG00000008749	RAB13	100	91.133	Heterocephalus_glaber_female
ENSODEG00000010443	-	100	91.133	ENSHGLG00100013608	RAB13	100	91.133	Heterocephalus_glaber_male
ENSODEG00000010443	-	99	72.772	ENSHCOG00000007440	rab13	97	83.523	Hippocampus_comes
ENSODEG00000010443	-	99	77.000	ENSIPUG00000003199	rab13	99	77.000	Ictalurus_punctatus
ENSODEG00000010443	-	100	90.148	ENSSTOG00000011222	-	100	90.148	Ictidomys_tridecemlineatus
ENSODEG00000010443	-	100	89.163	ENSJJAG00000010575	Rab13	100	89.163	Jaculus_jaculus
ENSODEG00000010443	-	99	75.248	ENSKMAG00000001908	rab13	99	75.248	Kryptolebias_marmoratus
ENSODEG00000010443	-	99	76.000	ENSLBEG00000026779	rab13	99	76.000	Labrus_bergylta
ENSODEG00000010443	-	88	74.157	ENSLACG00000008103	-	100	74.157	Latimeria_chalumnae
ENSODEG00000010443	-	100	89.655	ENSMFAG00000041018	RAB13	100	89.655	Macaca_fascicularis
ENSODEG00000010443	-	100	89.655	ENSMNEG00000028951	-	100	89.655	Macaca_nemestrina
ENSODEG00000010443	-	100	89.655	ENSMLEG00000042247	-	100	89.655	Mandrillus_leucophaeus
ENSODEG00000010443	-	99	74.752	ENSMAMG00000014602	rab13	99	74.752	Mastacembelus_armatus
ENSODEG00000010443	-	100	88.177	ENSMAUG00000015713	Rab13	100	88.177	Mesocricetus_auratus
ENSODEG00000010443	-	100	88.670	ENSMICG00000010340	-	100	88.670	Microcebus_murinus
ENSODEG00000010443	-	100	89.163	ENSMOCG00000021448	Rab13	100	89.163	Microtus_ochrogaster
ENSODEG00000010443	-	99	85.644	ENSMODG00000017295	-	84	85.644	Monodelphis_domestica
ENSODEG00000010443	-	100	87.192	MGP_CAROLIEiJ_G0025227	Rab13	100	87.192	Mus_caroli
ENSODEG00000010443	-	100	86.700	ENSMUSG00000027935	Rab13	100	86.700	Mus_musculus
ENSODEG00000010443	-	99	87.129	MGP_PahariEiJ_G0026671	Rab13	99	87.129	Mus_pahari
ENSODEG00000010443	-	100	88.177	ENSNGAG00000010309	Rab13	100	88.177	Nannospalax_galili
ENSODEG00000010443	-	99	75.743	ENSNBRG00000004124	rab13	99	75.743	Neolamprologus_brichardi
ENSODEG00000010443	-	100	89.655	ENSNLEG00000028944	-	100	89.655	Nomascus_leucogenys
ENSODEG00000010443	-	100	85.784	ENSMEUG00000009667	-	100	85.784	Notamacropus_eugenii
ENSODEG00000010443	-	99	75.248	ENSONIG00000006340	rab13	99	75.248	Oreochromis_niloticus
ENSODEG00000010443	-	87	93.220	ENSOCUG00000006286	-	99	93.220	Oryctolagus_cuniculus
ENSODEG00000010443	-	99	75.743	ENSOMEG00000008210	rab13	99	75.743	Oryzias_melastigma
ENSODEG00000010443	-	99	86.139	ENSOGAG00000016969	-	99	86.139	Otolemur_garnettii
ENSODEG00000010443	-	100	89.655	ENSPPAG00000028435	-	100	89.655	Pan_paniscus
ENSODEG00000010443	-	100	86.700	ENSPPRG00000008865	-	100	86.700	Panthera_pardus
ENSODEG00000010443	-	100	89.655	ENSPTRG00000001370	RAB13	100	89.655	Pan_troglodytes
ENSODEG00000010443	-	100	89.655	ENSPANG00000004479	-	100	89.655	Papio_anubis
ENSODEG00000010443	-	99	75.743	ENSPMGG00000007680	rab13	99	75.743	Periophthalmus_magnuspinnatus
ENSODEG00000010443	-	53	95.370	ENSPEMG00000017353	-	81	95.370	Peromyscus_maniculatus_bairdii
ENSODEG00000010443	-	100	86.275	ENSPCIG00000029350	-	100	86.275	Phascolarctos_cinereus
ENSODEG00000010443	-	85	82.659	ENSPLAG00000005832	RAB13	93	82.659	Poecilia_latipinna
ENSODEG00000010443	-	91	78.804	ENSPREG00000017567	rab13	99	73.762	Poecilia_reticulata
ENSODEG00000010443	-	100	89.655	ENSPPYG00000000790	-	100	89.655	Pongo_abelii
ENSODEG00000010443	-	100	89.655	ENSPCOG00000012189	-	100	89.655	Propithecus_coquereli
ENSODEG00000010443	-	100	88.177	ENSPVAG00000011095	-	100	88.177	Pteropus_vampyrus
ENSODEG00000010443	-	87	83.523	ENSPNAG00000004189	rab13	93	83.523	Pygocentrus_nattereri
ENSODEG00000010443	-	100	87.192	ENSRNOG00000016733	Rab13	100	87.192	Rattus_norvegicus
ENSODEG00000010443	-	100	89.163	ENSRBIG00000008552	-	100	89.163	Rhinopithecus_bieti
ENSODEG00000010443	-	100	89.163	ENSRROG00000036885	-	100	89.163	Rhinopithecus_roxellana
ENSODEG00000010443	-	100	89.163	ENSSBOG00000020342	-	100	89.163	Saimiri_boliviensis_boliviensis
ENSODEG00000010443	-	100	85.294	ENSSHAG00000011866	-	100	85.294	Sarcophilus_harrisii
ENSODEG00000010443	-	100	89.655	ENSSSCG00000006564	-	100	89.655	Sus_scrofa
ENSODEG00000010443	-	99	76.238	ENSTRUG00000024177	rab13	99	76.238	Takifugu_rubripes
ENSODEG00000010443	-	100	90.640	ENSTBEG00000012734	-	100	90.640	Tupaia_belangeri
ENSODEG00000010443	-	100	89.163	ENSTTRG00000011183	-	100	89.163	Tursiops_truncatus
ENSODEG00000010443	-	67	82.222	ENSXETG00000020729	rab13	94	74.051	Xenopus_tropicalis
ENSODEG00000010443	-	88	79.213	ENSXCOG00000019533	rab13	95	79.213	Xiphophorus_couchianus