EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000010745 (Gene tree)
Gene ID: 101592182
Gene Symbol: -
Alias: -
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 91518 bases
Position: chrJH651588.1:4988395-5079912
Accession: 101592182
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000014524	XRN_N	PF03159.18	1e-102	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000014714	-	3426	XM_004635585	ENSODEP00000014524	950 (aa)	XP_004635642	UPI000333AA24

Gene Model

Click here to download ENSODEG00000010745's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000010745's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000010745	-	98	91.262	ENSODEG00000000860	-	99	91.262

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000010745	-	100	97.579	ENSG00000088930	XRN2	100	97.579	Homo_sapiens
ENSODEG00000010745	-	97	71.809	ENSAPOG00000009818	xrn2	100	70.540	Acanthochromis_polyacanthus
ENSODEG00000010745	-	100	97.368	ENSAMEG00000012581	XRN2	100	97.368	Ailuropoda_melanoleuca
ENSODEG00000010745	-	90	70.762	ENSACIG00000015047	xrn2	95	74.664	Amphilophus_citrinellus
ENSODEG00000010745	-	97	72.329	ENSAOCG00000023632	xrn2	100	71.066	Amphiprion_ocellaris
ENSODEG00000010745	-	97	72.157	ENSAPEG00000014871	xrn2	100	70.876	Amphiprion_percula
ENSODEG00000010745	-	95	71.831	ENSATEG00000001273	xrn2	97	71.142	Anabas_testudineus
ENSODEG00000010745	-	97	83.638	ENSAPLG00000013869	XRN2	99	84.069	Anas_platyrhynchos
ENSODEG00000010745	-	100	80.642	ENSACAG00000005565	XRN2	100	80.642	Anolis_carolinensis
ENSODEG00000010745	-	100	96.947	ENSANAG00000020126	XRN2	100	96.947	Aotus_nancymaae
ENSODEG00000010745	-	90	73.642	ENSACLG00000010522	xrn2	96	75.833	Astatotilapia_calliptera
ENSODEG00000010745	-	100	71.356	ENSAMXG00000018301	xrn2	100	71.356	Astyanax_mexicanus
ENSODEG00000010745	-	100	96.109	ENSBTAG00000011304	XRN2	100	96.109	Bos_taurus
ENSODEG00000010745	-	87	55.944	WBGene00006964	xrn-2	89	55.215	Caenorhabditis_elegans
ENSODEG00000010745	-	100	97.263	ENSCJAG00000005611	XRN2	100	97.263	Callithrix_jacchus
ENSODEG00000010745	-	100	97.474	ENSCAFG00000005185	XRN2	100	97.474	Canis_familiaris
ENSODEG00000010745	-	100	97.474	ENSCAFG00020027479	XRN2	100	97.474	Canis_lupus_dingo
ENSODEG00000010745	-	100	96.320	ENSCHIG00000006921	XRN2	100	96.320	Capra_hircus
ENSODEG00000010745	-	100	96.842	ENSTSYG00000008315	XRN2	100	96.842	Carlito_syrichta
ENSODEG00000010745	-	97	82.632	ENSCAPG00000010773	XRN2	99	82.524	Cavia_aperea
ENSODEG00000010745	-	100	98.000	ENSCPOG00000009407	XRN2	100	98.000	Cavia_porcellus
ENSODEG00000010745	-	100	97.684	ENSCATG00000040350	XRN2	100	97.684	Cercocebus_atys
ENSODEG00000010745	-	100	99.158	ENSCLAG00000013419	XRN2	100	99.158	Chinchilla_lanigera
ENSODEG00000010745	-	100	97.684	ENSCSAG00000011094	XRN2	100	97.684	Chlorocebus_sabaeus
ENSODEG00000010745	-	68	97.849	ENSCHOG00000013404	XRN2	70	97.849	Choloepus_hoffmanni
ENSODEG00000010745	-	100	85.208	ENSCPBG00000023533	XRN2	100	85.625	Chrysemys_picta_bellii
ENSODEG00000010745	-	86	60.143	ENSCING00000022336	-	100	60.501	Ciona_intestinalis
ENSODEG00000010745	-	87	58.711	ENSCSAVG00000011217	-	100	61.597	Ciona_savignyi
ENSODEG00000010745	-	100	97.684	ENSCANG00000040240	XRN2	100	97.684	Colobus_angolensis_palliatus
ENSODEG00000010745	-	98	96.017	ENSCGRG00001010676	Xrn2	99	96.017	Cricetulus_griseus_chok1gshd
ENSODEG00000010745	-	97	95.254	ENSCGRG00000006378	Xrn2	99	95.254	Cricetulus_griseus_crigri
ENSODEG00000010745	-	54	72.353	ENSCSEG00000005628	xrn2	100	72.353	Cynoglossus_semilaevis
ENSODEG00000010745	-	89	71.724	ENSCVAG00000018999	xrn2	98	77.143	Cyprinodon_variegatus
ENSODEG00000010745	-	100	69.815	ENSDARG00000101900	xrn2	96	78.011	Danio_rerio
ENSODEG00000010745	-	100	96.316	ENSDNOG00000001895	XRN2	100	96.316	Dasypus_novemcinctus
ENSODEG00000010745	-	100	95.158	ENSDORG00000005434	Xrn2	100	95.158	Dipodomys_ordii
ENSODEG00000010745	-	87	56.953	FBgn0031868	Rat1	87	56.832	Drosophila_melanogaster
ENSODEG00000010745	-	100	83.368	ENSETEG00000001740	XRN2	100	83.368	Echinops_telfairi
ENSODEG00000010745	-	84	71.394	ENSEBUG00000016136	xrn2	100	71.394	Eptatretus_burgeri
ENSODEG00000010745	-	100	97.263	ENSEASG00005002484	XRN2	100	97.263	Equus_asinus_asinus
ENSODEG00000010745	-	99	97.149	ENSECAG00000018988	XRN2	96	100.000	Equus_caballus
ENSODEG00000010745	-	80	100.000	ENSEEUG00000009265	XRN2	80	100.000	Erinaceus_europaeus
ENSODEG00000010745	-	100	70.594	ENSELUG00000000552	xrn2	100	71.004	Esox_lucius
ENSODEG00000010745	-	100	97.263	ENSFCAG00000007970	XRN2	100	97.263	Felis_catus
ENSODEG00000010745	-	100	83.019	ENSFALG00000004508	XRN2	100	83.438	Ficedula_albicollis
ENSODEG00000010745	-	100	98.316	ENSFDAG00000016311	XRN2	100	98.316	Fukomys_damarensis
ENSODEG00000010745	-	54	70.152	ENSFHEG00000013039	xrn2	98	70.152	Fundulus_heteroclitus
ENSODEG00000010745	-	86	72.904	ENSGMOG00000013436	xrn2	100	72.904	Gadus_morhua
ENSODEG00000010745	-	100	83.141	ENSGALG00000008372	XRN2	100	83.141	Gallus_gallus
ENSODEG00000010745	-	89	73.837	ENSGAFG00000014284	xrn2	98	73.837	Gambusia_affinis
ENSODEG00000010745	-	87	74.760	ENSGACG00000011870	xrn2	100	74.760	Gasterosteus_aculeatus
ENSODEG00000010745	-	100	85.000	ENSGAGG00000004884	XRN2	100	85.417	Gopherus_agassizii
ENSODEG00000010745	-	100	97.789	ENSGGOG00000013738	XRN2	100	97.789	Gorilla_gorilla
ENSODEG00000010745	-	54	74.664	ENSHBUG00000005077	xrn2	96	75.833	Haplochromis_burtoni
ENSODEG00000010745	-	100	97.368	ENSHGLG00000014831	XRN2	100	97.368	Heterocephalus_glaber_female
ENSODEG00000010745	-	100	97.368	ENSHGLG00100013130	XRN2	100	97.368	Heterocephalus_glaber_male
ENSODEG00000010745	-	99	68.687	ENSHCOG00000011994	xrn2	99	69.596	Hippocampus_comes
ENSODEG00000010745	-	100	70.031	ENSIPUG00000006639	xrn2	100	70.031	Ictalurus_punctatus
ENSODEG00000010745	-	100	98.000	ENSSTOG00000000589	XRN2	100	98.000	Ictidomys_tridecemlineatus
ENSODEG00000010745	-	100	96.421	ENSJJAG00000022128	Xrn2	100	96.421	Jaculus_jaculus
ENSODEG00000010745	-	54	79.883	ENSLBEG00000010041	xrn2	100	79.883	Labrus_bergylta
ENSODEG00000010745	-	94	76.974	ENSLACG00000008307	XRN2	99	79.387	Latimeria_chalumnae
ENSODEG00000010745	-	99	73.013	ENSLOCG00000016874	xrn2	100	73.013	Lepisosteus_oculatus
ENSODEG00000010745	-	100	95.579	ENSLAFG00000014624	XRN2	100	95.579	Loxodonta_africana
ENSODEG00000010745	-	100	97.684	ENSMFAG00000038122	XRN2	100	97.684	Macaca_fascicularis
ENSODEG00000010745	-	100	97.684	ENSMMUG00000011405	XRN2	100	97.684	Macaca_mulatta
ENSODEG00000010745	-	100	97.789	ENSMNEG00000040626	XRN2	100	97.789	Macaca_nemestrina
ENSODEG00000010745	-	100	97.579	ENSMLEG00000041897	XRN2	100	97.579	Mandrillus_leucophaeus
ENSODEG00000010745	-	95	72.905	ENSMAMG00000008633	xrn2	98	71.384	Mastacembelus_armatus
ENSODEG00000010745	-	90	75.607	ENSMZEG00005022362	xrn2	97	75.607	Maylandia_zebra
ENSODEG00000010745	-	99	81.562	ENSMGAG00000003196	XRN2	99	81.562	Meleagris_gallopavo
ENSODEG00000010745	-	100	96.421	ENSMAUG00000021842	Xrn2	100	96.421	Mesocricetus_auratus
ENSODEG00000010745	-	100	96.842	ENSMICG00000008126	XRN2	100	96.842	Microcebus_murinus
ENSODEG00000010745	-	100	95.895	ENSMOCG00000012588	Xrn2	100	95.895	Microtus_ochrogaster
ENSODEG00000010745	-	89	73.769	ENSMMOG00000017576	xrn2	96	74.573	Mola_mola
ENSODEG00000010745	-	100	91.158	ENSMODG00000006163	XRN2	100	91.158	Monodelphis_domestica
ENSODEG00000010745	-	91	72.135	ENSMALG00000011355	xrn2	99	72.135	Monopterus_albus
ENSODEG00000010745	-	100	95.373	MGP_CAROLIEiJ_G0024400	Xrn2	100	95.373	Mus_caroli
ENSODEG00000010745	-	100	95.584	ENSMUSG00000027433	Xrn2	100	95.584	Mus_musculus
ENSODEG00000010745	-	100	95.373	MGP_PahariEiJ_G0025843	Xrn2	100	95.373	Mus_pahari
ENSODEG00000010745	-	100	95.584	MGP_SPRETEiJ_G0025318	Xrn2	100	95.584	Mus_spretus
ENSODEG00000010745	-	100	95.657	ENSMPUG00000001198	XRN2	93	95.657	Mustela_putorius_furo
ENSODEG00000010745	-	100	97.158	ENSMLUG00000001536	XRN2	100	97.158	Myotis_lucifugus
ENSODEG00000010745	-	100	96.526	ENSNGAG00000018138	Xrn2	100	96.526	Nannospalax_galili
ENSODEG00000010745	-	90	75.810	ENSNBRG00000008062	xrn2	97	75.810	Neolamprologus_brichardi
ENSODEG00000010745	-	100	97.579	ENSNLEG00000009991	XRN2	100	97.579	Nomascus_leucogenys
ENSODEG00000010745	-	66	97.778	ENSMEUG00000008622	-	67	97.778	Notamacropus_eugenii
ENSODEG00000010745	-	75	79.058	ENSOPRG00000001397	-	77	79.058	Ochotona_princeps
ENSODEG00000010745	-	100	71.649	ENSONIG00000018720	xrn2	100	71.856	Oreochromis_niloticus
ENSODEG00000010745	-	100	91.492	ENSOANG00000015673	XRN2	100	91.492	Ornithorhynchus_anatinus
ENSODEG00000010745	-	100	97.684	ENSOCUG00000013468	XRN2	100	97.684	Oryctolagus_cuniculus
ENSODEG00000010745	-	98	70.301	ENSORLG00000017213	xrn2	97	74.827	Oryzias_latipes
ENSODEG00000010745	-	98	70.301	ENSORLG00020001824	xrn2	100	69.959	Oryzias_latipes_hni
ENSODEG00000010745	-	98	70.093	ENSORLG00015019747	xrn2	100	69.756	Oryzias_latipes_hsok
ENSODEG00000010745	-	90	74.104	ENSOMEG00000019820	xrn2	100	69.543	Oryzias_melastigma
ENSODEG00000010745	-	100	96.320	ENSOGAG00000001068	XRN2	100	96.320	Otolemur_garnettii
ENSODEG00000010745	-	97	96.328	ENSOARG00000004443	XRN2	100	96.328	Ovis_aries
ENSODEG00000010745	-	100	97.789	ENSPPAG00000033549	XRN2	100	97.789	Pan_paniscus
ENSODEG00000010745	-	100	97.263	ENSPPRG00000008732	XRN2	100	97.263	Panthera_pardus
ENSODEG00000010745	-	97	97.189	ENSPTIG00000015683	XRN2	97	97.189	Panthera_tigris_altaica
ENSODEG00000010745	-	100	97.789	ENSPTRG00000013308	XRN2	100	97.789	Pan_troglodytes
ENSODEG00000010745	-	100	97.684	ENSPANG00000018088	XRN2	100	97.684	Papio_anubis
ENSODEG00000010745	-	100	70.931	ENSPKIG00000016889	xrn2	100	70.931	Paramormyrops_kingsleyae
ENSODEG00000010745	-	81	87.370	ENSPSIG00000014666	XRN2	100	87.370	Pelodiscus_sinensis
ENSODEG00000010745	-	100	95.684	ENSPEMG00000000111	Xrn2	100	95.684	Peromyscus_maniculatus_bairdii
ENSODEG00000010745	-	100	69.990	ENSPFOG00000004182	xrn2	99	70.393	Poecilia_formosa
ENSODEG00000010745	-	89	74.535	ENSPLAG00000007351	xrn2	96	74.535	Poecilia_latipinna
ENSODEG00000010745	-	94	68.444	ENSPMEG00000011798	xrn2	99	69.314	Poecilia_mexicana
ENSODEG00000010745	-	89	74.419	ENSPREG00000012452	xrn2	99	72.840	Poecilia_reticulata
ENSODEG00000010745	-	100	97.158	ENSPPYG00000010755	XRN2	100	97.158	Pongo_abelii
ENSODEG00000010745	-	100	90.231	ENSPCAG00000011191	XRN2	100	90.231	Procavia_capensis
ENSODEG00000010745	-	100	89.895	ENSPCOG00000016468	XRN2	100	89.895	Propithecus_coquereli
ENSODEG00000010745	-	93	94.529	ENSPVAG00000004596	XRN2	93	94.529	Pteropus_vampyrus
ENSODEG00000010745	-	90	73.642	ENSPNYG00000001765	xrn2	97	73.642	Pundamilia_nyererei
ENSODEG00000010745	-	100	71.531	ENSPNAG00000010956	xrn2	99	71.531	Pygocentrus_nattereri
ENSODEG00000010745	-	100	96.425	ENSRNOG00000011785	Xrn2	100	96.425	Rattus_norvegicus
ENSODEG00000010745	-	86	97.677	ENSRBIG00000036193	XRN2	100	97.677	Rhinopithecus_bieti
ENSODEG00000010745	-	100	97.684	ENSRROG00000044400	XRN2	90	97.684	Rhinopithecus_roxellana
ENSODEG00000010745	-	69	52.055	YOR048C	RAT1	63	53.606	Saccharomyces_cerevisiae
ENSODEG00000010745	-	100	97.263	ENSSBOG00000021014	XRN2	100	97.263	Saimiri_boliviensis_boliviensis
ENSODEG00000010745	-	100	71.930	ENSSFOG00015001091	xrn2	100	71.930	Scleropages_formosus
ENSODEG00000010745	-	92	73.025	ENSSMAG00000007834	xrn2	100	68.794	Scophthalmus_maximus
ENSODEG00000010745	-	91	72.059	ENSSDUG00000012802	xrn2	99	72.398	Seriola_dumerili
ENSODEG00000010745	-	93	73.672	ENSSLDG00000021273	xrn2	100	73.672	Seriola_lalandi_dorsalis
ENSODEG00000010745	-	76	100.000	ENSSARG00000005859	-	76	100.000	Sorex_araneus
ENSODEG00000010745	-	98	80.342	ENSSPUG00000005485	XRN2	96	80.449	Sphenodon_punctatus
ENSODEG00000010745	-	100	70.829	ENSSPAG00000016027	xrn2	99	70.829	Stegastes_partitus
ENSODEG00000010745	-	100	95.158	ENSSSCG00000007109	XRN2	100	95.158	Sus_scrofa
ENSODEG00000010745	-	100	82.046	ENSTGUG00000007535	XRN2	100	82.463	Taeniopygia_guttata
ENSODEG00000010745	-	100	68.113	ENSTRUG00000015489	xrn2	100	68.554	Takifugu_rubripes
ENSODEG00000010745	-	100	70.924	ENSTNIG00000010712	xrn2	100	70.924	Tetraodon_nigroviridis
ENSODEG00000010745	-	100	96.947	ENSTBEG00000004119	XRN2	100	96.947	Tupaia_belangeri
ENSODEG00000010745	-	93	96.937	ENSTTRG00000009087	XRN2	93	96.937	Tursiops_truncatus
ENSODEG00000010745	-	100	97.474	ENSUAMG00000024634	XRN2	100	97.474	Ursus_americanus
ENSODEG00000010745	-	97	97.189	ENSUMAG00000004012	XRN2	95	97.189	Ursus_maritimus
ENSODEG00000010745	-	89	89.822	ENSVPAG00000010694	XRN2	91	89.822	Vicugna_pacos
ENSODEG00000010745	-	100	97.579	ENSVVUG00000012178	XRN2	100	97.579	Vulpes_vulpes
ENSODEG00000010745	-	100	74.453	ENSXETG00000023501	xrn2	100	75.078	Xenopus_tropicalis
ENSODEG00000010745	-	100	68.551	ENSXMAG00000000242	xrn2	92	79.075	Xiphophorus_maculatus