EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000010824 (Gene tree)
Gene ID: 101582548
Gene Symbol: LARP1
Alias: KIAA0731|LARP|MGC19556
Full Name: La ribonucleoprotein domain family member 1
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 67746 bases
Position: chrJH651544.1:10328795-10396540
Accession: 101582548
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000014636	La	PF05383.17	6.9e-21	1	1
ENSODEP00000014635	La	PF05383.17	1.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000014827	LARP1-202	2955	XM_012514310	ENSODEP00000014636	954 (aa)	XP_023568894	-
ENSODET00000014826	LARP1-201	3708	-	ENSODEP00000014635	1235 (aa)	-	-

Gene Model

Click here to download ENSODEG00000010824's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000010824's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000010824	LARP1	100	95.702	ENSG00000155506	LARP1	100	95.765	Homo_sapiens
ENSODEG00000010824	LARP1	86	81.057	ENSAPOG00000020685	larp1	86	83.178	Acanthochromis_polyacanthus
ENSODEG00000010824	LARP1	100	96.017	ENSAMEG00000016673	LARP1	100	96.029	Ailuropoda_melanoleuca
ENSODEG00000010824	LARP1	99	65.441	ENSACIG00000012994	larp1	86	63.731	Amphilophus_citrinellus
ENSODEG00000010824	LARP1	86	70.305	ENSAOCG00000007792	larp1	97	70.987	Amphiprion_ocellaris
ENSODEG00000010824	LARP1	97	68.737	ENSAPEG00000022246	larp1	88	67.451	Amphiprion_percula
ENSODEG00000010824	LARP1	97	66.460	ENSATEG00000013523	larp1	84	66.564	Anabas_testudineus
ENSODEG00000010824	LARP1	93	84.287	ENSAPLG00000007559	LARP1	99	84.287	Anas_platyrhynchos
ENSODEG00000010824	LARP1	100	79.775	ENSACAG00000004071	LARP1	100	79.805	Anolis_carolinensis
ENSODEG00000010824	LARP1	100	95.912	ENSANAG00000029949	LARP1	100	92.931	Aotus_nancymaae
ENSODEG00000010824	LARP1	99	68.340	ENSACLG00000015256	larp1	98	67.339	Astatotilapia_calliptera
ENSODEG00000010824	LARP1	97	70.677	ENSAMXG00000000859	larp1	87	70.170	Astyanax_mexicanus
ENSODEG00000010824	LARP1	100	95.388	ENSBTAG00000008443	LARP1	87	95.388	Bos_taurus
ENSODEG00000010824	LARP1	100	95.912	ENSCJAG00000004454	LARP1	95	94.731	Callithrix_jacchus
ENSODEG00000010824	LARP1	99	96.222	ENSCAFG00000017639	LARP1	100	96.230	Canis_familiaris
ENSODEG00000010824	LARP1	94	96.536	ENSCAFG00020023860	LARP1	100	96.536	Canis_lupus_dingo
ENSODEG00000010824	LARP1	100	94.549	ENSCHIG00000014414	LARP1	90	92.887	Capra_hircus
ENSODEG00000010824	LARP1	100	95.178	ENSTSYG00000013732	LARP1	99	91.614	Carlito_syrichta
ENSODEG00000010824	LARP1	88	94.905	ENSCAPG00000013865	LARP1	86	94.905	Cavia_aperea
ENSODEG00000010824	LARP1	100	97.275	ENSCPOG00000003377	LARP1	100	97.275	Cavia_porcellus
ENSODEG00000010824	LARP1	100	95.912	ENSCCAG00000025201	LARP1	95	94.835	Cebus_capucinus
ENSODEG00000010824	LARP1	100	95.597	ENSCATG00000030675	LARP1	93	95.602	Cercocebus_atys
ENSODEG00000010824	LARP1	100	98.113	ENSCLAG00000012755	LARP1	99	96.209	Chinchilla_lanigera
ENSODEG00000010824	LARP1	94	92.291	ENSCSAG00000010800	LARP1	100	92.179	Chlorocebus_sabaeus
ENSODEG00000010824	LARP1	92	89.637	ENSCHOG00000012716	LARP1	88	89.637	Choloepus_hoffmanni
ENSODEG00000010824	LARP1	100	81.497	ENSCPBG00000002173	LARP1	94	81.497	Chrysemys_picta_bellii
ENSODEG00000010824	LARP1	100	95.597	ENSCANG00000037418	LARP1	95	94.525	Colobus_angolensis_palliatus
ENSODEG00000010824	LARP1	99	95.488	ENSCGRG00001016913	Larp1	89	95.488	Cricetulus_griseus_chok1gshd
ENSODEG00000010824	LARP1	96	90.533	ENSCGRG00000009916	Larp1	99	91.077	Cricetulus_griseus_crigri
ENSODEG00000010824	LARP1	98	67.913	ENSCSEG00000016431	larp1	89	67.107	Cynoglossus_semilaevis
ENSODEG00000010824	LARP1	99	67.492	ENSCVAG00000022687	larp1	86	67.742	Cyprinodon_variegatus
ENSODEG00000010824	LARP1	99	66.105	ENSDARG00000101722	larp1	92	66.002	Danio_rerio
ENSODEG00000010824	LARP1	100	93.828	ENSDNOG00000012073	LARP1	87	93.828	Dasypus_novemcinctus
ENSODEG00000010824	LARP1	100	93.291	ENSDORG00000002897	Larp1	100	92.157	Dipodomys_ordii
ENSODEG00000010824	LARP1	92	95.568	ENSETEG00000020251	LARP1	100	95.568	Echinops_telfairi
ENSODEG00000010824	LARP1	100	95.702	ENSEASG00005001070	LARP1	87	96.653	Equus_asinus_asinus
ENSODEG00000010824	LARP1	100	95.702	ENSECAG00000017002	LARP1	69	95.702	Equus_caballus
ENSODEG00000010824	LARP1	98	89.722	ENSEEUG00000001065	LARP1	100	89.722	Erinaceus_europaeus
ENSODEG00000010824	LARP1	99	67.528	ENSELUG00000019403	larp1	88	67.788	Esox_lucius
ENSODEG00000010824	LARP1	100	96.122	ENSFCAG00000000592	LARP1	94	94.603	Felis_catus
ENSODEG00000010824	LARP1	88	81.324	ENSFALG00000008335	LARP1	99	81.732	Ficedula_albicollis
ENSODEG00000010824	LARP1	100	96.646	ENSFDAG00000021125	LARP1	100	96.646	Fukomys_damarensis
ENSODEG00000010824	LARP1	59	57.319	ENSFHEG00000020307	larp1	92	63.930	Fundulus_heteroclitus
ENSODEG00000010824	LARP1	100	82.255	ENSGALG00000040109	LARP1	95	79.666	Gallus_gallus
ENSODEG00000010824	LARP1	100	81.308	ENSGAGG00000025113	LARP1	99	81.223	Gopherus_agassizii
ENSODEG00000010824	LARP1	100	95.702	ENSGGOG00000006048	LARP1	93	95.707	Gorilla_gorilla
ENSODEG00000010824	LARP1	99	68.486	ENSHBUG00000020762	larp1	97	68.623	Haplochromis_burtoni
ENSODEG00000010824	LARP1	98	96.360	ENSHGLG00000006267	LARP1	86	95.648	Heterocephalus_glaber_female
ENSODEG00000010824	LARP1	99	79.894	ENSHGLG00100003395	-	86	80.065	Heterocephalus_glaber_male
ENSODEG00000010824	LARP1	100	96.646	ENSHGLG00100014230	-	100	96.646	Heterocephalus_glaber_male
ENSODEG00000010824	LARP1	88	79.108	ENSHCOG00000010786	larp1	86	79.108	Hippocampus_comes
ENSODEG00000010824	LARP1	98	65.572	ENSIPUG00000019105	Larp1	91	65.924	Ictalurus_punctatus
ENSODEG00000010824	LARP1	100	93.396	ENSSTOG00000005678	LARP1	99	93.396	Ictidomys_tridecemlineatus
ENSODEG00000010824	LARP1	100	89.727	ENSJJAG00000016950	Larp1	90	89.727	Jaculus_jaculus
ENSODEG00000010824	LARP1	96	69.329	ENSKMAG00000018468	larp1	96	68.050	Kryptolebias_marmoratus
ENSODEG00000010824	LARP1	97	68.590	ENSLBEG00000027172	larp1	85	68.697	Labrus_bergylta
ENSODEG00000010824	LARP1	93	75.785	ENSLOCG00000012457	larp1	92	75.138	Lepisosteus_oculatus
ENSODEG00000010824	LARP1	100	93.920	ENSLAFG00000008991	LARP1	90	92.784	Loxodonta_africana
ENSODEG00000010824	LARP1	100	95.178	ENSMFAG00000031651	LARP1	93	95.183	Macaca_fascicularis
ENSODEG00000010824	LARP1	100	91.824	ENSMMUG00000009411	LARP1	99	91.719	Macaca_mulatta
ENSODEG00000010824	LARP1	99	92.827	ENSMNEG00000039294	LARP1	100	95.419	Macaca_nemestrina
ENSODEG00000010824	LARP1	100	95.702	ENSMLEG00000035142	LARP1	93	95.707	Mandrillus_leucophaeus
ENSODEG00000010824	LARP1	99	68.122	ENSMAMG00000021788	larp1	89	67.365	Mastacembelus_armatus
ENSODEG00000010824	LARP1	99	68.340	ENSMZEG00005009345	larp1	98	67.339	Maylandia_zebra
ENSODEG00000010824	LARP1	100	80.678	ENSMGAG00000005696	LARP1	100	80.682	Meleagris_gallopavo
ENSODEG00000010824	LARP1	99	95.278	ENSMAUG00000001385	Larp1	89	95.278	Mesocricetus_auratus
ENSODEG00000010824	LARP1	100	94.340	ENSMICG00000000837	LARP1	99	95.973	Microcebus_murinus
ENSODEG00000010824	LARP1	99	95.698	ENSMOCG00000008920	Larp1	89	95.698	Microtus_ochrogaster
ENSODEG00000010824	LARP1	83	59.720	ENSMMOG00000013364	larp1	78	62.534	Mola_mola
ENSODEG00000010824	LARP1	100	82.848	ENSMODG00000008663	LARP1	99	82.937	Monodelphis_domestica
ENSODEG00000010824	LARP1	99	67.644	ENSMALG00000017180	larp1	98	66.096	Monopterus_albus
ENSODEG00000010824	LARP1	99	95.488	MGP_CAROLIEiJ_G0016383	Larp1	89	95.488	Mus_caroli
ENSODEG00000010824	LARP1	99	95.383	ENSMUSG00000037331	Larp1	89	95.383	Mus_musculus
ENSODEG00000010824	LARP1	99	95.698	MGP_PahariEiJ_G0017518	Larp1	89	95.698	Mus_pahari
ENSODEG00000010824	LARP1	99	95.488	MGP_SPRETEiJ_G0017225	Larp1	89	95.488	Mus_spretus
ENSODEG00000010824	LARP1	79	96.169	ENSMPUG00000013564	LARP1	85	94.696	Mustela_putorius_furo
ENSODEG00000010824	LARP1	99	91.903	ENSMLUG00000002608	LARP1	100	91.929	Myotis_lucifugus
ENSODEG00000010824	LARP1	99	91.291	ENSNGAG00000001098	Larp1	99	91.186	Nannospalax_galili
ENSODEG00000010824	LARP1	96	68.314	ENSNBRG00000008963	larp1	92	67.725	Neolamprologus_brichardi
ENSODEG00000010824	LARP1	100	92.662	ENSNLEG00000016588	LARP1	99	89.885	Nomascus_leucogenys
ENSODEG00000010824	LARP1	100	76.415	ENSMEUG00000002957	LARP1	100	76.730	Notamacropus_eugenii
ENSODEG00000010824	LARP1	100	96.122	ENSOPRG00000013014	LARP1	100	96.122	Ochotona_princeps
ENSODEG00000010824	LARP1	99	69.937	ENSONIG00000017308	larp1	88	69.342	Oreochromis_niloticus
ENSODEG00000010824	LARP1	99	82.523	ENSOANG00000005096	LARP1	98	83.161	Ornithorhynchus_anatinus
ENSODEG00000010824	LARP1	100	97.170	ENSOCUG00000013066	LARP1	90	95.979	Oryctolagus_cuniculus
ENSODEG00000010824	LARP1	96	68.196	ENSORLG00000000824	larp1	96	71.795	Oryzias_latipes
ENSODEG00000010824	LARP1	96	68.196	ENSORLG00020022241	larp1	86	68.139	Oryzias_latipes_hni
ENSODEG00000010824	LARP1	96	66.382	ENSORLG00015007538	larp1	86	66.247	Oryzias_latipes_hsok
ENSODEG00000010824	LARP1	96	66.489	ENSOMEG00000003134	larp1	87	66.038	Oryzias_melastigma
ENSODEG00000010824	LARP1	100	95.283	ENSOGAG00000016750	LARP1	100	95.283	Otolemur_garnettii
ENSODEG00000010824	LARP1	100	92.767	ENSOARG00000009893	LARP1	99	93.201	Ovis_aries
ENSODEG00000010824	LARP1	100	95.702	ENSPPAG00000042993	LARP1	95	94.525	Pan_paniscus
ENSODEG00000010824	LARP1	100	94.444	ENSPPRG00000009780	LARP1	95	93.808	Panthera_pardus
ENSODEG00000010824	LARP1	100	94.444	ENSPTIG00000007013	LARP1	95	93.808	Panthera_tigris_altaica
ENSODEG00000010824	LARP1	100	95.493	ENSPTRG00000017447	LARP1	95	94.318	Pan_troglodytes
ENSODEG00000010824	LARP1	100	95.597	ENSPANG00000008080	LARP1	93	95.602	Papio_anubis
ENSODEG00000010824	LARP1	98	65.466	ENSPKIG00000017153	-	86	66.556	Paramormyrops_kingsleyae
ENSODEG00000010824	LARP1	99	70.324	ENSPKIG00000010096	larp1	85	71.613	Paramormyrops_kingsleyae
ENSODEG00000010824	LARP1	94	67.728	ENSPMGG00000011599	larp1	91	67.349	Periophthalmus_magnuspinnatus
ENSODEG00000010824	LARP1	99	92.025	ENSPEMG00000022523	Larp1	99	91.920	Peromyscus_maniculatus_bairdii
ENSODEG00000010824	LARP1	99	82.686	ENSPCIG00000019242	LARP1	77	88.967	Phascolarctos_cinereus
ENSODEG00000010824	LARP1	96	67.925	ENSPFOG00000005836	larp1	85	67.987	Poecilia_formosa
ENSODEG00000010824	LARP1	96	68.763	ENSPLAG00000008936	larp1	85	68.388	Poecilia_latipinna
ENSODEG00000010824	LARP1	96	68.134	ENSPMEG00000013656	larp1	85	68.092	Poecilia_mexicana
ENSODEG00000010824	LARP1	96	67.925	ENSPREG00000005726	larp1	95	67.983	Poecilia_reticulata
ENSODEG00000010824	LARP1	100	90.461	ENSPCAG00000006407	LARP1	100	90.147	Procavia_capensis
ENSODEG00000010824	LARP1	100	87.736	ENSPCOG00000016949	LARP1	100	91.300	Propithecus_coquereli
ENSODEG00000010824	LARP1	100	95.393	ENSPVAG00000002262	LARP1	87	95.393	Pteropus_vampyrus
ENSODEG00000010824	LARP1	99	68.340	ENSPNYG00000007938	larp1	98	67.339	Pundamilia_nyererei
ENSODEG00000010824	LARP1	99	70.304	ENSPNAG00000021427	larp1	88	70.308	Pygocentrus_nattereri
ENSODEG00000010824	LARP1	99	92.340	ENSRNOG00000031544	Larp1	99	92.235	Rattus_norvegicus
ENSODEG00000010824	LARP1	100	95.493	ENSRBIG00000038005	LARP1	95	94.318	Rhinopithecus_bieti
ENSODEG00000010824	LARP1	100	95.388	ENSRROG00000034073	LARP1	100	95.531	Rhinopithecus_roxellana
ENSODEG00000010824	LARP1	100	95.912	ENSSBOG00000019816	LARP1	100	92.372	Saimiri_boliviensis_boliviensis
ENSODEG00000010824	LARP1	100	84.205	ENSSHAG00000011115	LARP1	100	84.150	Sarcophilus_harrisii
ENSODEG00000010824	LARP1	99	68.464	ENSSFOG00015020304	larp1	94	67.674	Scleropages_formosus
ENSODEG00000010824	LARP1	99	69.125	ENSSFOG00015018058	-	84	70.486	Scleropages_formosus
ENSODEG00000010824	LARP1	93	67.637	ENSSMAG00000007468	larp1	85	66.923	Scophthalmus_maximus
ENSODEG00000010824	LARP1	99	67.440	ENSSDUG00000000268	larp1	95	70.930	Seriola_dumerili
ENSODEG00000010824	LARP1	81	75.193	ENSSLDG00000016505	larp1	95	70.267	Seriola_lalandi_dorsalis
ENSODEG00000010824	LARP1	64	92.580	ENSSARG00000013907	-	89	93.558	Sorex_araneus
ENSODEG00000010824	LARP1	100	81.554	ENSSPUG00000012179	-	86	80.840	Sphenodon_punctatus
ENSODEG00000010824	LARP1	99	67.923	ENSSPAG00000003910	larp1	88	67.269	Stegastes_partitus
ENSODEG00000010824	LARP1	100	95.393	ENSSSCG00000017069	LARP1	100	95.647	Sus_scrofa
ENSODEG00000010824	LARP1	96	83.224	ENSTGUG00000000704	LARP1	100	83.224	Taeniopygia_guttata
ENSODEG00000010824	LARP1	99	66.598	ENSTRUG00000009470	larp1	88	66.022	Takifugu_rubripes
ENSODEG00000010824	LARP1	93	94.576	ENSTBEG00000003381	LARP1	100	94.576	Tupaia_belangeri
ENSODEG00000010824	LARP1	99	95.855	ENSTTRG00000015934	LARP1	100	95.597	Tursiops_truncatus
ENSODEG00000010824	LARP1	100	96.017	ENSUAMG00000019334	LARP1	87	96.017	Ursus_americanus
ENSODEG00000010824	LARP1	99	92.729	ENSUMAG00000002934	LARP1	99	92.729	Ursus_maritimus
ENSODEG00000010824	LARP1	94	96.536	ENSVVUG00000004644	LARP1	100	96.536	Vulpes_vulpes
ENSODEG00000010824	LARP1	96	77.874	ENSXETG00000008413	larp1	88	77.874	Xenopus_tropicalis
ENSODEG00000010824	LARP1	77	73.217	ENSXCOG00000004022	larp1	77	74.616	Xiphophorus_couchianus
ENSODEG00000010824	LARP1	96	67.820	ENSXMAG00000018780	larp1	85	68.025	Xiphophorus_maculatus