EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000011160 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 790 bases
Position: chrJH651593.1:6144629-6145418
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000015120	RRM_1	PF00076.22	1.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000015318	-	741	-	ENSODEP00000015120	246 (aa)	-	-

Gene Model

Click here to download ENSODEG00000011160's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000011160's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000011160	-	74	45.714	ENSODEG00000001012	RALYL	68	46.078
ENSODEG00000011160	-	100	73.801	ENSODEG00000008369	-	91	72.364
ENSODEG00000011160	-	58	83.916	ENSODEG00000012831	-	73	83.916
ENSODEG00000011160	-	70	41.081	ENSODEG00000001160	-	63	39.459
ENSODEG00000011160	-	72	39.048	ENSODEG00000000603	-	64	40.201
ENSODEG00000011160	-	66	37.017	ENSODEG00000012803	-	61	35.088
ENSODEG00000011160	-	70	42.000	ENSODEG00000020161	-	65	41.000
ENSODEG00000011160	-	70	42.408	ENSODEG00000008102	-	64	42.781
ENSODEG00000011160	-	70	37.634	ENSODEG00000017188	-	63	36.170

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000011160	-	100	70.722	ENSG00000125970	RALY	91	70.833	Homo_sapiens
ENSODEG00000011160	-	70	54.011	ENSAPOG00000001026	raly	63	54.545	Acanthochromis_polyacanthus
ENSODEG00000011160	-	100	64.516	ENSAMEG00000009050	RALY	91	64.516	Ailuropoda_melanoleuca
ENSODEG00000011160	-	74	55.000	ENSACIG00000024288	raly	72	57.143	Amphilophus_citrinellus
ENSODEG00000011160	-	70	53.476	ENSAOCG00000009883	raly	57	54.011	Amphiprion_ocellaris
ENSODEG00000011160	-	70	53.476	ENSAPEG00000024106	raly	58	54.011	Amphiprion_percula
ENSODEG00000011160	-	70	55.615	ENSATEG00000004870	raly	61	55.615	Anabas_testudineus
ENSODEG00000011160	-	75	63.184	ENSAPLG00000012983	RALY	66	65.608	Anas_platyrhynchos
ENSODEG00000011160	-	100	55.094	ENSACAG00000008983	RALY	79	55.303	Anolis_carolinensis
ENSODEG00000011160	-	100	70.455	ENSANAG00000019376	RALY	91	70.455	Aotus_nancymaae
ENSODEG00000011160	-	70	60.819	ENSACLG00000007561	raly	55	61.404	Astatotilapia_calliptera
ENSODEG00000011160	-	100	69.962	ENSBTAG00000016524	RALY	90	67.300	Bos_taurus
ENSODEG00000011160	-	100	70.677	ENSCJAG00000018361	-	91	69.549	Callithrix_jacchus
ENSODEG00000011160	-	100	69.925	ENSCJAG00000009449	-	91	70.301	Callithrix_jacchus
ENSODEG00000011160	-	100	70.301	ENSCAFG00000007490	RALY	91	70.301	Canis_familiaris
ENSODEG00000011160	-	100	70.677	ENSCAFG00020005069	RALY	91	70.677	Canis_lupus_dingo
ENSODEG00000011160	-	100	65.950	ENSCHIG00000026609	RALY	91	68.100	Capra_hircus
ENSODEG00000011160	-	100	70.800	ENSTSYG00000002598	RALY	90	70.800	Carlito_syrichta
ENSODEG00000011160	-	94	67.717	ENSCAPG00000008110	RALY	84	76.404	Cavia_aperea
ENSODEG00000011160	-	100	70.035	ENSCPOG00000000309	RALY	84	83.146	Cavia_porcellus
ENSODEG00000011160	-	100	71.053	ENSCCAG00000024548	RALY	91	69.549	Cebus_capucinus
ENSODEG00000011160	-	100	68.401	ENSCATG00000031769	RALY	91	68.148	Cercocebus_atys
ENSODEG00000011160	-	100	72.862	ENSCLAG00000016899	RALY	91	74.721	Chinchilla_lanigera
ENSODEG00000011160	-	100	64.236	ENSCSAG00000012199	RALY	91	63.322	Chlorocebus_sabaeus
ENSODEG00000011160	-	72	66.146	ENSCHOG00000000266	RALY	82	66.146	Choloepus_hoffmanni
ENSODEG00000011160	-	100	56.061	ENSCPBG00000019164	RALY	88	55.894	Chrysemys_picta_bellii
ENSODEG00000011160	-	100	69.925	ENSCANG00000037952	RALY	91	70.787	Colobus_angolensis_palliatus
ENSODEG00000011160	-	100	68.000	ENSCGRG00001014652	Raly	91	70.545	Cricetulus_griseus_chok1gshd
ENSODEG00000011160	-	100	68.000	ENSCGRG00000011726	Raly	91	70.545	Cricetulus_griseus_crigri
ENSODEG00000011160	-	80	61.421	ENSDARG00000059972	raly	66	66.279	Danio_rerio
ENSODEG00000011160	-	94	64.151	ENSDNOG00000003227	-	90	62.642	Dasypus_novemcinctus
ENSODEG00000011160	-	100	67.300	ENSDNOG00000046782	-	90	67.557	Dasypus_novemcinctus
ENSODEG00000011160	-	75	79.348	ENSDORG00000013400	Raly	83	78.977	Dipodomys_ordii
ENSODEG00000011160	-	61	58.788	ENSETEG00000001919	-	54	58.788	Echinops_telfairi
ENSODEG00000011160	-	72	64.062	ENSETEG00000012464	-	87	64.062	Echinops_telfairi
ENSODEG00000011160	-	100	73.004	ENSEASG00005008501	RALY	90	66.920	Equus_asinus_asinus
ENSODEG00000011160	-	100	68.817	ENSECAG00000012357	RALY	91	63.441	Equus_caballus
ENSODEG00000011160	-	100	68.817	ENSECAG00000037642	-	91	63.441	Equus_caballus
ENSODEG00000011160	-	100	68.817	ENSECAG00000030217	-	91	63.441	Equus_caballus
ENSODEG00000011160	-	100	56.475	ENSEEUG00000005356	RALY	91	54.676	Erinaceus_europaeus
ENSODEG00000011160	-	70	63.372	ENSELUG00000011138	raly	69	53.171	Esox_lucius
ENSODEG00000011160	-	100	66.667	ENSFCAG00000025252	RALY	91	64.516	Felis_catus
ENSODEG00000011160	-	100	71.898	ENSFDAG00000010175	RALY	91	70.438	Fukomys_damarensis
ENSODEG00000011160	-	70	55.556	ENSFHEG00000018618	raly	72	55.556	Fundulus_heteroclitus
ENSODEG00000011160	-	72	40.206	ENSGMOG00000012589	raly	87	40.206	Gadus_morhua
ENSODEG00000011160	-	100	56.818	ENSGALG00000033696	RALY	90	56.274	Gallus_gallus
ENSODEG00000011160	-	74	49.246	ENSGACG00000003636	raly	67	51.596	Gasterosteus_aculeatus
ENSODEG00000011160	-	74	63.819	ENSGAGG00000016266	RALY	59	65.445	Gopherus_agassizii
ENSODEG00000011160	-	100	68.821	ENSGGOG00000022709	RALY	91	69.318	Gorilla_gorilla
ENSODEG00000011160	-	70	60.819	ENSHBUG00000021321	raly	58	61.628	Haplochromis_burtoni
ENSODEG00000011160	-	100	69.847	ENSHGLG00000021175	-	91	72.243	Heterocephalus_glaber_female
ENSODEG00000011160	-	100	68.056	ENSHGLG00000017779	-	84	81.461	Heterocephalus_glaber_female
ENSODEG00000011160	-	100	69.065	ENSHGLG00100003933	RALY	84	81.461	Heterocephalus_glaber_male
ENSODEG00000011160	-	99	72.470	ENSHGLG00100003829	-	97	72.470	Heterocephalus_glaber_male
ENSODEG00000011160	-	100	60.976	ENSHGLG00100000278	-	89	61.789	Heterocephalus_glaber_male
ENSODEG00000011160	-	78	41.706	ENSHCOG00000012268	raly	77	42.553	Hippocampus_comes
ENSODEG00000011160	-	100	67.025	ENSSTOG00000008810	RALY	91	66.308	Ictidomys_tridecemlineatus
ENSODEG00000011160	-	75	79.891	ENSJJAG00000008473	Raly	84	79.213	Jaculus_jaculus
ENSODEG00000011160	-	72	57.865	ENSKMAG00000015656	raly	71	58.523	Kryptolebias_marmoratus
ENSODEG00000011160	-	72	50.761	ENSLBEG00000022656	raly	72	55.789	Labrus_bergylta
ENSODEG00000011160	-	73	58.163	ENSLACG00000008596	RALY	66	59.259	Latimeria_chalumnae
ENSODEG00000011160	-	76	58.911	ENSLOCG00000007219	raly	67	62.234	Lepisosteus_oculatus
ENSODEG00000011160	-	100	62.937	ENSLAFG00000000321	RALY	91	62.937	Loxodonta_africana
ENSODEG00000011160	-	100	69.173	ENSMFAG00000033131	RALY	91	71.161	Macaca_fascicularis
ENSODEG00000011160	-	100	65.714	ENSMMUG00000018093	RALY	91	65.714	Macaca_mulatta
ENSODEG00000011160	-	100	70.076	ENSMNEG00000044988	RALY	91	70.076	Macaca_nemestrina
ENSODEG00000011160	-	100	68.914	ENSMLEG00000028900	RALY	91	69.776	Mandrillus_leucophaeus
ENSODEG00000011160	-	70	61.404	ENSMAMG00000012529	raly	51	61.988	Mastacembelus_armatus
ENSODEG00000011160	-	70	60.819	ENSMZEG00005016550	raly	55	61.404	Maylandia_zebra
ENSODEG00000011160	-	100	54.093	ENSMGAG00000002214	RALY	91	52.899	Meleagris_gallopavo
ENSODEG00000011160	-	75	82.065	ENSMAUG00000005739	Raly	84	81.461	Mesocricetus_auratus
ENSODEG00000011160	-	100	70.342	ENSMICG00000039074	RALY	90	68.441	Microcebus_murinus
ENSODEG00000011160	-	100	71.273	ENSMOCG00000009450	Raly	91	71.636	Microtus_ochrogaster
ENSODEG00000011160	-	73	51.515	ENSMMOG00000013788	raly	72	56.614	Mola_mola
ENSODEG00000011160	-	70	59.898	ENSMODG00000002819	-	68	59.898	Monodelphis_domestica
ENSODEG00000011160	-	100	71.375	MGP_CAROLIEiJ_G0024519	Raly	84	81.461	Mus_caroli
ENSODEG00000011160	-	100	71.004	ENSMUSG00000027593	Raly	84	81.461	Mus_musculus
ENSODEG00000011160	-	100	71.111	MGP_PahariEiJ_G0025963	Raly	84	81.461	Mus_pahari
ENSODEG00000011160	-	100	71.481	MGP_SPRETEiJ_G0025441	Raly	84	81.461	Mus_spretus
ENSODEG00000011160	-	100	66.667	ENSMPUG00000017820	RALY	91	69.925	Mustela_putorius_furo
ENSODEG00000011160	-	100	62.214	ENSMLUG00000027895	-	88	61.832	Myotis_lucifugus
ENSODEG00000011160	-	100	73.200	ENSMLUG00000005330	-	90	73.200	Myotis_lucifugus
ENSODEG00000011160	-	75	81.522	ENSNGAG00000001263	Raly	84	80.899	Nannospalax_galili
ENSODEG00000011160	-	70	60.819	ENSNBRG00000014761	raly	58	61.628	Neolamprologus_brichardi
ENSODEG00000011160	-	89	61.111	ENSNLEG00000010031	-	86	60.084	Nomascus_leucogenys
ENSODEG00000011160	-	100	67.025	ENSOPRG00000008423	RALY	91	67.025	Ochotona_princeps
ENSODEG00000011160	-	70	54.737	ENSONIG00000004416	raly	65	55.263	Oreochromis_niloticus
ENSODEG00000011160	-	100	65.979	ENSOCUG00000000477	RALY	79	65.636	Oryctolagus_cuniculus
ENSODEG00000011160	-	100	60.000	ENSOGAG00000032337	RALY	91	61.053	Otolemur_garnettii
ENSODEG00000011160	-	100	65.591	ENSOARG00000008957	RALY	91	67.742	Ovis_aries
ENSODEG00000011160	-	100	69.962	ENSPPAG00000034951	RALY	91	70.076	Pan_paniscus
ENSODEG00000011160	-	100	70.722	ENSPPRG00000014593	RALY	90	68.441	Panthera_pardus
ENSODEG00000011160	-	100	70.722	ENSPTIG00000021910	RALY	90	68.441	Panthera_tigris_altaica
ENSODEG00000011160	-	100	70.455	ENSPTRG00000013410	RALY	91	70.455	Pan_troglodytes
ENSODEG00000011160	-	100	68.914	ENSPANG00000018093	RALY	91	69.776	Papio_anubis
ENSODEG00000011160	-	99	49.421	ENSPKIG00000004894	raly	68	58.947	Paramormyrops_kingsleyae
ENSODEG00000011160	-	74	52.381	ENSPSIG00000017714	RALY	69	53.202	Pelodiscus_sinensis
ENSODEG00000011160	-	94	68.992	ENSPEMG00000021466	Raly	91	67.442	Peromyscus_maniculatus_bairdii
ENSODEG00000011160	-	100	51.908	ENSPCIG00000011153	-	67	62.766	Phascolarctos_cinereus
ENSODEG00000011160	-	100	65.000	ENSPPYG00000010932	RALY	91	64.643	Pongo_abelii
ENSODEG00000011160	-	94	60.294	ENSPCAG00000016867	RALY	91	58.824	Procavia_capensis
ENSODEG00000011160	-	100	70.722	ENSPCOG00000016363	RALY	90	68.441	Propithecus_coquereli
ENSODEG00000011160	-	100	68.797	ENSPVAG00000015827	RALY	91	68.797	Pteropus_vampyrus
ENSODEG00000011160	-	70	61.404	ENSPNYG00000011247	raly	55	61.988	Pundamilia_nyererei
ENSODEG00000011160	-	76	57.143	ENSPNAG00000011812	raly	67	59.574	Pygocentrus_nattereri
ENSODEG00000011160	-	100	71.269	ENSRNOG00000017405	Raly	91	70.149	Rattus_norvegicus
ENSODEG00000011160	-	100	68.015	ENSRBIG00000030203	RALY	91	68.498	Rhinopithecus_bieti
ENSODEG00000011160	-	100	68.382	ENSRROG00000038781	RALY	91	68.498	Rhinopithecus_roxellana
ENSODEG00000011160	-	100	70.566	ENSSBOG00000001418	RALY	91	69.434	Saimiri_boliviensis_boliviensis
ENSODEG00000011160	-	100	51.894	ENSSHAG00000016830	RALY	59	68.023	Sarcophilus_harrisii
ENSODEG00000011160	-	76	55.665	ENSSFOG00015012304	raly	71	58.639	Scleropages_formosus
ENSODEG00000011160	-	70	59.649	ENSSMAG00000001107	raly	58	60.234	Scophthalmus_maximus
ENSODEG00000011160	-	70	55.263	ENSSDUG00000002411	raly	63	55.789	Seriola_dumerili
ENSODEG00000011160	-	70	52.941	ENSSLDG00000017872	raly	62	56.684	Seriola_lalandi_dorsalis
ENSODEG00000011160	-	100	51.971	ENSSARG00000002763	-	91	51.971	Sorex_araneus
ENSODEG00000011160	-	74	63.819	ENSSPUG00000006251	RALY	74	65.445	Sphenodon_punctatus
ENSODEG00000011160	-	52	53.846	ENSSPAG00000022480	-	66	52.907	Stegastes_partitus
ENSODEG00000011160	-	100	66.197	ENSSSCG00000007275	RALY	91	64.085	Sus_scrofa
ENSODEG00000011160	-	70	62.434	ENSTGUG00000003715	RALY	87	66.138	Taeniopygia_guttata
ENSODEG00000011160	-	100	59.717	ENSTBEG00000009812	RALY	91	60.071	Tupaia_belangeri
ENSODEG00000011160	-	100	64.286	ENSTTRG00000006590	RALY	91	61.786	Tursiops_truncatus
ENSODEG00000011160	-	96	73.333	ENSUAMG00000006993	RALY	89	73.333	Ursus_americanus
ENSODEG00000011160	-	100	70.677	ENSUMAG00000024106	RALY	91	70.677	Ursus_maritimus
ENSODEG00000011160	-	65	81.250	ENSVPAG00000000373	RALY	59	81.250	Vicugna_pacos
ENSODEG00000011160	-	100	70.677	ENSVVUG00000004546	RALY	91	70.677	Vulpes_vulpes
ENSODEG00000011160	-	95	49.064	ENSXETG00000019514	raly	69	56.436	Xenopus_tropicalis