EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000011211 (Gene tree)
Gene ID: 101578063
Gene Symbol: LRPPRC
Alias: -
Full Name: leucine rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 116482 bases
Position: chrJH651535.1:12992284-13108765
Accession: 101578063
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000015182	PPR	PF01535.20	1.8e-32	1	6
ENSODEP00000015182	PPR	PF01535.20	1.8e-32	2	6
ENSODEP00000015182	PPR	PF01535.20	1.8e-32	3	6
ENSODEP00000015182	PPR	PF01535.20	1.8e-32	4	6
ENSODEP00000015182	PPR	PF01535.20	1.8e-32	5	6
ENSODEP00000015182	PPR	PF01535.20	1.8e-32	6	6

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000015381	LRPPRC-201	4179	XM_004627661	ENSODEP00000015182	1392 (aa)	XP_004627718	-

Gene Model

Click here to download ENSODEG00000011211's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000011211's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000011211	LRPPRC	99	50.526	ENSAPOG00000016610	lrpprc	99	50.526	Acanthochromis_polyacanthus
ENSODEG00000011211	LRPPRC	98	80.879	ENSAMEG00000005852	LRPPRC	100	80.879	Ailuropoda_melanoleuca
ENSODEG00000011211	LRPPRC	99	48.791	ENSACIG00000009604	lrpprc	99	48.862	Amphilophus_citrinellus
ENSODEG00000011211	LRPPRC	99	50.280	ENSAOCG00000005886	lrpprc	94	51.694	Amphiprion_ocellaris
ENSODEG00000011211	LRPPRC	99	47.887	ENSAPEG00000002937	lrpprc	94	48.404	Amphiprion_percula
ENSODEG00000011211	LRPPRC	92	55.711	ENSATEG00000010555	lrpprc	98	55.711	Anabas_testudineus
ENSODEG00000011211	LRPPRC	96	61.510	ENSACAG00000029278	LRPPRC	99	60.142	Anolis_carolinensis
ENSODEG00000011211	LRPPRC	100	77.897	ENSANAG00000027440	LRPPRC	99	78.208	Aotus_nancymaae
ENSODEG00000011211	LRPPRC	96	50.185	ENSACLG00000023712	lrpprc	98	50.185	Astatotilapia_calliptera
ENSODEG00000011211	LRPPRC	99	78.495	ENSCJAG00000000794	LRPPRC	99	78.566	Callithrix_jacchus
ENSODEG00000011211	LRPPRC	99	81.452	ENSCHIG00000020173	LRPPRC	99	81.452	Capra_hircus
ENSODEG00000011211	LRPPRC	96	67.500	ENSCAPG00000013631	LRPPRC	100	67.500	Cavia_aperea
ENSODEG00000011211	LRPPRC	87	86.888	ENSCPOG00000000204	LRPPRC	100	86.888	Cavia_porcellus
ENSODEG00000011211	LRPPRC	99	78.448	ENSCCAG00000031900	LRPPRC	99	78.448	Cebus_capucinus
ENSODEG00000011211	LRPPRC	99	78.376	ENSCATG00000014187	LRPPRC	99	78.368	Cercocebus_atys
ENSODEG00000011211	LRPPRC	99	87.464	ENSCLAG00000005203	LRPPRC	99	87.464	Chinchilla_lanigera
ENSODEG00000011211	LRPPRC	99	79.167	ENSCSAG00000013233	LRPPRC	99	79.167	Chlorocebus_sabaeus
ENSODEG00000011211	LRPPRC	84	78.261	ENSCHOG00000003631	LRPPRC	84	78.261	Choloepus_hoffmanni
ENSODEG00000011211	LRPPRC	99	75.250	ENSCANG00000034961	LRPPRC	99	83.408	Colobus_angolensis_palliatus
ENSODEG00000011211	LRPPRC	100	77.889	ENSCGRG00001016261	Lrpprc	100	77.889	Cricetulus_griseus_chok1gshd
ENSODEG00000011211	LRPPRC	100	77.889	ENSCGRG00000004072	Lrpprc	100	77.889	Cricetulus_griseus_crigri
ENSODEG00000011211	LRPPRC	99	41.696	ENSCSEG00000003850	lrpprc	96	41.772	Cynoglossus_semilaevis
ENSODEG00000011211	LRPPRC	99	50.564	ENSCVAG00000012967	lrpprc	95	51.168	Cyprinodon_variegatus
ENSODEG00000011211	LRPPRC	99	48.673	ENSDARG00000043970	lrpprc	98	48.288	Danio_rerio
ENSODEG00000011211	LRPPRC	82	57.642	ENSDNOG00000032336	-	100	57.642	Dasypus_novemcinctus
ENSODEG00000011211	LRPPRC	100	78.653	ENSDNOG00000012594	-	100	78.725	Dasypus_novemcinctus
ENSODEG00000011211	LRPPRC	100	81.420	ENSDORG00000012233	Lrpprc	100	81.420	Dipodomys_ordii
ENSODEG00000011211	LRPPRC	99	76.813	ENSETEG00000006657	LRPPRC	99	76.813	Echinops_telfairi
ENSODEG00000011211	LRPPRC	87	69.076	ENSEEUG00000012340	LRPPRC	92	69.076	Erinaceus_europaeus
ENSODEG00000011211	LRPPRC	96	49.406	ENSELUG00000012803	lrpprc	98	49.406	Esox_lucius
ENSODEG00000011211	LRPPRC	99	82.484	ENSFCAG00000013468	LRPPRC	99	82.484	Felis_catus
ENSODEG00000011211	LRPPRC	96	55.771	ENSFALG00000012738	LRPPRC	99	55.771	Ficedula_albicollis
ENSODEG00000011211	LRPPRC	100	81.844	ENSFDAG00000015328	LRPPRC	100	81.844	Fukomys_damarensis
ENSODEG00000011211	LRPPRC	99	49.579	ENSFHEG00000019604	lrpprc	94	50.962	Fundulus_heteroclitus
ENSODEG00000011211	LRPPRC	99	47.923	ENSGMOG00000008337	lrpprc	96	48.770	Gadus_morhua
ENSODEG00000011211	LRPPRC	99	49.404	ENSGAFG00000001455	lrpprc	99	49.402	Gambusia_affinis
ENSODEG00000011211	LRPPRC	99	49.359	ENSGACG00000010679	lrpprc	99	50.037	Gasterosteus_aculeatus
ENSODEG00000011211	LRPPRC	95	52.222	ENSHBUG00000000393	lrpprc	92	52.222	Haplochromis_burtoni
ENSODEG00000011211	LRPPRC	100	84.775	ENSHGLG00000006123	LRPPRC	100	84.775	Heterocephalus_glaber_female
ENSODEG00000011211	LRPPRC	60	86.194	ENSHGLG00100005960	-	100	86.194	Heterocephalus_glaber_male
ENSODEG00000011211	LRPPRC	96	49.219	ENSHCOG00000002107	lrpprc	97	49.082	Hippocampus_comes
ENSODEG00000011211	LRPPRC	99	50.910	ENSIPUG00000009406	lrpprc	94	52.059	Ictalurus_punctatus
ENSODEG00000011211	LRPPRC	100	83.297	ENSSTOG00000011185	LRPPRC	100	83.082	Ictidomys_tridecemlineatus
ENSODEG00000011211	LRPPRC	100	79.023	ENSJJAG00000020475	Lrpprc	100	79.023	Jaculus_jaculus
ENSODEG00000011211	LRPPRC	97	48.105	ENSKMAG00000003287	lrpprc	82	48.105	Kryptolebias_marmoratus
ENSODEG00000011211	LRPPRC	99	45.359	ENSLBEG00000023225	lrpprc	96	54.813	Labrus_bergylta
ENSODEG00000011211	LRPPRC	99	60.504	ENSLACG00000014030	LRPPRC	99	60.309	Latimeria_chalumnae
ENSODEG00000011211	LRPPRC	99	56.281	ENSLOCG00000016390	lrpprc	92	57.476	Lepisosteus_oculatus
ENSODEG00000011211	LRPPRC	99	73.801	ENSLAFG00000008614	LRPPRC	99	73.801	Loxodonta_africana
ENSODEG00000011211	LRPPRC	99	78.305	ENSMFAG00000041560	LRPPRC	99	82.511	Macaca_fascicularis
ENSODEG00000011211	LRPPRC	99	77.194	ENSMMUG00000019841	LRPPRC	99	82.511	Macaca_mulatta
ENSODEG00000011211	LRPPRC	99	78.520	ENSMNEG00000031613	LRPPRC	99	78.520	Macaca_nemestrina
ENSODEG00000011211	LRPPRC	98	47.323	ENSMAMG00000021835	lrpprc	95	48.519	Mastacembelus_armatus
ENSODEG00000011211	LRPPRC	95	52.148	ENSMZEG00005027379	lrpprc	94	52.148	Maylandia_zebra
ENSODEG00000011211	LRPPRC	100	77.387	ENSMAUG00000012118	Lrpprc	100	77.387	Mesocricetus_auratus
ENSODEG00000011211	LRPPRC	99	80.891	ENSMICG00000010486	LRPPRC	99	80.891	Microcebus_murinus
ENSODEG00000011211	LRPPRC	100	79.770	ENSMOCG00000006048	Lrpprc	100	79.770	Microtus_ochrogaster
ENSODEG00000011211	LRPPRC	99	48.561	ENSMMOG00000007830	lrpprc	99	53.346	Mola_mola
ENSODEG00000011211	LRPPRC	96	68.441	ENSMODG00000000648	LRPPRC	99	68.441	Monodelphis_domestica
ENSODEG00000011211	LRPPRC	99	48.978	ENSMALG00000001271	lrpprc	99	48.978	Monopterus_albus
ENSODEG00000011211	LRPPRC	99	79.513	ENSMPUG00000011800	LRPPRC	99	82.017	Mustela_putorius_furo
ENSODEG00000011211	LRPPRC	99	80.416	ENSMLUG00000010575	LRPPRC	99	80.416	Myotis_lucifugus
ENSODEG00000011211	LRPPRC	100	79.899	ENSNGAG00000013069	Lrpprc	100	79.899	Nannospalax_galili
ENSODEG00000011211	LRPPRC	94	48.710	ENSNBRG00000013202	lrpprc	98	54.000	Neolamprologus_brichardi
ENSODEG00000011211	LRPPRC	99	77.161	ENSNLEG00000016782	LRPPRC	99	78.748	Nomascus_leucogenys
ENSODEG00000011211	LRPPRC	93	74.490	ENSOPRG00000016774	LRPPRC	93	74.490	Ochotona_princeps
ENSODEG00000011211	LRPPRC	99	50.993	ENSONIG00000000917	lrpprc	99	50.999	Oreochromis_niloticus
ENSODEG00000011211	LRPPRC	54	61.799	ENSOANG00000014670	-	100	62.078	Ornithorhynchus_anatinus
ENSODEG00000011211	LRPPRC	99	81.622	ENSOCUG00000015046	LRPPRC	96	81.694	Oryctolagus_cuniculus
ENSODEG00000011211	LRPPRC	96	49.145	ENSORLG00000004605	lrpprc	98	47.541	Oryzias_latipes
ENSODEG00000011211	LRPPRC	92	51.546	ENSORLG00020012536	lrpprc	99	50.753	Oryzias_latipes_hni
ENSODEG00000011211	LRPPRC	99	48.000	ENSORLG00015018270	lrpprc	95	49.004	Oryzias_latipes_hsok
ENSODEG00000011211	LRPPRC	100	77.937	ENSOGAG00000012798	LRPPRC	100	77.937	Otolemur_garnettii
ENSODEG00000011211	LRPPRC	99	81.766	ENSOARG00000006522	LRPPRC	99	81.766	Ovis_aries
ENSODEG00000011211	LRPPRC	99	75.484	ENSPPAG00000040876	LRPPRC	99	76.604	Pan_paniscus
ENSODEG00000011211	LRPPRC	99	82.197	ENSPPRG00000006578	LRPPRC	99	82.197	Panthera_pardus
ENSODEG00000011211	LRPPRC	97	82.605	ENSPTIG00000000933	LRPPRC	97	82.605	Panthera_tigris_altaica
ENSODEG00000011211	LRPPRC	99	77.810	ENSPTRG00000011880	LRPPRC	99	77.989	Pan_troglodytes
ENSODEG00000011211	LRPPRC	99	77.874	ENSPANG00000020731	LRPPRC	99	77.989	Papio_anubis
ENSODEG00000011211	LRPPRC	90	56.726	ENSPKIG00000022232	lrpprc	96	56.726	Paramormyrops_kingsleyae
ENSODEG00000011211	LRPPRC	61	64.037	ENSPSIG00000006830	-	99	64.037	Pelodiscus_sinensis
ENSODEG00000011211	LRPPRC	67	44.776	ENSPMGG00000016597	lrpprc	96	44.776	Periophthalmus_magnuspinnatus
ENSODEG00000011211	LRPPRC	94	44.631	ENSPMAG00000002147	lrpprc	99	44.631	Petromyzon_marinus
ENSODEG00000011211	LRPPRC	99	49.296	ENSPFOG00000011227	lrpprc	99	49.465	Poecilia_formosa
ENSODEG00000011211	LRPPRC	99	49.085	ENSPLAG00000004018	lrpprc	99	49.082	Poecilia_latipinna
ENSODEG00000011211	LRPPRC	99	49.366	ENSPMEG00000016425	lrpprc	99	49.364	Poecilia_mexicana
ENSODEG00000011211	LRPPRC	99	49.050	ENSPREG00000003662	lrpprc	99	49.047	Poecilia_reticulata
ENSODEG00000011211	LRPPRC	58	76.961	ENSPPYG00000029532	-	100	76.961	Pongo_abelii
ENSODEG00000011211	LRPPRC	83	73.921	ENSPCAG00000001430	LRPPRC	84	73.921	Procavia_capensis
ENSODEG00000011211	LRPPRC	99	78.966	ENSPVAG00000002007	LRPPRC	99	78.966	Pteropus_vampyrus
ENSODEG00000011211	LRPPRC	94	49.773	ENSPNYG00000000756	lrpprc	94	49.773	Pundamilia_nyererei
ENSODEG00000011211	LRPPRC	99	52.838	ENSPNAG00000002895	lrpprc	99	52.739	Pygocentrus_nattereri
ENSODEG00000011211	LRPPRC	100	78.033	ENSRNOG00000005877	Lrpprc	100	78.105	Rattus_norvegicus
ENSODEG00000011211	LRPPRC	99	76.764	ENSRBIG00000031552	LRPPRC	99	76.819	Rhinopithecus_bieti
ENSODEG00000011211	LRPPRC	99	77.658	ENSSBOG00000011807	LRPPRC	99	77.730	Saimiri_boliviensis_boliviensis
ENSODEG00000011211	LRPPRC	96	65.604	ENSSHAG00000018725	LRPPRC	99	65.604	Sarcophilus_harrisii
ENSODEG00000011211	LRPPRC	99	50.381	ENSSFOG00015001042	lrpprc	99	50.243	Scleropages_formosus
ENSODEG00000011211	LRPPRC	99	50.635	ENSSDUG00000019062	lrpprc	99	50.635	Seriola_dumerili
ENSODEG00000011211	LRPPRC	99	44.128	ENSSLDG00000023028	lrpprc	99	44.246	Seriola_lalandi_dorsalis
ENSODEG00000011211	LRPPRC	87	69.662	ENSSARG00000000426	LRPPRC	100	69.662	Sorex_araneus
ENSODEG00000011211	LRPPRC	99	47.018	ENSSPAG00000000162	lrpprc	95	47.867	Stegastes_partitus
ENSODEG00000011211	LRPPRC	99	81.120	ENSSSCG00000008452	LRPPRC	99	81.120	Sus_scrofa
ENSODEG00000011211	LRPPRC	94	55.598	ENSTGUG00000003759	LRPPRC	99	55.598	Taeniopygia_guttata
ENSODEG00000011211	LRPPRC	91	50.803	ENSTRUG00000008409	lrpprc	91	52.195	Takifugu_rubripes
ENSODEG00000011211	LRPPRC	99	49.574	ENSTNIG00000007470	lrpprc	99	50.368	Tetraodon_nigroviridis
ENSODEG00000011211	LRPPRC	99	78.679	ENSTTRG00000006403	LRPPRC	99	78.679	Tursiops_truncatus
ENSODEG00000011211	LRPPRC	96	76.194	ENSVPAG00000008993	LRPPRC	99	76.194	Vicugna_pacos
ENSODEG00000011211	LRPPRC	99	59.687	ENSXETG00000009296	lrpprc	99	59.473	Xenopus_tropicalis
ENSODEG00000011211	LRPPRC	99	45.500	ENSXCOG00000013343	lrpprc	95	52.705	Xiphophorus_couchianus
ENSODEG00000011211	LRPPRC	97	50.182	ENSXMAG00000018108	lrpprc	95	50.182	Xiphophorus_maculatus