EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000011248 (Gene tree)
Gene ID: 101563816
Gene Symbol: -
Alias: -
Full Name: RAB1A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 23572 bases
Position: chrJH651593.1:4223752-4247323
Accession: 101563816
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000015228	MMR_HSR1	PF01926.23	1.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000015427	-	600	XM_004636148	ENSODEP00000015228	199 (aa)	XP_004636205	-

Gene Model

Click here to download ENSODEG00000011248's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000011248's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000011248	-	82	35.583	ENSODEG00000016056	RAB23	67	36.250
ENSODEG00000011248	-	79	38.650	ENSODEG00000009016	RAB36	54	39.375
ENSODEG00000011248	-	81	42.857	ENSODEG00000019065	-	84	42.405
ENSODEG00000011248	-	58	31.092	ENSODEG00000019069	-	59	31.034
ENSODEG00000011248	-	97	37.931	ENSODEG00000005942	RAB6A	91	37.824
ENSODEG00000011248	-	84	32.143	ENSODEG00000009963	RHEB	89	32.727
ENSODEG00000011248	-	80	47.273	ENSODEG00000011726	RAB33A	68	48.148
ENSODEG00000011248	-	94	45.213	ENSODEG00000002013	RAB14	86	45.699
ENSODEG00000011248	-	96	51.042	ENSODEG00000010443	-	92	50.265
ENSODEG00000011248	-	83	44.643	ENSODEG00000000520	RAB39B	77	44.848
ENSODEG00000011248	-	96	46.114	ENSODEG00000001343	RAB2B	88	46.597
ENSODEG00000011248	-	81	40.476	ENSODEG00000002594	-	58	40.854
ENSODEG00000011248	-	89	33.696	ENSODEG00000009994	RERG	88	33.889
ENSODEG00000011248	-	79	39.375	ENSODEG00000012270	RAB34	61	40.127
ENSODEG00000011248	-	77	34.194	ENSODEG00000018151	MRAS	77	35.802
ENSODEG00000011248	-	76	36.842	ENSODEG00000010412	KRAS	93	35.795
ENSODEG00000011248	-	58	32.773	ENSODEG00000014792	ARL2-SNX15	59	31.897
ENSODEG00000011248	-	89	47.191	ENSODEG00000002369	-	95	44.776
ENSODEG00000011248	-	58	30.769	ENSODEG00000006469	ARL4A	57	31.579
ENSODEG00000011248	-	96	92.708	ENSODEG00000017847	-	94	92.593
ENSODEG00000011248	-	96	44.554	ENSODEG00000011371	RAB11B	91	44.724
ENSODEG00000011248	-	78	32.919	ENSODEG00000010425	RAB24	77	34.810
ENSODEG00000011248	-	96	37.500	ENSODEG00000000054	RAB22A	95	37.566
ENSODEG00000011248	-	96	43.005	ENSODEG00000017920	RAB5C	87	42.632
ENSODEG00000011248	-	78	50.968	ENSODEG00000013827	RAB15	72	50.000
ENSODEG00000011248	-	82	50.610	ENSODEG00000006414	RAB12	83	47.514
ENSODEG00000011248	-	80	33.333	ENSODEG00000015703	HRAS	90	34.302
ENSODEG00000011248	-	58	32.759	ENSODEG00000009293	ARL8B	59	31.858
ENSODEG00000011248	-	96	53.646	ENSODEG00000007219	RAB35	94	53.439
ENSODEG00000011248	-	76	37.500	ENSODEG00000007937	NRAS	85	38.889
ENSODEG00000011248	-	96	45.312	ENSODEG00000004150	-	90	45.503
ENSODEG00000011248	-	58	65.217	ENSODEG00000012634	-	88	64.286
ENSODEG00000011248	-	81	51.553	ENSODEG00000016878	-	91	45.685
ENSODEG00000011248	-	65	30.147	ENSODEG00000020552	ARL4D	67	31.343
ENSODEG00000011248	-	95	32.161	ENSODEG00000015650	-	85	32.821
ENSODEG00000011248	-	96	42.784	ENSODEG00000003860	RAB5B	87	42.408
ENSODEG00000011248	-	80	49.686	ENSODEG00000003833	RAB30	77	50.000
ENSODEG00000011248	-	80	44.242	ENSODEG00000002979	RAB33B	71	45.062
ENSODEG00000011248	-	75	37.908	ENSODEG00000002835	RAB7A	92	38.667
ENSODEG00000011248	-	62	50.407	ENSODEG00000000290	-	81	50.000
ENSODEG00000011248	-	76	38.462	ENSODEG00000019004	RAB9A	76	38.562
ENSODEG00000011248	-	80	47.170	ENSODEG00000009908	RAB25	73	47.436
ENSODEG00000011248	-	58	35.345	ENSODEG00000011676	ARL8A	59	34.513
ENSODEG00000011248	-	95	44.737	ENSODEG00000016788	-	89	47.159
ENSODEG00000011248	-	58	31.624	ENSODEG00000019668	ARL4C	59	32.456

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000011248	-	96	100.000	ENSG00000138069	RAB1A	94	100.000	Homo_sapiens
ENSODEG00000011248	-	96	95.312	ENSAPOG00000008143	-	94	95.238	Acanthochromis_polyacanthus
ENSODEG00000011248	-	96	100.000	ENSAMEG00000001127	RAB1A	94	100.000	Ailuropoda_melanoleuca
ENSODEG00000011248	-	96	95.312	ENSAOCG00000020606	-	95	95.238	Amphiprion_ocellaris
ENSODEG00000011248	-	96	95.312	ENSAPEG00000022488	-	94	95.238	Amphiprion_percula
ENSODEG00000011248	-	96	100.000	ENSANAG00000020929	RAB1A	94	100.000	Aotus_nancymaae
ENSODEG00000011248	-	96	95.833	ENSACLG00000003326	-	94	95.767	Astatotilapia_calliptera
ENSODEG00000011248	-	96	94.271	ENSAMXG00000034850	-	94	94.180	Astyanax_mexicanus
ENSODEG00000011248	-	96	100.000	ENSBTAG00000016720	RAB1A	97	100.000	Bos_taurus
ENSODEG00000011248	-	96	100.000	ENSCJAG00000046275	RAB1A	97	100.000	Callithrix_jacchus
ENSODEG00000011248	-	96	100.000	ENSCAFG00000003187	RAB1A	94	100.000	Canis_familiaris
ENSODEG00000011248	-	96	100.000	ENSCAFG00020026971	RAB1A	94	100.000	Canis_lupus_dingo
ENSODEG00000011248	-	96	100.000	ENSCHIG00000014060	RAB1A	94	100.000	Capra_hircus
ENSODEG00000011248	-	96	100.000	ENSTSYG00000005996	RAB1A	97	100.000	Carlito_syrichta
ENSODEG00000011248	-	96	100.000	ENSCPOG00000015437	RAB1A	94	100.000	Cavia_porcellus
ENSODEG00000011248	-	96	100.000	ENSCCAG00000021869	RAB1A	94	100.000	Cebus_capucinus
ENSODEG00000011248	-	96	100.000	ENSCATG00000030853	RAB1A	95	100.000	Cercocebus_atys
ENSODEG00000011248	-	96	100.000	ENSCLAG00000014766	RAB1A	99	95.588	Chinchilla_lanigera
ENSODEG00000011248	-	96	99.479	ENSCPBG00000013243	RAB1A	94	99.479	Chrysemys_picta_bellii
ENSODEG00000011248	-	96	97.396	ENSCANG00000035916	RAB1A	96	97.396	Colobus_angolensis_palliatus
ENSODEG00000011248	-	100	97.030	ENSCGRG00001012691	-	99	97.030	Cricetulus_griseus_chok1gshd
ENSODEG00000011248	-	100	97.030	ENSCGRG00000008456	-	99	97.030	Cricetulus_griseus_crigri
ENSODEG00000011248	-	96	100.000	ENSDNOG00000018236	RAB1A	94	100.000	Dasypus_novemcinctus
ENSODEG00000011248	-	96	100.000	ENSDORG00000028628	-	94	100.000	Dipodomys_ordii
ENSODEG00000011248	-	96	83.938	FBgn0285937	Rab1	92	83.684	Drosophila_melanogaster
ENSODEG00000011248	-	96	100.000	ENSETEG00000002205	RAB1A	95	100.000	Echinops_telfairi
ENSODEG00000011248	-	96	100.000	ENSEASG00005007298	RAB1A	94	100.000	Equus_asinus_asinus
ENSODEG00000011248	-	96	100.000	ENSECAG00000009926	RAB1A	94	100.000	Equus_caballus
ENSODEG00000011248	-	96	100.000	ENSEEUG00000011721	RAB1A	95	100.000	Erinaceus_europaeus
ENSODEG00000011248	-	96	95.361	ENSELUG00000012166	RAB1A	90	95.288	Esox_lucius
ENSODEG00000011248	-	96	100.000	ENSFCAG00000002536	RAB1A	94	100.000	Felis_catus
ENSODEG00000011248	-	96	99.479	ENSFALG00000013624	RAB1A	94	99.479	Ficedula_albicollis
ENSODEG00000011248	-	100	97.487	ENSFDAG00000019505	-	100	97.487	Fukomys_damarensis
ENSODEG00000011248	-	96	94.271	ENSFHEG00000014414	-	94	94.180	Fundulus_heteroclitus
ENSODEG00000011248	-	96	99.479	ENSGALG00000031582	RAB1A	94	99.479	Gallus_gallus
ENSODEG00000011248	-	96	94.271	ENSGAFG00000000918	-	94	94.180	Gambusia_affinis
ENSODEG00000011248	-	96	99.479	ENSGAGG00000006802	RAB1A	94	99.479	Gopherus_agassizii
ENSODEG00000011248	-	96	100.000	ENSGGOG00000026603	RAB1A	97	100.000	Gorilla_gorilla
ENSODEG00000011248	-	96	100.000	ENSHGLG00000013585	RAB1A	94	100.000	Heterocephalus_glaber_female
ENSODEG00000011248	-	96	100.000	ENSHGLG00100007994	RAB1A	94	100.000	Heterocephalus_glaber_male
ENSODEG00000011248	-	96	100.000	ENSSTOG00000020693	-	95	100.000	Ictidomys_tridecemlineatus
ENSODEG00000011248	-	96	100.000	ENSJJAG00000014396	Rab1a	97	100.000	Jaculus_jaculus
ENSODEG00000011248	-	99	93.467	ENSKMAG00000014038	-	90	95.238	Kryptolebias_marmoratus
ENSODEG00000011248	-	96	94.792	ENSLBEG00000028426	RAB1A	94	94.709	Labrus_bergylta
ENSODEG00000011248	-	96	98.958	ENSLACG00000012869	RAB1A	94	98.958	Latimeria_chalumnae
ENSODEG00000011248	-	96	100.000	ENSLAFG00000016666	RAB1A	94	100.000	Loxodonta_africana
ENSODEG00000011248	-	96	100.000	ENSMFAG00000046246	RAB1A	94	100.000	Macaca_fascicularis
ENSODEG00000011248	-	96	100.000	ENSMMUG00000021721	RAB1A	89	100.000	Macaca_mulatta
ENSODEG00000011248	-	91	99.448	ENSMNEG00000028414	-	91	99.448	Macaca_nemestrina
ENSODEG00000011248	-	96	100.000	ENSMLEG00000042535	RAB1A	94	100.000	Mandrillus_leucophaeus
ENSODEG00000011248	-	96	95.833	ENSMZEG00005013959	-	94	95.767	Maylandia_zebra
ENSODEG00000011248	-	96	99.479	ENSMGAG00000004611	RAB1A	95	99.479	Meleagris_gallopavo
ENSODEG00000011248	-	96	99.479	ENSMAUG00000012156	Rab1a	94	99.479	Mesocricetus_auratus
ENSODEG00000011248	-	96	100.000	ENSMICG00000012587	RAB1A	94	100.000	Microcebus_murinus
ENSODEG00000011248	-	96	99.479	ENSMOCG00000017022	Rab1a	95	99.479	Microtus_ochrogaster
ENSODEG00000011248	-	96	93.229	ENSMMOG00000018709	RAB1A	93	93.122	Mola_mola
ENSODEG00000011248	-	96	99.479	ENSMODG00000003340	RAB1A	94	99.479	Monodelphis_domestica
ENSODEG00000011248	-	96	100.000	MGP_CAROLIEiJ_G0016115	Rab1a	94	100.000	Mus_caroli
ENSODEG00000011248	-	96	100.000	ENSMUSG00000020149	Rab1a	95	100.000	Mus_musculus
ENSODEG00000011248	-	96	100.000	MGP_PahariEiJ_G0016776	Rab1a	94	100.000	Mus_pahari
ENSODEG00000011248	-	96	100.000	MGP_SPRETEiJ_G0016958	Rab1a	95	100.000	Mus_spretus
ENSODEG00000011248	-	96	100.000	ENSMPUG00000006139	RAB1A	76	100.000	Mustela_putorius_furo
ENSODEG00000011248	-	96	100.000	ENSMLUG00000009489	RAB1A	94	100.000	Myotis_lucifugus
ENSODEG00000011248	-	96	100.000	ENSNGAG00000005838	Rab1a	94	100.000	Nannospalax_galili
ENSODEG00000011248	-	96	95.833	ENSNBRG00000020492	-	94	95.767	Neolamprologus_brichardi
ENSODEG00000011248	-	96	100.000	ENSOPRG00000006595	RAB1A	97	100.000	Ochotona_princeps
ENSODEG00000011248	-	96	93.750	ENSONIG00000006819	-	93	93.651	Oreochromis_niloticus
ENSODEG00000011248	-	96	99.479	ENSOANG00000012438	RAB1A	94	99.479	Ornithorhynchus_anatinus
ENSODEG00000011248	-	96	100.000	ENSOCUG00000017003	RAB1A	94	100.000	Oryctolagus_cuniculus
ENSODEG00000011248	-	96	100.000	ENSOGAG00000026181	RAB1A	94	100.000	Otolemur_garnettii
ENSODEG00000011248	-	96	100.000	ENSOARG00000019997	RAB1A	95	100.000	Ovis_aries
ENSODEG00000011248	-	96	100.000	ENSPPAG00000030253	RAB1A	95	100.000	Pan_paniscus
ENSODEG00000011248	-	96	100.000	ENSPPRG00000025077	RAB1A	94	100.000	Panthera_pardus
ENSODEG00000011248	-	96	100.000	ENSPTIG00000013471	RAB1A	94	100.000	Panthera_tigris_altaica
ENSODEG00000011248	-	96	100.000	ENSPTRG00000011989	RAB1A	95	100.000	Pan_troglodytes
ENSODEG00000011248	-	96	100.000	ENSPANG00000010485	RAB1A	95	100.000	Papio_anubis
ENSODEG00000011248	-	96	99.479	ENSPSIG00000008028	RAB1A	94	99.479	Pelodiscus_sinensis
ENSODEG00000011248	-	96	95.833	ENSPMGG00000021015	-	92	95.767	Periophthalmus_magnuspinnatus
ENSODEG00000011248	-	96	100.000	ENSPEMG00000009340	Rab1a	94	100.000	Peromyscus_maniculatus_bairdii
ENSODEG00000011248	-	96	99.479	ENSPCIG00000023212	RAB1A	94	99.479	Phascolarctos_cinereus
ENSODEG00000011248	-	96	93.750	ENSPFOG00000000498	-	91	93.651	Poecilia_formosa
ENSODEG00000011248	-	96	93.750	ENSPLAG00000015592	-	94	93.651	Poecilia_latipinna
ENSODEG00000011248	-	96	93.750	ENSPMEG00000005288	-	94	93.651	Poecilia_mexicana
ENSODEG00000011248	-	100	96.535	ENSPPYG00000012360	RAB1A	99	96.535	Pongo_abelii
ENSODEG00000011248	-	96	100.000	ENSPCOG00000017244	RAB1A	94	100.000	Propithecus_coquereli
ENSODEG00000011248	-	96	95.833	ENSPNYG00000015841	-	94	95.767	Pundamilia_nyererei
ENSODEG00000011248	-	96	100.000	ENSRNOG00000004992	Rab1a	94	100.000	Rattus_norvegicus
ENSODEG00000011248	-	96	100.000	ENSSBOG00000023732	RAB1A	94	100.000	Saimiri_boliviensis_boliviensis
ENSODEG00000011248	-	96	99.479	ENSSHAG00000003597	RAB1A	93	99.479	Sarcophilus_harrisii
ENSODEG00000011248	-	96	95.312	ENSSMAG00000021049	-	94	95.238	Scophthalmus_maximus
ENSODEG00000011248	-	96	95.833	ENSSDUG00000022535	RAB1A	94	95.767	Seriola_dumerili
ENSODEG00000011248	-	96	99.479	ENSSPUG00000012822	RAB1A	94	99.479	Sphenodon_punctatus
ENSODEG00000011248	-	96	95.312	ENSSPAG00000012564	-	94	95.238	Stegastes_partitus
ENSODEG00000011248	-	96	100.000	ENSSSCG00000008359	RAB1A	97	100.000	Sus_scrofa
ENSODEG00000011248	-	96	99.479	ENSTGUG00000002328	RAB1A	94	99.479	Taeniopygia_guttata
ENSODEG00000011248	-	96	94.792	ENSTRUG00000024994	RAB1A	94	94.709	Takifugu_rubripes
ENSODEG00000011248	-	96	100.000	ENSUMAG00000021038	RAB1A	96	100.000	Ursus_maritimus
ENSODEG00000011248	-	96	100.000	ENSVPAG00000005640	RAB1A	96	100.000	Vicugna_pacos
ENSODEG00000011248	-	96	100.000	ENSVVUG00000027588	RAB1A	94	100.000	Vulpes_vulpes
ENSODEG00000011248	-	96	94.271	ENSXMAG00000015776	-	94	94.180	Xiphophorus_maculatus