EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000011306 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: GTPase%2C IMAP family member 1
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 20580 bases
Position: chrJH651542.1:5943855-5964434
Accession: 101577404
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000015317	MMR_HSR1	PF01926.23	4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000015516	-	924	-	ENSODEP00000015317	307 (aa)	-	-
ENSODET00000015517	-	123	-	ENSODEP00000015318	41 (aa)	-	-
ENSODET00000015518	-	912	XM_004629005	ENSODEP00000015319	303 (aa)	XP_004629062	-

Gene Model

Click here to download ENSODEG00000011306's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000011306's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000011306	-	64	39.286	ENSODEG00000011969	-	67	39.286
ENSODEG00000011306	-	76	39.076	ENSODEG00000011659	GIMAP4	85	37.405

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000011306	-	94	56.014	ENSG00000196329	GIMAP5	90	57.246	Homo_sapiens
ENSODEG00000011306	-	94	56.075	ENSG00000281887	GIMAP1-GIMAP5	75	57.246	Homo_sapiens
ENSODEG00000011306	-	79	41.803	ENSAPLG00000001066	-	98	41.803	Anas_platyrhynchos
ENSODEG00000011306	-	57	45.143	ENSACAG00000017193	-	78	45.143	Anolis_carolinensis
ENSODEG00000011306	-	57	50.857	ENSACAG00000016862	-	85	50.857	Anolis_carolinensis
ENSODEG00000011306	-	64	46.701	ENSACAG00000028535	-	72	46.701	Anolis_carolinensis
ENSODEG00000011306	-	66	47.692	ENSACAG00000016727	-	73	47.692	Anolis_carolinensis
ENSODEG00000011306	-	91	58.214	ENSBTAG00000000715	-	82	60.606	Bos_taurus
ENSODEG00000011306	-	88	57.249	ENSBTAG00000039588	-	87	58.527	Bos_taurus
ENSODEG00000011306	-	92	57.042	ENSBTAG00000004894	-	93	57.143	Bos_taurus
ENSODEG00000011306	-	94	57.241	ENSCJAG00000020126	-	90	58.696	Callithrix_jacchus
ENSODEG00000011306	-	99	58.033	ENSCAFG00000024817	-	84	59.298	Canis_familiaris
ENSODEG00000011306	-	99	53.770	ENSCAFG00020006487	-	91	54.737	Canis_lupus_dingo
ENSODEG00000011306	-	82	61.265	ENSCHIG00000020434	-	87	60.853	Capra_hircus
ENSODEG00000011306	-	91	56.071	ENSCHIG00000013093	-	87	59.302	Capra_hircus
ENSODEG00000011306	-	92	56.690	ENSCHIG00000000431	-	93	56.794	Capra_hircus
ENSODEG00000011306	-	89	59.191	ENSCHIG00000000607	-	87	60.853	Capra_hircus
ENSODEG00000011306	-	97	60.927	ENSTSYG00000010016	-	92	62.816	Carlito_syrichta
ENSODEG00000011306	-	100	72.816	ENSCAPG00000007631	-	92	75.439	Cavia_aperea
ENSODEG00000011306	-	100	73.139	ENSCPOG00000003376	-	92	75.789	Cavia_porcellus
ENSODEG00000011306	-	94	60.690	ENSCCAG00000009203	-	90	62.319	Cebus_capucinus
ENSODEG00000011306	-	100	73.463	ENSCLAG00000001246	-	92	76.056	Chinchilla_lanigera
ENSODEG00000011306	-	82	79.681	ENSCLAG00000001322	-	78	79.681	Chinchilla_lanigera
ENSODEG00000011306	-	94	59.310	ENSCSAG00000006865	-	85	60.870	Chlorocebus_sabaeus
ENSODEG00000011306	-	57	50.857	ENSCPBG00000005548	-	60	50.857	Chrysemys_picta_bellii
ENSODEG00000011306	-	94	58.966	ENSCANG00000029802	-	90	60.507	Colobus_angolensis_palliatus
ENSODEG00000011306	-	89	58.182	ENSCGRG00001024272	-	84	60.630	Cricetulus_griseus_chok1gshd
ENSODEG00000011306	-	99	54.397	ENSCGRG00001024196	-	92	56.890	Cricetulus_griseus_chok1gshd
ENSODEG00000011306	-	99	54.397	ENSCGRG00000015177	-	92	56.890	Cricetulus_griseus_crigri
ENSODEG00000011306	-	89	57.818	ENSCGRG00000014686	-	84	60.236	Cricetulus_griseus_crigri
ENSODEG00000011306	-	97	62.667	ENSECAG00000029716	-	89	64.516	Equus_caballus
ENSODEG00000011306	-	97	62.000	ENSECAG00000007663	-	89	63.799	Equus_caballus
ENSODEG00000011306	-	94	62.671	ENSECAG00000007668	-	91	64.875	Equus_caballus
ENSODEG00000011306	-	90	56.318	ENSEEUG00000006852	-	91	60.079	Erinaceus_europaeus
ENSODEG00000011306	-	99	59.016	ENSFCAG00000042622	-	91	60.142	Felis_catus
ENSODEG00000011306	-	60	44.086	ENSGAGG00000015825	-	66	44.086	Gopherus_agassizii
ENSODEG00000011306	-	65	48.500	ENSGAGG00000015829	-	94	48.500	Gopherus_agassizii
ENSODEG00000011306	-	94	56.357	ENSGGOG00000014216	-	90	57.609	Gorilla_gorilla
ENSODEG00000011306	-	99	54.426	ENSSTOG00000021076	-	92	56.491	Ictidomys_tridecemlineatus
ENSODEG00000011306	-	60	34.426	ENSKMAG00000007013	-	70	34.197	Kryptolebias_marmoratus
ENSODEG00000011306	-	94	58.621	ENSMFAG00000044951	-	85	60.145	Macaca_fascicularis
ENSODEG00000011306	-	94	57.931	ENSMMUG00000001270	-	82	59.420	Macaca_mulatta
ENSODEG00000011306	-	94	58.276	ENSMNEG00000028821	-	90	59.783	Macaca_nemestrina
ENSODEG00000011306	-	94	58.621	ENSMLEG00000029622	-	90	60.145	Mandrillus_leucophaeus
ENSODEG00000011306	-	97	59.736	ENSMICG00000027282	-	92	60.627	Microcebus_murinus
ENSODEG00000011306	-	95	58.108	ENSMICG00000035983	-	91	60.284	Microcebus_murinus
ENSODEG00000011306	-	86	57.040	ENSMOCG00000018608	-	85	60.079	Microtus_ochrogaster
ENSODEG00000011306	-	73	62.222	ENSMOCG00000002213	-	100	62.222	Microtus_ochrogaster
ENSODEG00000011306	-	97	47.315	ENSMODG00000003669	-	88	48.057	Monodelphis_domestica
ENSODEG00000011306	-	99	54.785	MGP_CAROLIEiJ_G0028355	Gimap3	89	57.455	Mus_caroli
ENSODEG00000011306	-	93	55.709	MGP_CAROLIEiJ_G0028354	Gimap5	86	59.328	Mus_caroli
ENSODEG00000011306	-	79	63.115	ENSMUSG00000039264	Gimap3	81	63.115	Mus_musculus
ENSODEG00000011306	-	86	59.328	ENSMUSG00000043505	Gimap5	86	59.328	Mus_musculus
ENSODEG00000011306	-	88	56.835	MGP_PahariEiJ_G0022105	Gimap3	83	60.400	Mus_pahari
ENSODEG00000011306	-	93	54.671	MGP_PahariEiJ_G0022104	Gimap5	86	58.209	Mus_pahari
ENSODEG00000011306	-	86	56.767	ENSMLUG00000023466	-	92	56.767	Myotis_lucifugus
ENSODEG00000011306	-	66	58.824	ENSMLUG00000025954	-	97	58.824	Myotis_lucifugus
ENSODEG00000011306	-	97	54.153	ENSMLUG00000007287	-	91	55.282	Myotis_lucifugus
ENSODEG00000011306	-	90	53.237	ENSMLUG00000028966	-	89	53.237	Myotis_lucifugus
ENSODEG00000011306	-	76	56.838	ENSMLUG00000026545	-	76	56.838	Myotis_lucifugus
ENSODEG00000011306	-	76	41.525	ENSMLUG00000022809	-	91	41.525	Myotis_lucifugus
ENSODEG00000011306	-	93	60.137	ENSNGAG00000020526	-	88	63.396	Nannospalax_galili
ENSODEG00000011306	-	99	60.328	ENSNGAG00000022013	-	92	61.053	Nannospalax_galili
ENSODEG00000011306	-	94	58.419	ENSNLEG00000003844	-	90	60.145	Nomascus_leucogenys
ENSODEG00000011306	-	88	48.699	ENSMEUG00000016596	-	94	49.027	Notamacropus_eugenii
ENSODEG00000011306	-	88	48.699	ENSMEUG00000000849	-	94	49.027	Notamacropus_eugenii
ENSODEG00000011306	-	97	57.667	ENSOCUG00000005976	-	90	57.895	Oryctolagus_cuniculus
ENSODEG00000011306	-	65	67.164	ENSOCUG00000025892	-	87	67.164	Oryctolagus_cuniculus
ENSODEG00000011306	-	94	56.949	ENSOGAG00000009145	-	87	60.741	Otolemur_garnettii
ENSODEG00000011306	-	97	56.811	ENSOARG00000001589	-	83	58.188	Ovis_aries
ENSODEG00000011306	-	91	59.220	ENSOARG00000001288	-	93	58.885	Ovis_aries
ENSODEG00000011306	-	71	55.288	ENSOARG00000001183	-	90	60.000	Ovis_aries
ENSODEG00000011306	-	91	55.000	ENSOARG00000001645	-	86	57.197	Ovis_aries
ENSODEG00000011306	-	94	56.357	ENSPPAG00000042001	-	90	57.609	Pan_paniscus
ENSODEG00000011306	-	99	58.689	ENSPPRG00000017393	-	91	59.786	Panthera_pardus
ENSODEG00000011306	-	99	58.689	ENSPTIG00000012405	-	91	59.786	Panthera_tigris_altaica
ENSODEG00000011306	-	94	56.701	ENSPTRG00000028356	-	77	57.971	Pan_troglodytes
ENSODEG00000011306	-	94	56.701	ENSPTRG00000034465	GIMAP1	90	57.971	Pan_troglodytes
ENSODEG00000011306	-	94	58.276	ENSPANG00000030896	-	90	59.783	Papio_anubis
ENSODEG00000011306	-	70	45.327	ENSPSIG00000000573	-	90	45.327	Pelodiscus_sinensis
ENSODEG00000011306	-	64	52.551	ENSPSIG00000013467	-	86	52.551	Pelodiscus_sinensis
ENSODEG00000011306	-	61	43.564	ENSPSIG00000006796	-	98	45.050	Pelodiscus_sinensis
ENSODEG00000011306	-	69	43.396	ENSPSIG00000016016	-	68	42.991	Pelodiscus_sinensis
ENSODEG00000011306	-	64	51.777	ENSPSIG00000000508	-	77	51.777	Pelodiscus_sinensis
ENSODEG00000011306	-	98	56.291	ENSPEMG00000019236	-	91	58.273	Peromyscus_maniculatus_bairdii
ENSODEG00000011306	-	95	57.534	ENSPEMG00000014554	-	94	58.246	Peromyscus_maniculatus_bairdii
ENSODEG00000011306	-	89	49.640	ENSPCIG00000008658	-	79	52.157	Phascolarctos_cinereus
ENSODEG00000011306	-	57	46.286	ENSPCIG00000001766	-	62	46.286	Phascolarctos_cinereus
ENSODEG00000011306	-	94	56.701	ENSPPYG00000018173	-	84	57.971	Pongo_abelii
ENSODEG00000011306	-	97	61.438	ENSPCOG00000016811	-	92	62.414	Propithecus_coquereli
ENSODEG00000011306	-	92	53.846	ENSRNOG00000008416	Gimap5	99	50.962	Rattus_norvegicus
ENSODEG00000011306	-	94	59.310	ENSRBIG00000035290	-	90	60.870	Rhinopithecus_bieti
ENSODEG00000011306	-	94	59.310	ENSRROG00000028817	-	85	60.870	Rhinopithecus_roxellana
ENSODEG00000011306	-	94	58.966	ENSSBOG00000032164	-	90	60.507	Saimiri_boliviensis_boliviensis
ENSODEG00000011306	-	72	52.252	ENSSHAG00000000843	-	94	52.252	Sarcophilus_harrisii
ENSODEG00000011306	-	91	52.817	ENSSARG00000004634	-	95	52.817	Sorex_araneus
ENSODEG00000011306	-	57	44.571	ENSSPUG00000009917	-	58	43.386	Sphenodon_punctatus
ENSODEG00000011306	-	65	48.241	ENSSPUG00000010046	-	69	48.241	Sphenodon_punctatus
ENSODEG00000011306	-	90	42.349	ENSSPUG00000009848	-	68	51.269	Sphenodon_punctatus
ENSODEG00000011306	-	87	42.322	ENSSPUG00000010036	-	68	51.777	Sphenodon_punctatus
ENSODEG00000011306	-	66	46.377	ENSSPUG00000014119	-	91	46.377	Sphenodon_punctatus
ENSODEG00000011306	-	62	44.211	ENSSPUG00000009907	-	86	44.211	Sphenodon_punctatus
ENSODEG00000011306	-	65	50.754	ENSSPUG00000009760	-	90	50.754	Sphenodon_punctatus
ENSODEG00000011306	-	64	50.000	ENSSPUG00000009833	-	75	50.000	Sphenodon_punctatus
ENSODEG00000011306	-	65	51.759	ENSSPUG00000010063	-	68	51.759	Sphenodon_punctatus
ENSODEG00000011306	-	95	56.610	ENSSSCG00000039407	-	92	58.363	Sus_scrofa
ENSODEG00000011306	-	97	57.000	ENSTBEG00000000035	-	95	57.895	Tupaia_belangeri
ENSODEG00000011306	-	74	67.105	ENSTTRG00000011008	-	95	67.105	Tursiops_truncatus
ENSODEG00000011306	-	94	60.068	ENSTTRG00000003204	-	98	60.279	Tursiops_truncatus
ENSODEG00000011306	-	99	56.863	ENSUMAG00000018133	-	89	60.769	Ursus_maritimus
ENSODEG00000011306	-	95	57.860	ENSVPAG00000011693	-	91	59.717	Vicugna_pacos