EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000011490 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 628 bases
Position: chrJH651588.1:1752702-1753329
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000015561	RNA_pol_Rpb5_N	PF03871.14	4.3e-22	1	1
ENSODEP00000015561	RNA_pol_Rpb5_C	PF01191.19	4.1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000015762	-	510	-	ENSODEP00000015561	169 (aa)	-	-

Gene Model

Click here to download ENSODEG00000011490's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000011490's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000011490	-	100	72.381	ENSODEG00000013230	-	100	72.381
ENSODEG00000011490	-	86	62.162	ENSODEG00000007985	-	100	62.162

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000011490	-	99	73.822	ENSG00000099817	POLR2E	99	73.822	Homo_sapiens
ENSODEG00000011490	-	100	70.833	ENSAPOG00000002935	polr2eb	100	70.833	Acanthochromis_polyacanthus
ENSODEG00000011490	-	100	72.381	ENSAMEG00000003159	POLR2E	100	72.381	Ailuropoda_melanoleuca
ENSODEG00000011490	-	100	71.354	ENSACIG00000024371	polr2eb	100	71.354	Amphilophus_citrinellus
ENSODEG00000011490	-	100	70.833	ENSAOCG00000018166	polr2eb	100	70.833	Amphiprion_ocellaris
ENSODEG00000011490	-	100	69.048	ENSAPEG00000009000	polr2eb	100	69.048	Amphiprion_percula
ENSODEG00000011490	-	100	70.833	ENSATEG00000023760	polr2eb	100	70.833	Anabas_testudineus
ENSODEG00000011490	-	99	74.346	ENSANAG00000038488	POLR2E	100	72.381	Aotus_nancymaae
ENSODEG00000011490	-	100	71.354	ENSACLG00000005254	polr2eb	100	71.354	Astatotilapia_calliptera
ENSODEG00000011490	-	100	69.524	ENSAMXG00000018915	POLR2E	100	69.524	Astyanax_mexicanus
ENSODEG00000011490	-	100	72.381	ENSBTAG00000020776	POLR2E	100	72.381	Bos_taurus
ENSODEG00000011490	-	99	59.135	WBGene00019246	rpb-5	99	59.135	Caenorhabditis_elegans
ENSODEG00000011490	-	62	65.714	ENSCJAG00000007666	-	77	65.714	Callithrix_jacchus
ENSODEG00000011490	-	100	69.524	ENSCAFG00000019546	POLR2E	100	69.524	Canis_familiaris
ENSODEG00000011490	-	100	72.381	ENSCAFG00020017111	POLR2E	100	72.381	Canis_lupus_dingo
ENSODEG00000011490	-	100	72.381	ENSCHIG00000014151	POLR2E	100	72.381	Capra_hircus
ENSODEG00000011490	-	100	68.333	ENSTSYG00000026377	POLR2E	100	68.333	Carlito_syrichta
ENSODEG00000011490	-	89	71.875	ENSCAPG00000010843	POLR2E	93	71.875	Cavia_aperea
ENSODEG00000011490	-	100	72.381	ENSCPOG00000001542	POLR2E	100	72.381	Cavia_porcellus
ENSODEG00000011490	-	99	74.346	ENSCCAG00000025658	POLR2E	99	74.346	Cebus_capucinus
ENSODEG00000011490	-	99	74.346	ENSCATG00000008926	POLR2E	99	74.346	Cercocebus_atys
ENSODEG00000011490	-	97	52.683	ENSCLAG00000009238	-	100	52.683	Chinchilla_lanigera
ENSODEG00000011490	-	100	72.381	ENSCLAG00000014874	-	100	72.381	Chinchilla_lanigera
ENSODEG00000011490	-	100	72.381	ENSCSAG00000012336	POLR2E	100	72.381	Chlorocebus_sabaeus
ENSODEG00000011490	-	100	71.905	ENSCPBG00000009702	POLR2E	100	71.905	Chrysemys_picta_bellii
ENSODEG00000011490	-	100	62.857	ENSCING00000024933	-	99	62.857	Ciona_intestinalis
ENSODEG00000011490	-	99	74.346	ENSCANG00000025560	POLR2E	99	74.346	Colobus_angolensis_palliatus
ENSODEG00000011490	-	100	72.381	ENSCGRG00001022927	Polr2e	100	72.381	Cricetulus_griseus_chok1gshd
ENSODEG00000011490	-	100	69.767	ENSCGRG00000016441	Polr2e	100	69.767	Cricetulus_griseus_crigri
ENSODEG00000011490	-	100	69.792	ENSCSEG00000007107	polr2eb	100	69.792	Cynoglossus_semilaevis
ENSODEG00000011490	-	100	70.833	ENSCVAG00000019940	polr2eb	100	70.833	Cyprinodon_variegatus
ENSODEG00000011490	-	100	68.095	ENSDARG00000026183	polr2eb	100	68.095	Danio_rerio
ENSODEG00000011490	-	88	69.474	ENSDNOG00000044994	POLR2E	84	69.474	Dasypus_novemcinctus
ENSODEG00000011490	-	100	72.381	ENSDORG00000001154	Polr2e	100	72.381	Dipodomys_ordii
ENSODEG00000011490	-	99	62.201	FBgn0033571	Rpb5	99	62.201	Drosophila_melanogaster
ENSODEG00000011490	-	78	67.516	ENSEBUG00000010159	-	76	67.516	Eptatretus_burgeri
ENSODEG00000011490	-	65	64.828	ENSEASG00005021615	POLR2E	67	61.728	Equus_asinus_asinus
ENSODEG00000011490	-	100	74.479	ENSECAG00000011124	POLR2E	100	74.479	Equus_caballus
ENSODEG00000011490	-	100	70.833	ENSELUG00000005815	POLR2E	100	70.833	Esox_lucius
ENSODEG00000011490	-	100	70.833	ENSELUG00000020646	polr2e	100	70.833	Esox_lucius
ENSODEG00000011490	-	99	74.346	ENSFCAG00000007318	POLR2E	100	74.346	Felis_catus
ENSODEG00000011490	-	89	71.354	ENSFALG00000013986	POLR2E	99	71.354	Ficedula_albicollis
ENSODEG00000011490	-	100	72.381	ENSFDAG00000014539	POLR2E	100	72.381	Fukomys_damarensis
ENSODEG00000011490	-	100	70.833	ENSFHEG00000022398	polr2eb	100	70.833	Fundulus_heteroclitus
ENSODEG00000011490	-	100	68.571	ENSGMOG00000007615	polr2eb	100	68.571	Gadus_morhua
ENSODEG00000011490	-	100	71.905	ENSGALG00000002591	POLR2E	100	71.905	Gallus_gallus
ENSODEG00000011490	-	100	71.354	ENSGAFG00000005087	polr2eb	100	71.354	Gambusia_affinis
ENSODEG00000011490	-	100	68.571	ENSGACG00000013247	polr2eb	100	68.571	Gasterosteus_aculeatus
ENSODEG00000011490	-	100	71.905	ENSGAGG00000008356	POLR2E	100	71.905	Gopherus_agassizii
ENSODEG00000011490	-	99	74.346	ENSGGOG00000011267	POLR2E	99	74.346	Gorilla_gorilla
ENSODEG00000011490	-	63	64.228	ENSHBUG00000011099	polr2eb	99	64.228	Haplochromis_burtoni
ENSODEG00000011490	-	100	71.429	ENSHGLG00000013330	POLR2E	100	71.429	Heterocephalus_glaber_female
ENSODEG00000011490	-	100	71.429	ENSHGLG00100011014	POLR2E	100	71.429	Heterocephalus_glaber_male
ENSODEG00000011490	-	70	66.667	ENSHCOG00000012099	-	97	66.667	Hippocampus_comes
ENSODEG00000011490	-	100	70.312	ENSHCOG00000000906	polr2eb	100	70.312	Hippocampus_comes
ENSODEG00000011490	-	100	69.048	ENSIPUG00000019801	polr2e	100	69.048	Ictalurus_punctatus
ENSODEG00000011490	-	100	72.381	ENSSTOG00000002853	POLR2E	100	72.381	Ictidomys_tridecemlineatus
ENSODEG00000011490	-	100	72.381	ENSJJAG00000016595	-	100	72.381	Jaculus_jaculus
ENSODEG00000011490	-	100	67.708	ENSJJAG00000003145	-	100	67.708	Jaculus_jaculus
ENSODEG00000011490	-	78	64.103	ENSJJAG00000015812	-	98	64.103	Jaculus_jaculus
ENSODEG00000011490	-	100	69.048	ENSKMAG00000005954	polr2eb	100	69.048	Kryptolebias_marmoratus
ENSODEG00000011490	-	100	70.833	ENSLBEG00000024802	polr2eb	100	70.833	Labrus_bergylta
ENSODEG00000011490	-	100	70.000	ENSLACG00000013686	POLR2E	100	70.000	Latimeria_chalumnae
ENSODEG00000011490	-	80	71.250	ENSLOCG00000004599	POLR2E	99	71.250	Lepisosteus_oculatus
ENSODEG00000011490	-	100	56.604	ENSLAFG00000025587	POLR2E	100	56.604	Loxodonta_africana
ENSODEG00000011490	-	99	74.346	ENSMFAG00000002884	POLR2E	99	74.346	Macaca_fascicularis
ENSODEG00000011490	-	99	74.346	ENSMMUG00000013927	POLR2E	99	74.346	Macaca_mulatta
ENSODEG00000011490	-	100	60.526	ENSMNEG00000033452	-	100	60.526	Macaca_nemestrina
ENSODEG00000011490	-	99	74.346	ENSMNEG00000034046	-	99	74.346	Macaca_nemestrina
ENSODEG00000011490	-	90	56.897	ENSMLEG00000012405	POLR2E	94	56.250	Mandrillus_leucophaeus
ENSODEG00000011490	-	100	70.833	ENSMAMG00000018703	polr2eb	100	70.833	Mastacembelus_armatus
ENSODEG00000011490	-	100	71.354	ENSMZEG00005010796	polr2eb	100	71.354	Maylandia_zebra
ENSODEG00000011490	-	100	70.616	ENSMGAG00000003769	POLR2E	100	70.616	Meleagris_gallopavo
ENSODEG00000011490	-	100	46.798	ENSMAUG00000011003	-	100	46.798	Mesocricetus_auratus
ENSODEG00000011490	-	90	71.503	ENSMAUG00000010125	-	100	71.728	Mesocricetus_auratus
ENSODEG00000011490	-	100	74.479	ENSMICG00000013063	POLR2E	99	74.479	Microcebus_murinus
ENSODEG00000011490	-	100	72.381	ENSMOCG00000013414	Polr2e	100	72.381	Microtus_ochrogaster
ENSODEG00000011490	-	100	69.271	ENSMMOG00000001161	polr2eb	100	69.271	Mola_mola
ENSODEG00000011490	-	89	62.304	ENSMMOG00000001167	polr2eb	88	62.304	Mola_mola
ENSODEG00000011490	-	100	71.905	ENSMODG00000005494	POLR2E	100	71.905	Monodelphis_domestica
ENSODEG00000011490	-	100	69.524	ENSMALG00000021888	polr2eb	100	69.524	Monopterus_albus
ENSODEG00000011490	-	100	72.381	MGP_CAROLIEiJ_G0015561	Polr2e	100	72.381	Mus_caroli
ENSODEG00000011490	-	100	72.381	ENSMUSG00000004667	Polr2e	100	72.381	Mus_musculus
ENSODEG00000011490	-	100	72.381	MGP_PahariEiJ_G0030974	Polr2e	100	72.381	Mus_pahari
ENSODEG00000011490	-	100	72.381	MGP_SPRETEiJ_G0016379	Polr2e	100	72.381	Mus_spretus
ENSODEG00000011490	-	100	71.905	ENSMPUG00000008953	POLR2E	100	71.905	Mustela_putorius_furo
ENSODEG00000011490	-	70	80.000	ENSMLUG00000006376	-	77	80.000	Myotis_lucifugus
ENSODEG00000011490	-	100	72.381	ENSMLUG00000013193	POLR2E	100	72.381	Myotis_lucifugus
ENSODEG00000011490	-	82	51.124	ENSNGAG00000017344	-	96	51.124	Nannospalax_galili
ENSODEG00000011490	-	100	72.381	ENSNGAG00000001147	Polr2e	100	72.381	Nannospalax_galili
ENSODEG00000011490	-	100	71.354	ENSNBRG00000022772	polr2eb	100	71.354	Neolamprologus_brichardi
ENSODEG00000011490	-	100	57.732	ENSNLEG00000031364	-	100	57.732	Nomascus_leucogenys
ENSODEG00000011490	-	100	70.833	ENSNLEG00000001207	-	100	70.833	Nomascus_leucogenys
ENSODEG00000011490	-	100	62.679	ENSOPRG00000008331	POLR2E	100	62.679	Ochotona_princeps
ENSODEG00000011490	-	100	69.524	ENSONIG00000002519	polr2eb	100	69.524	Oreochromis_niloticus
ENSODEG00000011490	-	100	71.354	ENSORLG00000015346	polr2eb	100	71.354	Oryzias_latipes
ENSODEG00000011490	-	100	71.354	ENSORLG00020020700	polr2e	100	71.354	Oryzias_latipes_hni
ENSODEG00000011490	-	100	71.354	ENSORLG00015016842	polr2e	100	71.354	Oryzias_latipes_hsok
ENSODEG00000011490	-	100	69.048	ENSOMEG00000002709	polr2eb	100	69.048	Oryzias_melastigma
ENSODEG00000011490	-	100	72.381	ENSOGAG00000012311	POLR2E	100	72.381	Otolemur_garnettii
ENSODEG00000011490	-	100	72.381	ENSOARG00000010994	POLR2E	100	72.381	Ovis_aries
ENSODEG00000011490	-	88	73.837	ENSPPAG00000003145	POLR2E	99	73.837	Pan_paniscus
ENSODEG00000011490	-	99	74.346	ENSPPRG00000000777	POLR2E	100	74.346	Panthera_pardus
ENSODEG00000011490	-	89	69.697	ENSPTIG00000012237	POLR2E	98	69.697	Panthera_tigris_altaica
ENSODEG00000011490	-	99	74.346	ENSPTRG00000010183	POLR2E	99	74.346	Pan_troglodytes
ENSODEG00000011490	-	99	74.346	ENSPANG00000018011	POLR2E	99	74.346	Papio_anubis
ENSODEG00000011490	-	100	70.312	ENSPKIG00000024123	POLR2E	100	70.312	Paramormyrops_kingsleyae
ENSODEG00000011490	-	100	70.312	ENSPKIG00000009607	POLR2E	100	70.312	Paramormyrops_kingsleyae
ENSODEG00000011490	-	99	68.269	ENSPSIG00000002870	POLR2E	100	68.269	Pelodiscus_sinensis
ENSODEG00000011490	-	100	70.833	ENSPMGG00000014354	polr2eb	100	70.833	Periophthalmus_magnuspinnatus
ENSODEG00000011490	-	100	72.381	ENSPEMG00000023261	Polr2e	100	72.381	Peromyscus_maniculatus_bairdii
ENSODEG00000011490	-	88	68.783	ENSPCIG00000007312	POLR2E	75	68.783	Phascolarctos_cinereus
ENSODEG00000011490	-	100	69.524	ENSPFOG00000005734	polr2eb	100	69.524	Poecilia_formosa
ENSODEG00000011490	-	100	71.354	ENSPLAG00000014496	polr2eb	100	71.354	Poecilia_latipinna
ENSODEG00000011490	-	100	71.354	ENSPMEG00000008053	polr2eb	100	71.354	Poecilia_mexicana
ENSODEG00000011490	-	100	71.354	ENSPREG00000006489	polr2eb	100	71.354	Poecilia_reticulata
ENSODEG00000011490	-	100	66.351	ENSPPYG00000009305	POLR2E	100	66.351	Pongo_abelii
ENSODEG00000011490	-	99	74.346	ENSPCOG00000014491	POLR2E	100	72.381	Propithecus_coquereli
ENSODEG00000011490	-	77	100.000	ENSPVAG00000007718	-	65	100.000	Pteropus_vampyrus
ENSODEG00000011490	-	88	66.316	ENSPNYG00000019797	polr2eb	96	66.316	Pundamilia_nyererei
ENSODEG00000011490	-	100	71.354	ENSPNAG00000026263	POLR2E	100	71.354	Pygocentrus_nattereri
ENSODEG00000011490	-	100	72.381	ENSRNOG00000013545	Polr2e	100	72.381	Rattus_norvegicus
ENSODEG00000011490	-	100	59.799	ENSRBIG00000027259	-	100	59.799	Rhinopithecus_bieti
ENSODEG00000011490	-	99	74.346	ENSRBIG00000028726	-	99	74.346	Rhinopithecus_bieti
ENSODEG00000011490	-	99	74.346	ENSRROG00000043763	POLR2E	99	74.346	Rhinopithecus_roxellana
ENSODEG00000011490	-	98	31.019	YBR154C	RPB5	98	31.019	Saccharomyces_cerevisiae
ENSODEG00000011490	-	99	74.346	ENSSBOG00000027241	POLR2E	99	74.346	Saimiri_boliviensis_boliviensis
ENSODEG00000011490	-	100	71.905	ENSSHAG00000010690	POLR2E	100	71.905	Sarcophilus_harrisii
ENSODEG00000011490	-	100	70.833	ENSSFOG00015006073	polr2e	100	70.833	Scleropages_formosus
ENSODEG00000011490	-	100	70.787	ENSSMAG00000012782	polr2eb	100	70.787	Scophthalmus_maximus
ENSODEG00000011490	-	100	70.833	ENSSDUG00000003352	polr2eb	100	70.833	Seriola_dumerili
ENSODEG00000011490	-	100	70.833	ENSSLDG00000004965	polr2eb	100	70.833	Seriola_lalandi_dorsalis
ENSODEG00000011490	-	100	70.476	ENSSPUG00000006114	POLR2E	100	70.476	Sphenodon_punctatus
ENSODEG00000011490	-	100	70.833	ENSSPAG00000017556	polr2eb	100	70.833	Stegastes_partitus
ENSODEG00000011490	-	100	72.381	ENSSSCG00000021472	POLR2E	100	72.381	Sus_scrofa
ENSODEG00000011490	-	67	79.167	ENSTGUG00000000922	POLR2E	85	79.167	Taeniopygia_guttata
ENSODEG00000011490	-	100	70.833	ENSTRUG00000018238	polr2eb	100	70.833	Takifugu_rubripes
ENSODEG00000011490	-	100	69.048	ENSTNIG00000013187	polr2eb	100	69.048	Tetraodon_nigroviridis
ENSODEG00000011490	-	100	71.905	ENSTTRG00000001484	POLR2E	100	71.905	Tursiops_truncatus
ENSODEG00000011490	-	100	74.869	ENSUAMG00000009166	POLR2E	100	74.869	Ursus_americanus
ENSODEG00000011490	-	100	72.381	ENSVVUG00000022818	POLR2E	54	72.381	Vulpes_vulpes
ENSODEG00000011490	-	100	70.476	ENSXETG00000003291	polr2e	100	70.476	Xenopus_tropicalis
ENSODEG00000011490	-	100	71.354	ENSXCOG00000009197	polr2eb	100	71.354	Xiphophorus_couchianus
ENSODEG00000011490	-	100	71.354	ENSXMAG00000026495	polr2eb	100	71.354	Xiphophorus_maculatus