EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000011555 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: polyadenylate-binding protein 2 pseudogene
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 3465 bases
Position: chrJH651548.1:14878986-14882450
Accession: 101575673
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000015663	RRM_1	PF00076.22	2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000015864	-	678	XM_012514486	ENSODEP00000015663	187 (aa)	-	-

Gene Model

Click here to download ENSODEG00000011555's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000011555's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000011555	-	89	87.425	ENSODEG00000002083	BCL2L2-PABPN1	58	87.640
ENSODEG00000011555	-	94	46.961	ENSODEG00000004649	PABPN1L	60	46.961
ENSODEG00000011555	-	89	74.251	ENSODEG00000003739	-	59	75.281

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000011555	-	89	86.826	ENSG00000258643	BCL2L2-PABPN1	53	87.079	Homo_sapiens
ENSODEG00000011555	-	89	86.826	ENSG00000100836	PABPN1	100	87.079	Homo_sapiens
ENSODEG00000011555	-	89	70.833	ENSAPOG00000016425	pabpn1	76	72.067	Acanthochromis_polyacanthus
ENSODEG00000011555	-	89	86.826	ENSAMEG00000007048	BCL2L2-PABPN1	94	87.079	Ailuropoda_melanoleuca
ENSODEG00000011555	-	89	71.429	ENSACIG00000021744	pabpn1	100	72.626	Amphilophus_citrinellus
ENSODEG00000011555	-	89	70.833	ENSAOCG00000015805	pabpn1	76	72.067	Amphiprion_ocellaris
ENSODEG00000011555	-	89	70.833	ENSAPEG00000009623	pabpn1	76	72.067	Amphiprion_percula
ENSODEG00000011555	-	89	71.429	ENSATEG00000020531	pabpn1	76	72.626	Anabas_testudineus
ENSODEG00000011555	-	89	79.167	ENSACAG00000006185	-	63	79.888	Anolis_carolinensis
ENSODEG00000011555	-	89	86.826	ENSANAG00000024513	-	64	87.079	Aotus_nancymaae
ENSODEG00000011555	-	81	71.895	ENSACLG00000016374	pabpn1	56	73.171	Astatotilapia_calliptera
ENSODEG00000011555	-	89	72.619	ENSAMXG00000000452	pabpn1	100	73.743	Astyanax_mexicanus
ENSODEG00000011555	-	89	86.826	ENSBTAG00000006884	PABPN1	58	87.079	Bos_taurus
ENSODEG00000011555	-	78	82.759	ENSBTAG00000050594	-	61	84.416	Bos_taurus
ENSODEG00000011555	-	89	85.030	ENSBTAG00000053753	-	66	85.393	Bos_taurus
ENSODEG00000011555	-	70	56.061	WBGene00003904	pabp-2	84	49.162	Caenorhabditis_elegans
ENSODEG00000011555	-	93	83.237	ENSCJAG00000004407	-	92	83.696	Callithrix_jacchus
ENSODEG00000011555	-	89	86.826	ENSCJAG00000007960	-	66	87.079	Callithrix_jacchus
ENSODEG00000011555	-	89	86.826	ENSCAFG00000011482	PABPN1	58	87.079	Canis_familiaris
ENSODEG00000011555	-	89	86.826	ENSCAFG00020006651	-	58	87.079	Canis_lupus_dingo
ENSODEG00000011555	-	89	86.826	ENSCAFG00020007298	-	58	87.079	Canis_lupus_dingo
ENSODEG00000011555	-	89	86.826	ENSCHIG00000012184	PABPN1	58	87.079	Capra_hircus
ENSODEG00000011555	-	89	86.826	ENSTSYG00000033996	BCL2L2-PABPN1	100	87.079	Carlito_syrichta
ENSODEG00000011555	-	73	90.511	ENSCAPG00000009461	-	98	90.511	Cavia_aperea
ENSODEG00000011555	-	89	87.425	ENSCPOG00000025574	PABPN1	58	87.640	Cavia_porcellus
ENSODEG00000011555	-	89	86.826	ENSCCAG00000033954	BCL2L2-PABPN1	66	87.079	Cebus_capucinus
ENSODEG00000011555	-	89	86.826	ENSCATG00000038536	BCL2L2-PABPN1	66	87.079	Cercocebus_atys
ENSODEG00000011555	-	80	89.333	ENSCLAG00000012423	PABPN1	64	81.395	Chinchilla_lanigera
ENSODEG00000011555	-	89	85.629	ENSCSAG00000016036	PABPN1	58	85.955	Chlorocebus_sabaeus
ENSODEG00000011555	-	89	78.443	ENSCHOG00000004798	BCL2L2-PABPN1	77	79.213	Choloepus_hoffmanni
ENSODEG00000011555	-	89	79.641	ENSCPBG00000026060	-	100	80.337	Chrysemys_picta_bellii
ENSODEG00000011555	-	95	53.933	ENSCING00000012468	-	74	53.933	Ciona_intestinalis
ENSODEG00000011555	-	95	51.685	ENSCSAVG00000002001	-	100	52.809	Ciona_savignyi
ENSODEG00000011555	-	89	86.826	ENSCANG00000009750	BCL2L2-PABPN1	100	87.079	Colobus_angolensis_palliatus
ENSODEG00000011555	-	89	74.251	ENSCANG00000030980	-	63	73.596	Colobus_angolensis_palliatus
ENSODEG00000011555	-	89	86.228	ENSCGRG00001019696	Pabpn1	100	86.517	Cricetulus_griseus_chok1gshd
ENSODEG00000011555	-	89	86.228	ENSCGRG00000011102	Pabpn1	100	86.517	Cricetulus_griseus_crigri
ENSODEG00000011555	-	89	70.833	ENSCSEG00000008774	pabpn1	76	72.067	Cynoglossus_semilaevis
ENSODEG00000011555	-	89	69.643	ENSCVAG00000003152	pabpn1	76	70.950	Cyprinodon_variegatus
ENSODEG00000011555	-	89	72.024	ENSDARG00000045373	pabpn1	76	73.184	Danio_rerio
ENSODEG00000011555	-	65	59.504	ENSDARG00000087996	pabpn1l	73	59.504	Danio_rerio
ENSODEG00000011555	-	89	86.826	ENSDNOG00000023682	PABPN1	58	87.079	Dasypus_novemcinctus
ENSODEG00000011555	-	71	81.203	ENSDORG00000023928	-	92	81.203	Dipodomys_ordii
ENSODEG00000011555	-	89	86.826	ENSDORG00000028966	-	58	87.079	Dipodomys_ordii
ENSODEG00000011555	-	95	50.562	FBgn0005648	Pabp2	76	50.562	Drosophila_melanogaster
ENSODEG00000011555	-	95	68.715	ENSEBUG00000002322	pabpn1	77	68.715	Eptatretus_burgeri
ENSODEG00000011555	-	89	86.826	ENSEASG00005011716	PABPN1	58	87.079	Equus_asinus_asinus
ENSODEG00000011555	-	88	86.061	ENSECAG00000011652	PABPN1	56	87.879	Equus_caballus
ENSODEG00000011555	-	89	80.240	ENSEEUG00000012973	-	60	80.899	Erinaceus_europaeus
ENSODEG00000011555	-	89	74.405	ENSELUG00000022654	pabpn1	75	75.419	Esox_lucius
ENSODEG00000011555	-	89	86.826	ENSFCAG00000031922	PABPN1	58	87.079	Felis_catus
ENSODEG00000011555	-	89	87.425	ENSFDAG00000018381	BCL2L2-PABPN1	100	87.640	Fukomys_damarensis
ENSODEG00000011555	-	89	66.071	ENSFHEG00000007215	pabpn1	76	69.832	Fundulus_heteroclitus
ENSODEG00000011555	-	81	73.684	ENSGMOG00000003922	pabpn1	56	74.847	Gadus_morhua
ENSODEG00000011555	-	89	75.148	ENSGALG00000052930	-	52	77.778	Gallus_gallus
ENSODEG00000011555	-	89	71.006	ENSGAFG00000017099	pabpn1	76	72.222	Gambusia_affinis
ENSODEG00000011555	-	89	67.222	ENSGACG00000002167	pabpn1	77	68.586	Gasterosteus_aculeatus
ENSODEG00000011555	-	89	73.653	ENSGGOG00000025919	-	99	74.157	Gorilla_gorilla
ENSODEG00000011555	-	89	72.455	ENSGGOG00000039675	-	65	73.596	Gorilla_gorilla
ENSODEG00000011555	-	89	86.826	ENSGGOG00000022683	-	66	87.079	Gorilla_gorilla
ENSODEG00000011555	-	89	71.429	ENSHBUG00000019523	pabpn1	76	72.626	Haplochromis_burtoni
ENSODEG00000011555	-	89	69.880	ENSHGLG00000018588	-	59	71.186	Heterocephalus_glaber_female
ENSODEG00000011555	-	89	67.066	ENSHGLG00000009842	-	100	68.539	Heterocephalus_glaber_female
ENSODEG00000011555	-	89	87.425	ENSHGLG00000002927	-	86	87.500	Heterocephalus_glaber_female
ENSODEG00000011555	-	89	69.880	ENSHGLG00100015565	-	60	71.186	Heterocephalus_glaber_male
ENSODEG00000011555	-	89	76.608	ENSHGLG00100018935	-	100	77.473	Heterocephalus_glaber_male
ENSODEG00000011555	-	89	87.425	ENSHGLG00100006673	-	100	87.640	Heterocephalus_glaber_male
ENSODEG00000011555	-	89	67.066	ENSHCOG00000004655	pabpn1	76	71.508	Hippocampus_comes
ENSODEG00000011555	-	89	71.429	ENSIPUG00000008085	PABPN1	76	72.626	Ictalurus_punctatus
ENSODEG00000011555	-	89	69.643	ENSIPUG00000000180	-	78	70.950	Ictalurus_punctatus
ENSODEG00000011555	-	89	86.826	ENSSTOG00000029847	BCL2L2-PABPN1	100	87.079	Ictidomys_tridecemlineatus
ENSODEG00000011555	-	89	86.826	ENSJJAG00000023507	Gm20521	100	87.079	Jaculus_jaculus
ENSODEG00000011555	-	89	70.414	ENSKMAG00000018748	pabpn1	76	71.667	Kryptolebias_marmoratus
ENSODEG00000011555	-	89	71.429	ENSLBEG00000027266	pabpn1	76	72.626	Labrus_bergylta
ENSODEG00000011555	-	82	76.129	ENSLACG00000000646	pabpn1	72	78.313	Latimeria_chalumnae
ENSODEG00000011555	-	81	74.342	ENSLOCG00000000796	pabpn1	58	75.460	Lepisosteus_oculatus
ENSODEG00000011555	-	95	56.742	ENSLOCG00000004694	pabpn1l	82	56.742	Lepisosteus_oculatus
ENSODEG00000011555	-	80	88.000	ENSLAFG00000031227	-	99	88.000	Loxodonta_africana
ENSODEG00000011555	-	89	86.826	ENSMFAG00000032183	BCL2L2-PABPN1	100	87.079	Macaca_fascicularis
ENSODEG00000011555	-	75	82.270	ENSMFAG00000031355	-	99	82.270	Macaca_fascicularis
ENSODEG00000011555	-	80	80.537	ENSMMUG00000048382	-	59	74.719	Macaca_mulatta
ENSODEG00000011555	-	89	86.826	ENSMMUG00000014747	BCL2L2-PABPN1	100	88.356	Macaca_mulatta
ENSODEG00000011555	-	90	73.810	ENSMNEG00000035750	-	99	82.270	Macaca_nemestrina
ENSODEG00000011555	-	89	86.826	ENSMNEG00000045065	BCL2L2-PABPN1	66	87.079	Macaca_nemestrina
ENSODEG00000011555	-	89	86.826	ENSMLEG00000043862	BCL2L2-PABPN1	100	87.079	Mandrillus_leucophaeus
ENSODEG00000011555	-	90	70.833	ENSMLEG00000034623	-	99	80.142	Mandrillus_leucophaeus
ENSODEG00000011555	-	81	73.026	ENSMAMG00000007979	pabpn1	60	71.591	Mastacembelus_armatus
ENSODEG00000011555	-	81	73.026	ENSMZEG00005011904	pabpn1	56	74.233	Maylandia_zebra
ENSODEG00000011555	-	89	86.228	ENSMAUG00000007383	Gm20521	60	86.517	Mesocricetus_auratus
ENSODEG00000011555	-	89	86.826	ENSMICG00000010002	BCL2L2-PABPN1	66	87.079	Microcebus_murinus
ENSODEG00000011555	-	89	85.629	ENSMOCG00000018557	Gm20521	83	86.029	Microtus_ochrogaster
ENSODEG00000011555	-	89	72.024	ENSMMOG00000005405	pabpn1	76	73.184	Mola_mola
ENSODEG00000011555	-	88	84.146	ENSMODG00000004535	-	58	84.571	Monodelphis_domestica
ENSODEG00000011555	-	81	73.026	ENSMALG00000019612	pabpn1	59	71.591	Monopterus_albus
ENSODEG00000011555	-	89	84.431	MGP_CAROLIEiJ_G0019276	Gm20521	53	84.831	Mus_caroli
ENSODEG00000011555	-	89	84.431	MGP_CAROLIEiJ_G0019277	Pabpn1	100	84.831	Mus_caroli
ENSODEG00000011555	-	89	85.030	ENSMUSG00000092232	Gm20521	53	85.393	Mus_musculus
ENSODEG00000011555	-	89	85.030	ENSMUSG00000022194	Pabpn1	100	85.393	Mus_musculus
ENSODEG00000011555	-	89	85.030	MGP_PahariEiJ_G0030294	Gm20521	53	85.393	Mus_pahari
ENSODEG00000011555	-	89	85.030	MGP_PahariEiJ_G0030295	Pabpn1	100	90.476	Mus_pahari
ENSODEG00000011555	-	89	85.030	MGP_SPRETEiJ_G0020165	Gm20521	53	85.393	Mus_spretus
ENSODEG00000011555	-	89	85.030	MGP_SPRETEiJ_G0020166	Pabpn1	100	85.393	Mus_spretus
ENSODEG00000011555	-	82	87.662	ENSMPUG00000006775	-	98	87.879	Mustela_putorius_furo
ENSODEG00000011555	-	95	85.955	ENSMLUG00000003800	-	94	85.955	Myotis_lucifugus
ENSODEG00000011555	-	89	79.290	ENSMLUG00000012452	-	59	82.222	Myotis_lucifugus
ENSODEG00000011555	-	89	83.832	ENSMLUG00000028677	-	65	84.270	Myotis_lucifugus
ENSODEG00000011555	-	89	86.826	ENSNGAG00000019529	Gm20521	53	87.079	Nannospalax_galili
ENSODEG00000011555	-	89	71.429	ENSNBRG00000023955	pabpn1	100	72.626	Neolamprologus_brichardi
ENSODEG00000011555	-	79	64.865	ENSNLEG00000035292	-	99	64.865	Nomascus_leucogenys
ENSODEG00000011555	-	89	86.826	ENSNLEG00000015007	-	63	87.079	Nomascus_leucogenys
ENSODEG00000011555	-	86	69.565	ENSNLEG00000030598	-	64	69.663	Nomascus_leucogenys
ENSODEG00000011555	-	81	73.026	ENSONIG00000008112	pabpn1	56	74.233	Oreochromis_niloticus
ENSODEG00000011555	-	78	84.932	ENSOANG00000009218	-	100	84.932	Ornithorhynchus_anatinus
ENSODEG00000011555	-	89	86.826	ENSOCUG00000016174	PABPN1	65	87.079	Oryctolagus_cuniculus
ENSODEG00000011555	-	88	69.277	ENSORLG00000027900	pabpn1	74	70.621	Oryzias_latipes
ENSODEG00000011555	-	78	73.973	ENSORLG00020004681	pabpn1	59	72.159	Oryzias_latipes_hni
ENSODEG00000011555	-	89	72.024	ENSORLG00015000018	pabpn1	76	73.184	Oryzias_latipes_hsok
ENSODEG00000011555	-	81	73.026	ENSOMEG00000016618	pabpn1	59	74.233	Oryzias_melastigma
ENSODEG00000011555	-	89	86.826	ENSOGAG00000008710	PABPN1	58	87.079	Otolemur_garnettii
ENSODEG00000011555	-	89	74.850	ENSPPAG00000039421	-	100	75.843	Pan_paniscus
ENSODEG00000011555	-	89	86.826	ENSPPAG00000028984	BCL2L2-PABPN1	98	87.879	Pan_paniscus
ENSODEG00000011555	-	89	86.826	ENSPPRG00000010567	PABPN1	58	87.079	Panthera_pardus
ENSODEG00000011555	-	89	86.826	ENSPTIG00000001063	BCL2L2-PABPN1	100	87.079	Panthera_tigris_altaica
ENSODEG00000011555	-	89	72.455	ENSPTRG00000047273	-	65	73.596	Pan_troglodytes
ENSODEG00000011555	-	89	86.826	ENSPTRG00000006167	BCL2L2	66	87.079	Pan_troglodytes
ENSODEG00000011555	-	90	73.214	ENSPANG00000023326	-	99	81.560	Papio_anubis
ENSODEG00000011555	-	89	86.826	ENSPANG00000021100	BCL2L2-PABPN1	66	87.079	Papio_anubis
ENSODEG00000011555	-	89	70.833	ENSPKIG00000018052	pabpn1	76	72.067	Paramormyrops_kingsleyae
ENSODEG00000011555	-	89	72.024	ENSPKIG00000008144	-	59	72.159	Paramormyrops_kingsleyae
ENSODEG00000011555	-	95	55.618	ENSPKIG00000008340	pabpn1l	82	56.180	Paramormyrops_kingsleyae
ENSODEG00000011555	-	61	77.193	ENSPSIG00000011959	-	83	77.193	Pelodiscus_sinensis
ENSODEG00000011555	-	81	72.368	ENSPMGG00000022027	pabpn1	58	73.620	Periophthalmus_magnuspinnatus
ENSODEG00000011555	-	89	86.228	ENSPEMG00000008332	Gm20521	82	86.029	Peromyscus_maniculatus_bairdii
ENSODEG00000011555	-	70	74.615	ENSPMAG00000006212	pabpn1	77	64.324	Petromyzon_marinus
ENSODEG00000011555	-	89	85.030	ENSPCIG00000027751	-	58	85.393	Phascolarctos_cinereus
ENSODEG00000011555	-	89	68.047	ENSPFOG00000010351	pabpn1	75	71.111	Poecilia_formosa
ENSODEG00000011555	-	81	71.895	ENSPLAG00000022696	pabpn1	60	70.621	Poecilia_latipinna
ENSODEG00000011555	-	89	68.047	ENSPMEG00000020856	pabpn1	76	71.111	Poecilia_mexicana
ENSODEG00000011555	-	89	68.047	ENSPREG00000011278	pabpn1	76	71.111	Poecilia_reticulata
ENSODEG00000011555	-	82	87.662	ENSPPYG00000005663	PABPN1	59	87.879	Pongo_abelii
ENSODEG00000011555	-	82	70.513	ENSPCAG00000005902	PABPN1	57	71.856	Procavia_capensis
ENSODEG00000011555	-	89	86.826	ENSPCOG00000028047	BCL2L2-PABPN1	66	87.079	Propithecus_coquereli
ENSODEG00000011555	-	89	84.431	ENSPVAG00000005270	PABPN1	58	84.831	Pteropus_vampyrus
ENSODEG00000011555	-	89	71.429	ENSPNYG00000013182	pabpn1	76	72.626	Pundamilia_nyererei
ENSODEG00000011555	-	95	55.618	ENSPNAG00000021666	pabpn1l	84	57.542	Pygocentrus_nattereri
ENSODEG00000011555	-	89	72.619	ENSPNAG00000023526	pabpn1	76	73.743	Pygocentrus_nattereri
ENSODEG00000011555	-	89	85.629	ENSRNOG00000042195	Pabpn1	59	85.955	Rattus_norvegicus
ENSODEG00000011555	-	82	87.662	ENSRBIG00000040762	BCL2L2-PABPN1	51	87.879	Rhinopithecus_bieti
ENSODEG00000011555	-	89	74.850	ENSRBIG00000039547	-	64	74.157	Rhinopithecus_bieti
ENSODEG00000011555	-	83	76.129	ENSRBIG00000042811	-	73	73.333	Rhinopithecus_bieti
ENSODEG00000011555	-	89	75.449	ENSRROG00000040409	-	64	74.719	Rhinopithecus_roxellana
ENSODEG00000011555	-	89	86.826	ENSRROG00000045535	BCL2L2-PABPN1	100	87.079	Rhinopithecus_roxellana
ENSODEG00000011555	-	89	68.263	ENSRROG00000036409	-	53	69.663	Rhinopithecus_roxellana
ENSODEG00000011555	-	82	87.662	ENSSBOG00000026930	BCL2L2-PABPN1	98	87.879	Saimiri_boliviensis_boliviensis
ENSODEG00000011555	-	89	85.030	ENSSHAG00000014841	-	82	85.393	Sarcophilus_harrisii
ENSODEG00000011555	-	95	67.416	ENSSHAG00000007707	-	75	67.416	Sarcophilus_harrisii
ENSODEG00000011555	-	89	70.833	ENSSFOG00015012565	pabpn1	79	72.067	Scleropages_formosus
ENSODEG00000011555	-	89	70.238	ENSSFOG00015014718	pabpn1	76	71.508	Scleropages_formosus
ENSODEG00000011555	-	87	59.509	ENSSFOG00015015833	pabpn1l	73	60.123	Scleropages_formosus
ENSODEG00000011555	-	89	71.429	ENSSMAG00000020157	pabpn1	76	72.626	Scophthalmus_maximus
ENSODEG00000011555	-	81	73.026	ENSSDUG00000020582	pabpn1	59	71.591	Seriola_dumerili
ENSODEG00000011555	-	89	71.429	ENSSLDG00000007118	pabpn1	76	72.626	Seriola_lalandi_dorsalis
ENSODEG00000011555	-	89	79.042	ENSSPUG00000018308	-	100	79.775	Sphenodon_punctatus
ENSODEG00000011555	-	89	72.024	ENSSPAG00000021658	pabpn1	76	73.184	Stegastes_partitus
ENSODEG00000011555	-	95	70.056	ENSSSCG00000034805	-	66	69.492	Sus_scrofa
ENSODEG00000011555	-	89	86.826	ENSSSCG00000002023	PABPN1	58	87.079	Sus_scrofa
ENSODEG00000011555	-	94	50.568	ENSSSCG00000038472	-	97	50.568	Sus_scrofa
ENSODEG00000011555	-	89	72.024	ENSTRUG00000023664	pabpn1	76	73.184	Takifugu_rubripes
ENSODEG00000011555	-	81	74.342	ENSTNIG00000005369	pabpn1	74	75.460	Tetraodon_nigroviridis
ENSODEG00000011555	-	89	86.826	ENSUAMG00000024460	PABPN1	58	87.079	Ursus_americanus
ENSODEG00000011555	-	89	86.826	ENSUMAG00000014288	BCL2L2-PABPN1	53	87.079	Ursus_maritimus
ENSODEG00000011555	-	89	86.826	ENSVVUG00000019912	BCL2L2-PABPN1	70	87.079	Vulpes_vulpes
ENSODEG00000011555	-	89	76.048	ENSXETG00000014597	pabpn1	60	80.899	Xenopus_tropicalis
ENSODEG00000011555	-	80	69.737	ENSXCOG00000005158	pabpn1	89	71.711	Xiphophorus_couchianus
ENSODEG00000011555	-	89	68.639	ENSXMAG00000006196	pabpn1	76	71.667	Xiphophorus_maculatus