EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000011745 (Gene tree)
Gene ID: 101571206
Gene Symbol: R3HDM4
Alias: C19orf22|MGC16353
Full Name: R3H domain containing 4
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 7847 bases
Position: chrJH651565.1:5955404-5963250
Accession: 101571206
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000015942	R3H	PF01424.22	3.7e-06	1	1
ENSODEP00000015943	R3H	PF01424.22	3.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000016146	R3HDM4-202	807	-	ENSODEP00000015943	268 (aa)	-	-
ENSODET00000016145	R3HDM4-201	810	XM_004632657	ENSODEP00000015942	269 (aa)	XP_004632714	UPI0003340064

Gene Model

Click here to download ENSODEG00000011745's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000011745's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000011745	R3HDM4	100	90.335	ENSG00000198858	R3HDM4	100	90.335	Homo_sapiens
ENSODEG00000011745	R3HDM4	91	88.525	ENSAMEG00000003001	R3HDM4	100	88.525	Ailuropoda_melanoleuca
ENSODEG00000011745	R3HDM4	88	56.118	ENSACIG00000004672	r3hdm4	91	56.118	Amphilophus_citrinellus
ENSODEG00000011745	R3HDM4	87	52.991	ENSATEG00000015913	r3hdm4	91	54.274	Anabas_testudineus
ENSODEG00000011745	R3HDM4	91	91.358	ENSANAG00000029748	R3HDM4	100	91.358	Aotus_nancymaae
ENSODEG00000011745	R3HDM4	100	87.868	ENSBTAG00000046406	R3HDM4	100	88.235	Bos_taurus
ENSODEG00000011745	R3HDM4	97	86.486	ENSCJAG00000020114	R3HDM4	97	86.486	Callithrix_jacchus
ENSODEG00000011745	R3HDM4	100	87.500	ENSCAFG00000019665	R3HDM4	100	87.500	Canis_familiaris
ENSODEG00000011745	R3HDM4	100	87.132	ENSCAFG00020016880	R3HDM4	100	87.132	Canis_lupus_dingo
ENSODEG00000011745	R3HDM4	100	88.235	ENSCHIG00000020110	R3HDM4	100	88.235	Capra_hircus
ENSODEG00000011745	R3HDM4	94	88.048	ENSCCAG00000019955	R3HDM4	91	88.048	Cebus_capucinus
ENSODEG00000011745	R3HDM4	100	88.561	ENSCATG00000037269	R3HDM4	100	88.930	Cercocebus_atys
ENSODEG00000011745	R3HDM4	91	97.541	ENSCLAG00000007094	R3HDM4	100	97.541	Chinchilla_lanigera
ENSODEG00000011745	R3HDM4	100	89.591	ENSCSAG00000012574	R3HDM4	100	89.591	Chlorocebus_sabaeus
ENSODEG00000011745	R3HDM4	97	67.181	ENSCPBG00000009805	R3HDM4	98	67.181	Chrysemys_picta_bellii
ENSODEG00000011745	R3HDM4	99	87.218	ENSCANG00000040439	R3HDM4	93	87.218	Colobus_angolensis_palliatus
ENSODEG00000011745	R3HDM4	99	85.502	ENSCGRG00001021650	R3hdm4	100	85.874	Cricetulus_griseus_chok1gshd
ENSODEG00000011745	R3HDM4	99	85.502	ENSCGRG00000013169	R3hdm4	100	85.874	Cricetulus_griseus_crigri
ENSODEG00000011745	R3HDM4	88	53.361	ENSCSEG00000018211	r3hdm4	91	53.361	Cynoglossus_semilaevis
ENSODEG00000011745	R3HDM4	88	56.303	ENSCVAG00000017127	r3hdm4	92	56.303	Cyprinodon_variegatus
ENSODEG00000011745	R3HDM4	96	87.405	ENSDORG00000006605	R3hdm4	100	91.429	Dipodomys_ordii
ENSODEG00000011745	R3HDM4	91	90.984	ENSEASG00005021556	R3HDM4	89	90.984	Equus_asinus_asinus
ENSODEG00000011745	R3HDM4	100	87.454	ENSECAG00000000003	R3HDM4	100	89.299	Equus_caballus
ENSODEG00000011745	R3HDM4	100	88.889	ENSFCAG00000042437	R3HDM4	100	88.889	Felis_catus
ENSODEG00000011745	R3HDM4	91	69.136	ENSFALG00000013938	R3HDM4	100	69.136	Ficedula_albicollis
ENSODEG00000011745	R3HDM4	91	95.102	ENSFDAG00000017040	R3HDM4	100	95.102	Fukomys_damarensis
ENSODEG00000011745	R3HDM4	88	55.696	ENSFHEG00000017636	r3hdm4	92	55.696	Fundulus_heteroclitus
ENSODEG00000011745	R3HDM4	88	51.899	ENSGMOG00000001231	r3hdm4	97	52.521	Gadus_morhua
ENSODEG00000011745	R3HDM4	97	63.878	ENSGALG00000001998	R3HDM4	98	64.615	Gallus_gallus
ENSODEG00000011745	R3HDM4	88	56.962	ENSGAFG00000004173	r3hdm4	92	56.962	Gambusia_affinis
ENSODEG00000011745	R3HDM4	96	66.926	ENSGAGG00000019698	R3HDM4	97	66.926	Gopherus_agassizii
ENSODEG00000011745	R3HDM4	96	89.189	ENSGGOG00000008040	R3HDM4	100	92.213	Gorilla_gorilla
ENSODEG00000011745	R3HDM4	88	55.042	ENSHBUG00000014810	r3hdm4	91	56.303	Haplochromis_burtoni
ENSODEG00000011745	R3HDM4	100	94.424	ENSHGLG00000016194	R3HDM4	100	94.424	Heterocephalus_glaber_female
ENSODEG00000011745	R3HDM4	88	55.319	ENSHCOG00000008422	r3hdm4	91	55.319	Hippocampus_comes
ENSODEG00000011745	R3HDM4	88	53.782	ENSIPUG00000006716	r3hdm4	91	53.782	Ictalurus_punctatus
ENSODEG00000011745	R3HDM4	91	90.574	ENSSTOG00000023015	R3HDM4	100	90.574	Ictidomys_tridecemlineatus
ENSODEG00000011745	R3HDM4	99	86.989	ENSJJAG00000012475	R3hdm4	100	86.989	Jaculus_jaculus
ENSODEG00000011745	R3HDM4	88	55.462	ENSKMAG00000005853	r3hdm4	91	55.462	Kryptolebias_marmoratus
ENSODEG00000011745	R3HDM4	88	54.852	ENSLBEG00000000730	r3hdm4	91	54.852	Labrus_bergylta
ENSODEG00000011745	R3HDM4	94	59.921	ENSLACG00000016445	R3HDM4	97	59.921	Latimeria_chalumnae
ENSODEG00000011745	R3HDM4	91	55.510	ENSLOCG00000002423	r3hdm4	100	52.045	Lepisosteus_oculatus
ENSODEG00000011745	R3HDM4	90	89.256	ENSLAFG00000017796	R3HDM4	93	89.256	Loxodonta_africana
ENSODEG00000011745	R3HDM4	100	89.591	ENSMFAG00000044131	R3HDM4	100	89.591	Macaca_fascicularis
ENSODEG00000011745	R3HDM4	100	82.900	ENSMMUG00000009682	R3HDM4	100	82.900	Macaca_mulatta
ENSODEG00000011745	R3HDM4	91	91.803	ENSMNEG00000044115	R3HDM4	99	91.803	Macaca_nemestrina
ENSODEG00000011745	R3HDM4	93	88.095	ENSMLEG00000035693	R3HDM4	91	90.244	Mandrillus_leucophaeus
ENSODEG00000011745	R3HDM4	76	57.561	ENSMAMG00000005652	r3hdm4	82	57.561	Mastacembelus_armatus
ENSODEG00000011745	R3HDM4	99	84.758	ENSMAUG00000010611	R3hdm4	100	85.130	Mesocricetus_auratus
ENSODEG00000011745	R3HDM4	100	89.259	ENSMICG00000010124	R3HDM4	100	89.259	Microcebus_murinus
ENSODEG00000011745	R3HDM4	99	83.582	ENSMOCG00000002646	R3hdm4	100	83.955	Microtus_ochrogaster
ENSODEG00000011745	R3HDM4	88	55.274	ENSMMOG00000008253	r3hdm4	92	55.274	Mola_mola
ENSODEG00000011745	R3HDM4	87	67.241	ENSMODG00000005698	R3HDM4	100	67.241	Monodelphis_domestica
ENSODEG00000011745	R3HDM4	88	54.430	ENSMALG00000018856	r3hdm4	91	54.430	Monopterus_albus
ENSODEG00000011745	R3HDM4	99	83.582	MGP_CAROLIEiJ_G0015551	R3hdm4	100	84.701	Mus_caroli
ENSODEG00000011745	R3HDM4	99	83.582	ENSMUSG00000035781	R3hdm4	100	84.701	Mus_musculus
ENSODEG00000011745	R3HDM4	99	83.582	MGP_PahariEiJ_G0030964	R3hdm4	100	84.701	Mus_pahari
ENSODEG00000011745	R3HDM4	99	83.582	MGP_SPRETEiJ_G0016369	-	84	84.701	Mus_spretus
ENSODEG00000011745	R3HDM4	99	82.772	ENSMPUG00000009394	R3HDM4	99	82.772	Mustela_putorius_furo
ENSODEG00000011745	R3HDM4	88	55.462	ENSNBRG00000004438	r3hdm4	91	56.723	Neolamprologus_brichardi
ENSODEG00000011745	R3HDM4	84	90.476	ENSNLEG00000001022	R3HDM4	100	90.476	Nomascus_leucogenys
ENSODEG00000011745	R3HDM4	88	65.823	ENSMEUG00000011020	R3HDM4	99	65.823	Notamacropus_eugenii
ENSODEG00000011745	R3HDM4	88	55.042	ENSONIG00000012675	r3hdm4	84	56.303	Oreochromis_niloticus
ENSODEG00000011745	R3HDM4	88	55.462	ENSOMEG00000003005	r3hdm4	91	55.462	Oryzias_melastigma
ENSODEG00000011745	R3HDM4	94	88.048	ENSOGAG00000025656	R3HDM4	95	88.048	Otolemur_garnettii
ENSODEG00000011745	R3HDM4	91	91.393	ENSOARG00000009945	R3HDM4	100	91.393	Ovis_aries
ENSODEG00000011745	R3HDM4	96	89.575	ENSPPAG00000042371	R3HDM4	100	92.623	Pan_paniscus
ENSODEG00000011745	R3HDM4	100	89.591	ENSPANG00000015203	R3HDM4	100	89.591	Papio_anubis
ENSODEG00000011745	R3HDM4	86	56.957	ENSPKIG00000007421	r3hdm4	88	56.410	Paramormyrops_kingsleyae
ENSODEG00000011745	R3HDM4	88	51.883	ENSPMGG00000020467	r3hdm4	91	51.883	Periophthalmus_magnuspinnatus
ENSODEG00000011745	R3HDM4	90	89.583	ENSPEMG00000008365	Tmem259	100	89.300	Peromyscus_maniculatus_bairdii
ENSODEG00000011745	R3HDM4	88	56.118	ENSPFOG00000003199	r3hdm4	92	56.118	Poecilia_formosa
ENSODEG00000011745	R3HDM4	88	55.696	ENSPMEG00000014183	r3hdm4	92	55.696	Poecilia_mexicana
ENSODEG00000011745	R3HDM4	88	56.540	ENSPREG00000010709	r3hdm4	92	56.540	Poecilia_reticulata
ENSODEG00000011745	R3HDM4	100	87.732	ENSPPYG00000009297	R3HDM4	100	87.732	Pongo_abelii
ENSODEG00000011745	R3HDM4	56	88.158	ENSPCAG00000010997	R3HDM4	56	88.158	Procavia_capensis
ENSODEG00000011745	R3HDM4	100	88.889	ENSPCOG00000016785	R3HDM4	100	88.889	Propithecus_coquereli
ENSODEG00000011745	R3HDM4	88	55.042	ENSPNYG00000017489	r3hdm4	91	56.303	Pundamilia_nyererei
ENSODEG00000011745	R3HDM4	99	83.209	ENSRNOG00000011489	R3hdm4	100	83.582	Rattus_norvegicus
ENSODEG00000011745	R3HDM4	91	92.623	ENSRROG00000028842	R3HDM4	91	92.623	Rhinopithecus_roxellana
ENSODEG00000011745	R3HDM4	93	87.352	ENSSBOG00000019298	R3HDM4	73	88.142	Saimiri_boliviensis_boliviensis
ENSODEG00000011745	R3HDM4	54	71.233	ENSSHAG00000003036	-	100	71.233	Sarcophilus_harrisii
ENSODEG00000011745	R3HDM4	88	54.622	ENSSFOG00015020574	r3hdm4	100	49.635	Scleropages_formosus
ENSODEG00000011745	R3HDM4	88	55.462	ENSSMAG00000021090	r3hdm4	68	55.462	Scophthalmus_maximus
ENSODEG00000011745	R3HDM4	88	56.723	ENSSDUG00000008488	r3hdm4	91	56.723	Seriola_dumerili
ENSODEG00000011745	R3HDM4	88	56.723	ENSSLDG00000025328	r3hdm4	91	56.723	Seriola_lalandi_dorsalis
ENSODEG00000011745	R3HDM4	91	68.033	ENSSPUG00000005434	R3HDM4	95	68.313	Sphenodon_punctatus
ENSODEG00000011745	R3HDM4	88	53.390	ENSSPAG00000002562	r3hdm4	90	53.390	Stegastes_partitus
ENSODEG00000011745	R3HDM4	100	88.235	ENSSSCG00000013419	R3HDM4	100	88.235	Sus_scrofa
ENSODEG00000011745	R3HDM4	77	66.986	ENSTGUG00000000663	R3HDM4	100	66.986	Taeniopygia_guttata
ENSODEG00000011745	R3HDM4	91	87.295	ENSTTRG00000001470	R3HDM4	100	87.295	Tursiops_truncatus
ENSODEG00000011745	R3HDM4	100	76.838	ENSUAMG00000005751	R3HDM4	100	89.686	Ursus_americanus
ENSODEG00000011745	R3HDM4	100	87.868	ENSVVUG00000022685	R3HDM4	100	87.868	Vulpes_vulpes
ENSODEG00000011745	R3HDM4	88	46.186	ENSXETG00000033624	R3HDM4	91	46.186	Xenopus_tropicalis
ENSODEG00000011745	R3HDM4	88	56.303	ENSXCOG00000005127	r3hdm4	92	56.303	Xiphophorus_couchianus
ENSODEG00000011745	R3HDM4	88	56.540	ENSXMAG00000022875	r3hdm4	92	56.540	Xiphophorus_maculatus