EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000011822 (Gene tree)
Gene ID: 101575570
Gene Symbol: SBNO2
Alias: -
Full Name: strawberry notch homolog 2
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 31795 bases
Position: chrJH651565.1:6145967-6177761
Accession: 101575570
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000016063	ResIII	PF04851.15	3.1e-06	1	1
ENSODEP00000016062	ResIII	PF04851.15	3.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000016268	SBNO2-202	3897	-	ENSODEP00000016063	1298 (aa)	-	-
ENSODET00000016267	SBNO2-201	3963	XM_004632668	ENSODEP00000016062	1320 (aa)	XP_004632725	-

Gene Model

Click here to download ENSODEG00000011822's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000011822's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000011822	SBNO2	71	68.990	ENSODEG00000009997	SBNO1	83	57.331

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000011822	SBNO2	99	82.934	ENSG00000064932	SBNO2	97	83.752	Homo_sapiens
ENSODEG00000011822	SBNO2	86	67.670	ENSAPOG00000003185	si:ch73-63e15.2	87	67.311	Acanthochromis_polyacanthus
ENSODEG00000011822	SBNO2	86	67.842	ENSAOCG00000016581	si:ch73-63e15.2	93	68.672	Amphiprion_ocellaris
ENSODEG00000011822	SBNO2	86	67.756	ENSAPEG00000008862	si:ch73-63e15.2	75	68.170	Amphiprion_percula
ENSODEG00000011822	SBNO2	89	65.132	ENSATEG00000023838	si:ch73-63e15.2	93	69.247	Anabas_testudineus
ENSODEG00000011822	SBNO2	94	69.569	ENSAPLG00000007158	SBNO2	99	68.731	Anas_platyrhynchos
ENSODEG00000011822	SBNO2	99	80.405	ENSANAG00000026685	SBNO2	97	81.554	Aotus_nancymaae
ENSODEG00000011822	SBNO2	86	66.954	ENSACLG00000005090	si:ch73-63e15.2	72	67.070	Astatotilapia_calliptera
ENSODEG00000011822	SBNO2	88	64.716	ENSAMXG00000018868	sbno2a	97	68.725	Astyanax_mexicanus
ENSODEG00000011822	SBNO2	91	64.435	ENSAMXG00000015881	si:ch73-63e15.2	82	67.770	Astyanax_mexicanus
ENSODEG00000011822	SBNO2	99	82.985	ENSBTAG00000020780	SBNO2	98	84.169	Bos_taurus
ENSODEG00000011822	SBNO2	99	82.772	ENSCAFG00000019543	SBNO2	97	82.823	Canis_familiaris
ENSODEG00000011822	SBNO2	92	84.996	ENSCAFG00020017115	SBNO2	96	84.622	Canis_lupus_dingo
ENSODEG00000011822	SBNO2	99	82.800	ENSCHIG00000026127	SBNO2	97	82.664	Capra_hircus
ENSODEG00000011822	SBNO2	89	90.825	ENSCAPG00000005731	SBNO2	98	90.825	Cavia_aperea
ENSODEG00000011822	SBNO2	99	88.939	ENSCPOG00000007477	SBNO2	98	89.015	Cavia_porcellus
ENSODEG00000011822	SBNO2	99	80.466	ENSCCAG00000037518	SBNO2	97	81.940	Cebus_capucinus
ENSODEG00000011822	SBNO2	99	82.635	ENSCATG00000037046	SBNO2	97	83.595	Cercocebus_atys
ENSODEG00000011822	SBNO2	90	93.922	ENSCLAG00000010178	SBNO2	99	95.267	Chinchilla_lanigera
ENSODEG00000011822	SBNO2	99	82.586	ENSCSAG00000012317	SBNO2	98	82.498	Chlorocebus_sabaeus
ENSODEG00000011822	SBNO2	94	68.882	ENSCPBG00000008920	SBNO2	97	68.578	Chrysemys_picta_bellii
ENSODEG00000011822	SBNO2	86	84.010	ENSCANG00000036745	SBNO2	95	85.141	Colobus_angolensis_palliatus
ENSODEG00000011822	SBNO2	99	81.387	ENSCGRG00001023960	Sbno2	98	81.523	Cricetulus_griseus_chok1gshd
ENSODEG00000011822	SBNO2	99	83.133	ENSCGRG00000011984	Sbno2	98	83.271	Cricetulus_griseus_crigri
ENSODEG00000011822	SBNO2	85	64.594	ENSCSEG00000006856	si:ch73-63e15.2	90	68.882	Cynoglossus_semilaevis
ENSODEG00000011822	SBNO2	89	65.441	ENSCVAG00000005663	si:ch73-63e15.2	76	67.530	Cyprinodon_variegatus
ENSODEG00000011822	SBNO2	93	61.721	ENSDARG00000098801	sbno2a	88	63.051	Danio_rerio
ENSODEG00000011822	SBNO2	90	64.653	ENSDARG00000016188	SBNO2	80	66.929	Danio_rerio
ENSODEG00000011822	SBNO2	99	85.896	ENSDORG00000002916	Sbno2	98	85.511	Dipodomys_ordii
ENSODEG00000011822	SBNO2	99	83.271	ENSEASG00005021621	SBNO2	97	84.827	Equus_asinus_asinus
ENSODEG00000011822	SBNO2	99	83.346	ENSECAG00000011827	SBNO2	97	85.095	Equus_caballus
ENSODEG00000011822	SBNO2	89	66.337	ENSELUG00000020457	si:ch73-63e15.2	78	68.426	Esox_lucius
ENSODEG00000011822	SBNO2	92	70.449	ENSFALG00000013988	SBNO2	92	70.324	Ficedula_albicollis
ENSODEG00000011822	SBNO2	97	87.004	ENSFDAG00000015186	SBNO2	98	86.575	Fukomys_damarensis
ENSODEG00000011822	SBNO2	89	65.378	ENSFHEG00000022262	si:ch73-63e15.2	75	67.652	Fundulus_heteroclitus
ENSODEG00000011822	SBNO2	89	65.892	ENSGMOG00000007542	si:ch73-63e15.2	94	68.066	Gadus_morhua
ENSODEG00000011822	SBNO2	99	66.191	ENSGALG00000037522	SBNO2	90	70.129	Gallus_gallus
ENSODEG00000011822	SBNO2	89	65.705	ENSGAFG00000004860	si:ch73-63e15.2	89	67.823	Gambusia_affinis
ENSODEG00000011822	SBNO2	86	67.672	ENSGACG00000013190	si:ch73-63e15.2	94	68.412	Gasterosteus_aculeatus
ENSODEG00000011822	SBNO2	99	66.879	ENSGAGG00000008348	SBNO2	90	72.076	Gopherus_agassizii
ENSODEG00000011822	SBNO2	86	67.183	ENSHBUG00000010742	si:ch73-63e15.2	76	67.301	Haplochromis_burtoni
ENSODEG00000011822	SBNO2	99	92.911	ENSHGLG00000008739	SBNO2	98	92.256	Heterocephalus_glaber_female
ENSODEG00000011822	SBNO2	90	93.896	ENSHGLG00100005269	SBNO2	99	93.514	Heterocephalus_glaber_male
ENSODEG00000011822	SBNO2	85	66.870	ENSHCOG00000000884	si:ch73-63e15.2	84	67.395	Hippocampus_comes
ENSODEG00000011822	SBNO2	90	65.980	ENSIPUG00000000537	si:ch73-63e15.2	84	67.410	Ictalurus_punctatus
ENSODEG00000011822	SBNO2	90	63.136	ENSIPUG00000019672	sbno2	97	66.799	Ictalurus_punctatus
ENSODEG00000011822	SBNO2	99	86.562	ENSSTOG00000025832	SBNO2	98	86.787	Ictidomys_tridecemlineatus
ENSODEG00000011822	SBNO2	99	81.654	ENSJJAG00000017397	Sbno2	98	81.415	Jaculus_jaculus
ENSODEG00000011822	SBNO2	89	66.389	ENSKMAG00000005541	si:ch73-63e15.2	77	67.775	Kryptolebias_marmoratus
ENSODEG00000011822	SBNO2	85	67.210	ENSLBEG00000025016	si:ch73-63e15.2	95	69.239	Labrus_bergylta
ENSODEG00000011822	SBNO2	50	66.423	ENSLACG00000012598	SBNO2	96	73.171	Latimeria_chalumnae
ENSODEG00000011822	SBNO2	94	65.122	ENSLOCG00000004643	si:ch73-63e15.2	83	69.459	Lepisosteus_oculatus
ENSODEG00000011822	SBNO2	99	75.865	ENSLAFG00000008824	SBNO2	100	78.470	Loxodonta_africana
ENSODEG00000011822	SBNO2	99	80.570	ENSMFAG00000040030	SBNO2	97	81.754	Macaca_fascicularis
ENSODEG00000011822	SBNO2	99	82.810	ENSMMUG00000010886	SBNO2	98	82.164	Macaca_mulatta
ENSODEG00000011822	SBNO2	99	82.984	ENSMNEG00000039927	SBNO2	97	83.714	Macaca_nemestrina
ENSODEG00000011822	SBNO2	83	84.588	ENSMLEG00000038556	SBNO2	95	84.107	Mandrillus_leucophaeus
ENSODEG00000011822	SBNO2	85	68.111	ENSMAMG00000018758	si:ch73-63e15.2	74	68.320	Mastacembelus_armatus
ENSODEG00000011822	SBNO2	86	67.097	ENSMZEG00005010682	si:ch73-63e15.2	72	67.215	Maylandia_zebra
ENSODEG00000011822	SBNO2	95	70.511	ENSMGAG00000003801	SBNO2	98	70.287	Meleagris_gallopavo
ENSODEG00000011822	SBNO2	99	83.044	ENSMAUG00000008034	Sbno2	98	83.258	Mesocricetus_auratus
ENSODEG00000011822	SBNO2	99	84.783	ENSMICG00000013071	SBNO2	97	85.613	Microcebus_murinus
ENSODEG00000011822	SBNO2	99	82.907	ENSMOCG00000010504	Sbno2	98	83.120	Microtus_ochrogaster
ENSODEG00000011822	SBNO2	99	70.984	ENSMODG00000005382	SBNO2	89	73.847	Monodelphis_domestica
ENSODEG00000011822	SBNO2	71	63.071	ENSMALG00000021831	si:ch73-63e15.2	97	62.591	Monopterus_albus
ENSODEG00000011822	SBNO2	99	84.123	ENSMUSG00000035673	Sbno2	97	85.822	Mus_musculus
ENSODEG00000011822	SBNO2	99	83.735	MGP_PahariEiJ_G0030976	Sbno2	98	83.258	Mus_pahari
ENSODEG00000011822	SBNO2	99	84.036	MGP_SPRETEiJ_G0016381	Sbno2	97	84.710	Mus_spretus
ENSODEG00000011822	SBNO2	79	84.805	ENSMPUG00000008747	SBNO2	97	84.295	Mustela_putorius_furo
ENSODEG00000011822	SBNO2	99	81.462	ENSNGAG00000004308	Sbno2	98	81.114	Nannospalax_galili
ENSODEG00000011822	SBNO2	82	66.517	ENSNBRG00000022968	si:ch73-63e15.2	93	71.429	Neolamprologus_brichardi
ENSODEG00000011822	SBNO2	93	82.246	ENSNLEG00000001305	SBNO2	97	82.033	Nomascus_leucogenys
ENSODEG00000011822	SBNO2	70	72.987	ENSMEUG00000013511	-	78	72.987	Notamacropus_eugenii
ENSODEG00000011822	SBNO2	92	82.626	ENSOPRG00000017238	SBNO2	99	82.033	Ochotona_princeps
ENSODEG00000011822	SBNO2	86	67.356	ENSONIG00000002490	si:ch73-63e15.2	91	67.212	Oreochromis_niloticus
ENSODEG00000011822	SBNO2	85	67.509	ENSORLG00000000913	si:ch73-63e15.2	77	67.672	Oryzias_latipes
ENSODEG00000011822	SBNO2	85	67.474	ENSORLG00020010978	si:ch73-63e15.2	77	67.672	Oryzias_latipes_hni
ENSODEG00000011822	SBNO2	85	67.509	ENSORLG00015000202	si:ch73-63e15.2	77	67.586	Oryzias_latipes_hsok
ENSODEG00000011822	SBNO2	86	67.041	ENSOMEG00000000359	si:ch73-63e15.2	73	67.296	Oryzias_melastigma
ENSODEG00000011822	SBNO2	99	77.728	ENSOARG00000011130	SBNO2	96	82.128	Ovis_aries
ENSODEG00000011822	SBNO2	99	80.686	ENSPPAG00000032482	SBNO2	97	81.783	Pan_paniscus
ENSODEG00000011822	SBNO2	97	83.538	ENSPTRG00000010185	SBNO2	99	82.811	Pan_troglodytes
ENSODEG00000011822	SBNO2	99	79.416	ENSPANG00000009658	SBNO2	97	80.220	Papio_anubis
ENSODEG00000011822	SBNO2	76	69.625	ENSPKIG00000009707	-	83	69.625	Paramormyrops_kingsleyae
ENSODEG00000011822	SBNO2	85	67.313	ENSPKIG00000024201	si:ch73-63e15.2	81	68.162	Paramormyrops_kingsleyae
ENSODEG00000011822	SBNO2	72	77.528	ENSPSIG00000002852	SBNO2	99	77.835	Pelodiscus_sinensis
ENSODEG00000011822	SBNO2	85	67.279	ENSPMGG00000014375	si:ch73-63e15.2	86	67.340	Periophthalmus_magnuspinnatus
ENSODEG00000011822	SBNO2	99	81.071	ENSPEMG00000024122	Sbno2	98	80.679	Peromyscus_maniculatus_bairdii
ENSODEG00000011822	SBNO2	99	71.221	ENSPCIG00000011264	SBNO2	90	74.165	Phascolarctos_cinereus
ENSODEG00000011822	SBNO2	89	65.787	ENSPFOG00000004096	si:ch73-63e15.2	99	67.593	Poecilia_formosa
ENSODEG00000011822	SBNO2	86	67.931	ENSPLAG00000014653	si:ch73-63e15.2	75	67.997	Poecilia_latipinna
ENSODEG00000011822	SBNO2	89	65.705	ENSPMEG00000002129	si:ch73-63e15.2	90	68.835	Poecilia_mexicana
ENSODEG00000011822	SBNO2	89	65.818	ENSPREG00000006755	si:ch73-63e15.2	75	66.035	Poecilia_reticulata
ENSODEG00000011822	SBNO2	99	76.036	ENSPCAG00000012256	SBNO2	99	75.852	Procavia_capensis
ENSODEG00000011822	SBNO2	99	78.715	ENSPCOG00000015216	SBNO2	97	80.363	Propithecus_coquereli
ENSODEG00000011822	SBNO2	86	67.097	ENSPNYG00000019926	si:ch73-63e15.2	76	67.215	Pundamilia_nyererei
ENSODEG00000011822	SBNO2	89	64.784	ENSPNAG00000026609	sbno2a	82	69.285	Pygocentrus_nattereri
ENSODEG00000011822	SBNO2	90	65.404	ENSPNAG00000020260	si:ch73-63e15.2	82	67.795	Pygocentrus_nattereri
ENSODEG00000011822	SBNO2	99	83.910	ENSRNOG00000013987	Sbno2	98	84.390	Rattus_norvegicus
ENSODEG00000011822	SBNO2	90	76.702	ENSRBIG00000009740	SBNO2	91	77.121	Rhinopithecus_bieti
ENSODEG00000011822	SBNO2	88	84.783	ENSRROG00000044671	SBNO2	95	86.576	Rhinopithecus_roxellana
ENSODEG00000011822	SBNO2	99	80.556	ENSSBOG00000023562	SBNO2	97	82.033	Saimiri_boliviensis_boliviensis
ENSODEG00000011822	SBNO2	86	75.838	ENSSHAG00000010241	SBNO2	99	75.666	Sarcophilus_harrisii
ENSODEG00000011822	SBNO2	85	65.677	ENSSFOG00015005861	si:ch73-63e15.2	91	66.345	Scleropages_formosus
ENSODEG00000011822	SBNO2	86	66.753	ENSSMAG00000012489	si:ch73-63e15.2	73	67.101	Scophthalmus_maximus
ENSODEG00000011822	SBNO2	86	68.045	ENSSDUG00000003527	si:ch73-63e15.2	73	68.435	Seriola_dumerili
ENSODEG00000011822	SBNO2	86	67.873	ENSSLDG00000004623	si:ch73-63e15.2	73	68.202	Seriola_lalandi_dorsalis
ENSODEG00000011822	SBNO2	85	68.366	ENSSPAG00000017717	si:ch73-63e15.2	74	68.343	Stegastes_partitus
ENSODEG00000011822	SBNO2	98	83.763	ENSSSCG00000030042	SBNO2	97	84.683	Sus_scrofa
ENSODEG00000011822	SBNO2	84	66.755	ENSTRUG00000018193	si:ch73-63e15.2	87	67.109	Takifugu_rubripes
ENSODEG00000011822	SBNO2	88	86.335	ENSUAMG00000006568	SBNO2	99	84.268	Ursus_americanus
ENSODEG00000011822	SBNO2	99	79.106	ENSVVUG00000022823	SBNO2	86	85.702	Vulpes_vulpes
ENSODEG00000011822	SBNO2	76	76.436	ENSXETG00000021579	sbno2	90	76.436	Xenopus_tropicalis
ENSODEG00000011822	SBNO2	71	67.662	ENSXCOG00000009209	si:ch73-63e15.2	91	68.432	Xiphophorus_couchianus
ENSODEG00000011822	SBNO2	89	65.705	ENSXMAG00000012091	si:ch73-63e15.2	81	70.934	Xiphophorus_maculatus