EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000011878 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 1395 bases
Position: chrJH651573.1:7435398-7436792
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000016132	RRM_1	PF00076.22	3.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000016340	-	1194	-	ENSODEP00000016132	397 (aa)	-	-

Gene Model

Click here to download ENSODEG00000011878's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000011878's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000011878	-	78	53.823	ENSODEG00000019012	-	74	51.151
ENSODEG00000011878	-	64	53.008	ENSODEG00000007817	-	73	45.596
ENSODEG00000011878	-	96	52.941	ENSODEG00000004982	-	98	54.964
ENSODEG00000011878	-	94	48.804	ENSODEG00000000530	-	87	49.756
ENSODEG00000011878	-	100	63.675	ENSODEG00000002224	-	100	64.103
ENSODEG00000011878	-	100	61.935	ENSODEG00000002994	-	100	62.151
ENSODEG00000011878	-	78	50.456	ENSODEG00000005485	SFPQ	57	51.411

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000011878	-	100	66.879	ENSG00000147140	NONO	100	70.064	Homo_sapiens
ENSODEG00000011878	-	94	53.695	ENSAPOG00000023320	nono	91	54.115	Acanthochromis_polyacanthus
ENSODEG00000011878	-	100	67.021	ENSAMEG00000016057	NONO	100	66.809	Ailuropoda_melanoleuca
ENSODEG00000011878	-	88	57.784	ENSACIG00000019987	nono	81	59.889	Amphilophus_citrinellus
ENSODEG00000011878	-	94	53.676	ENSAOCG00000018863	nono	91	54.094	Amphiprion_ocellaris
ENSODEG00000011878	-	82	59.649	ENSAPEG00000011383	nono	83	60.417	Amphiprion_percula
ENSODEG00000011878	-	92	65.023	ENSAPLG00000002642	NONO	98	65.166	Anas_platyrhynchos
ENSODEG00000011878	-	77	71.598	ENSACAG00000015026	NONO	90	65.558	Anolis_carolinensis
ENSODEG00000011878	-	99	59.732	ENSANAG00000027089	-	99	59.955	Aotus_nancymaae
ENSODEG00000011878	-	99	52.459	ENSANAG00000035751	-	96	68.750	Aotus_nancymaae
ENSODEG00000011878	-	100	66.879	ENSANAG00000033266	-	100	66.667	Aotus_nancymaae
ENSODEG00000011878	-	81	61.471	ENSACLG00000012045	nono	85	64.062	Astatotilapia_calliptera
ENSODEG00000011878	-	93	57.286	ENSAMXG00000033933	nono	88	57.360	Astyanax_mexicanus
ENSODEG00000011878	-	100	67.021	ENSBTAG00000012152	NONO	100	66.809	Bos_taurus
ENSODEG00000011878	-	100	66.879	ENSCJAG00000036744	NONO	96	72.549	Callithrix_jacchus
ENSODEG00000011878	-	100	67.021	ENSCAFG00000017071	NONO	100	66.809	Canis_familiaris
ENSODEG00000011878	-	100	67.021	ENSCAFG00000003207	-	100	65.957	Canis_familiaris
ENSODEG00000011878	-	89	63.065	ENSCAFG00000030809	-	99	63.357	Canis_familiaris
ENSODEG00000011878	-	55	68.775	ENSCAFG00000013766	-	100	49.890	Canis_familiaris
ENSODEG00000011878	-	100	66.809	ENSCAFG00020020298	-	100	66.595	Canis_lupus_dingo
ENSODEG00000011878	-	80	61.892	ENSCHIG00000009602	-	89	62.162	Capra_hircus
ENSODEG00000011878	-	100	69.816	ENSCHIG00000000365	-	100	69.124	Capra_hircus
ENSODEG00000011878	-	99	60.000	ENSTSYG00000036306	-	100	59.574	Carlito_syrichta
ENSODEG00000011878	-	100	61.926	ENSTSYG00000034207	-	99	61.693	Carlito_syrichta
ENSODEG00000011878	-	100	66.453	ENSTSYG00000007423	-	99	66.026	Carlito_syrichta
ENSODEG00000011878	-	100	62.971	ENSCAPG00000011616	-	87	69.286	Cavia_aperea
ENSODEG00000011878	-	100	56.849	ENSCAPG00000002723	-	100	55.023	Cavia_aperea
ENSODEG00000011878	-	76	67.089	ENSCAPG00000006522	-	84	67.089	Cavia_aperea
ENSODEG00000011878	-	99	54.897	ENSCAPG00000002354	-	97	54.628	Cavia_aperea
ENSODEG00000011878	-	83	71.622	ENSCPOG00000036719	-	91	71.351	Cavia_porcellus
ENSODEG00000011878	-	100	64.330	ENSCPOG00000023605	-	86	69.762	Cavia_porcellus
ENSODEG00000011878	-	100	65.768	ENSCPOG00000010263	-	87	70.952	Cavia_porcellus
ENSODEG00000011878	-	100	63.067	ENSCPOG00000038668	-	100	61.489	Cavia_porcellus
ENSODEG00000011878	-	100	54.875	ENSCPOG00000026604	-	99	54.120	Cavia_porcellus
ENSODEG00000011878	-	100	60.991	ENSCATG00000039509	NONO	100	60.776	Cercocebus_atys
ENSODEG00000011878	-	100	66.667	ENSCLAG00000003642	NONO	100	66.245	Chinchilla_lanigera
ENSODEG00000011878	-	100	61.814	ENSCPBG00000016659	NONO	90	65.877	Chrysemys_picta_bellii
ENSODEG00000011878	-	100	67.532	ENSCANG00000025310	NONO	100	66.667	Colobus_angolensis_palliatus
ENSODEG00000011878	-	100	66.525	ENSCGRG00001000065	Nono	100	66.102	Cricetulus_griseus_chok1gshd
ENSODEG00000011878	-	92	69.928	ENSCGRG00000004508	Nono	100	70.406	Cricetulus_griseus_crigri
ENSODEG00000011878	-	83	58.908	ENSCSEG00000008189	NONO	72	62.813	Cynoglossus_semilaevis
ENSODEG00000011878	-	83	58.908	ENSCSEG00000010708	nono	70	62.500	Cynoglossus_semilaevis
ENSODEG00000011878	-	83	58.213	ENSCVAG00000003978	nono	89	54.198	Cyprinodon_variegatus
ENSODEG00000011878	-	77	64.486	ENSDARG00000020482	nono	89	56.709	Danio_rerio
ENSODEG00000011878	-	57	71.739	ENSDNOG00000031430	-	100	71.739	Dasypus_novemcinctus
ENSODEG00000011878	-	69	62.153	ENSDNOG00000032215	-	95	62.057	Dasypus_novemcinctus
ENSODEG00000011878	-	100	67.167	ENSDORG00000009294	Nono	100	66.953	Dipodomys_ordii
ENSODEG00000011878	-	76	65.915	ENSETEG00000013823	NONO	77	66.761	Echinops_telfairi
ENSODEG00000011878	-	100	67.021	ENSECAG00000008502	NONO	100	66.809	Equus_caballus
ENSODEG00000011878	-	100	67.521	ENSEEUG00000014404	NONO	100	66.667	Erinaceus_europaeus
ENSODEG00000011878	-	100	53.571	ENSELUG00000001083	nono	71	65.723	Esox_lucius
ENSODEG00000011878	-	100	67.021	ENSFCAG00000043511	-	100	66.809	Felis_catus
ENSODEG00000011878	-	100	57.955	ENSFALG00000011765	NONO	100	55.556	Ficedula_albicollis
ENSODEG00000011878	-	100	54.860	ENSFDAG00000006143	-	100	54.860	Fukomys_damarensis
ENSODEG00000011878	-	100	66.809	ENSFDAG00000012809	-	100	66.809	Fukomys_damarensis
ENSODEG00000011878	-	78	61.231	ENSFHEG00000009714	nono	85	55.820	Fundulus_heteroclitus
ENSODEG00000011878	-	100	61.426	ENSGALG00000005507	NONO	89	65.166	Gallus_gallus
ENSODEG00000011878	-	83	60.519	ENSGAFG00000011460	nono	86	57.447	Gambusia_affinis
ENSODEG00000011878	-	90	55.729	ENSGACG00000011824	nono	91	54.500	Gasterosteus_aculeatus
ENSODEG00000011878	-	100	63.226	ENSGAGG00000025400	-	91	63.774	Gopherus_agassizii
ENSODEG00000011878	-	95	69.159	ENSGGOG00000006194	NONO	97	68.925	Gorilla_gorilla
ENSODEG00000011878	-	100	56.833	ENSGGOG00000036327	-	99	61.233	Gorilla_gorilla
ENSODEG00000011878	-	88	58.311	ENSHBUG00000010741	nono	81	60.446	Haplochromis_burtoni
ENSODEG00000011878	-	100	67.091	ENSHGLG00000005550	NONO	100	67.304	Heterocephalus_glaber_female
ENSODEG00000011878	-	100	67.091	ENSHGLG00100013511	NONO	100	67.304	Heterocephalus_glaber_male
ENSODEG00000011878	-	92	56.888	ENSHCOG00000016441	nono	91	56.378	Hippocampus_comes
ENSODEG00000011878	-	85	60.331	ENSIPUG00000018271	nono	86	59.788	Ictalurus_punctatus
ENSODEG00000011878	-	100	67.021	ENSSTOG00000015869	NONO	100	66.809	Ictidomys_tridecemlineatus
ENSODEG00000011878	-	100	66.383	ENSJJAG00000017151	-	100	65.957	Jaculus_jaculus
ENSODEG00000011878	-	100	55.556	ENSJJAG00000001971	-	100	55.889	Jaculus_jaculus
ENSODEG00000011878	-	88	56.614	ENSKMAG00000002798	nono	83	57.105	Kryptolebias_marmoratus
ENSODEG00000011878	-	85	59.066	ENSLBEG00000022623	nono	83	59.944	Labrus_bergylta
ENSODEG00000011878	-	77	61.337	ENSLACG00000000598	NONO	76	69.304	Latimeria_chalumnae
ENSODEG00000011878	-	76	59.226	ENSLOCG00000014739	nono	90	56.863	Lepisosteus_oculatus
ENSODEG00000011878	-	100	68.722	ENSLAFG00000013422	NONO	100	69.163	Loxodonta_africana
ENSODEG00000011878	-	100	66.879	ENSMFAG00000041557	NONO	100	66.667	Macaca_fascicularis
ENSODEG00000011878	-	83	68.325	ENSMMUG00000020481	NONO	100	69.110	Macaca_mulatta
ENSODEG00000011878	-	100	66.879	ENSMNEG00000009698	NONO	100	66.667	Macaca_nemestrina
ENSODEG00000011878	-	100	66.879	ENSMLEG00000042452	NONO	100	66.667	Mandrillus_leucophaeus
ENSODEG00000011878	-	83	60.519	ENSMAMG00000007314	nono	91	54.839	Mastacembelus_armatus
ENSODEG00000011878	-	81	61.471	ENSMZEG00005010199	nono	85	64.062	Maylandia_zebra
ENSODEG00000011878	-	83	76.632	ENSMGAG00000008869	NONO	98	65.403	Meleagris_gallopavo
ENSODEG00000011878	-	100	66.456	ENSMAUG00000016243	Nono	100	66.034	Mesocricetus_auratus
ENSODEG00000011878	-	100	66.809	ENSMICG00000000232	NONO	100	66.809	Microcebus_murinus
ENSODEG00000011878	-	100	64.319	ENSMOCG00000020099	-	95	63.934	Microtus_ochrogaster
ENSODEG00000011878	-	94	70.188	ENSMOCG00000005532	-	93	70.714	Microtus_ochrogaster
ENSODEG00000011878	-	100	57.359	ENSMOCG00000021293	-	100	60.390	Microtus_ochrogaster
ENSODEG00000011878	-	93	55.919	ENSMMOG00000015503	nono	77	58.919	Mola_mola
ENSODEG00000011878	-	94	66.822	ENSMODG00000004445	NONO	97	67.143	Monodelphis_domestica
ENSODEG00000011878	-	85	58.127	ENSMALG00000001310	nono	92	56.397	Monopterus_albus
ENSODEG00000011878	-	100	66.173	ENSMUSG00000031311	Nono	100	65.962	Mus_musculus
ENSODEG00000011878	-	100	65.895	MGP_PahariEiJ_G0031826	Nono	100	65.684	Mus_pahari
ENSODEG00000011878	-	100	67.021	ENSMPUG00000004937	NONO	100	66.809	Mustela_putorius_furo
ENSODEG00000011878	-	100	66.596	ENSMLUG00000002489	NONO	89	66.383	Myotis_lucifugus
ENSODEG00000011878	-	100	67.167	ENSNGAG00000010857	Nono	100	67.597	Nannospalax_galili
ENSODEG00000011878	-	88	58.311	ENSNBRG00000017083	nono	81	60.446	Neolamprologus_brichardi
ENSODEG00000011878	-	100	67.532	ENSNLEG00000001278	NONO	100	69.110	Nomascus_leucogenys
ENSODEG00000011878	-	100	59.660	ENSMEUG00000004294	NONO	89	63.095	Notamacropus_eugenii
ENSODEG00000011878	-	61	91.304	ENSOPRG00000001139	-	69	91.304	Ochotona_princeps
ENSODEG00000011878	-	88	58.047	ENSONIG00000020497	nono	81	60.167	Oreochromis_niloticus
ENSODEG00000011878	-	94	69.484	ENSOCUG00000021848	-	88	70.883	Oryctolagus_cuniculus
ENSODEG00000011878	-	99	51.606	ENSOCUG00000024801	-	97	50.459	Oryctolagus_cuniculus
ENSODEG00000011878	-	78	61.846	ENSORLG00000012801	nono	73	62.500	Oryzias_latipes
ENSODEG00000011878	-	78	61.846	ENSORLG00020003761	nono	73	62.500	Oryzias_latipes_hni
ENSODEG00000011878	-	78	61.846	ENSORLG00015018033	nono	73	62.500	Oryzias_latipes_hsok
ENSODEG00000011878	-	83	59.366	ENSOMEG00000012702	nono	73	63.125	Oryzias_melastigma
ENSODEG00000011878	-	100	66.879	ENSOGAG00000004834	NONO	100	66.667	Otolemur_garnettii
ENSODEG00000011878	-	100	66.809	ENSOARG00000016966	NONO	99	66.596	Ovis_aries
ENSODEG00000011878	-	100	59.871	ENSPPAG00000041394	-	99	62.335	Pan_paniscus
ENSODEG00000011878	-	100	67.312	ENSPPAG00000032487	NONO	100	66.667	Pan_paniscus
ENSODEG00000011878	-	100	67.021	ENSPPRG00000024537	-	100	66.809	Panthera_pardus
ENSODEG00000011878	-	100	67.021	ENSPTIG00000016068	-	100	66.809	Panthera_tigris_altaica
ENSODEG00000011878	-	100	59.871	ENSPTRG00000051228	-	100	62.335	Pan_troglodytes
ENSODEG00000011878	-	100	67.312	ENSPTRG00000022010	NONO	100	66.667	Pan_troglodytes
ENSODEG00000011878	-	100	46.512	ENSPANG00000035017	-	99	46.723	Papio_anubis
ENSODEG00000011878	-	100	66.879	ENSPANG00000013979	NONO	100	66.667	Papio_anubis
ENSODEG00000011878	-	99	53.505	ENSPKIG00000014500	nono	90	56.716	Paramormyrops_kingsleyae
ENSODEG00000011878	-	94	51.463	ENSPKIG00000019475	-	92	60.000	Paramormyrops_kingsleyae
ENSODEG00000011878	-	100	63.931	ENSPSIG00000010678	NONO	99	63.834	Pelodiscus_sinensis
ENSODEG00000011878	-	95	54.926	ENSPMGG00000023030	nono	90	55.556	Periophthalmus_magnuspinnatus
ENSODEG00000011878	-	100	66.737	ENSPEMG00000011150	Nono	100	66.314	Peromyscus_maniculatus_bairdii
ENSODEG00000011878	-	100	62.979	ENSPCIG00000026515	NONO	88	68.116	Phascolarctos_cinereus
ENSODEG00000011878	-	77	57.585	ENSPFOG00000016436	nono	85	53.191	Poecilia_formosa
ENSODEG00000011878	-	83	59.078	ENSPLAG00000017492	nono	85	56.383	Poecilia_latipinna
ENSODEG00000011878	-	78	62.154	ENSPMEG00000021530	nono	81	58.708	Poecilia_mexicana
ENSODEG00000011878	-	83	59.942	ENSPREG00000010014	nono	85	57.181	Poecilia_reticulata
ENSODEG00000011878	-	100	67.516	ENSPPYG00000020451	NONO	100	67.304	Pongo_abelii
ENSODEG00000011878	-	100	66.526	ENSPCAG00000002541	NONO	100	66.316	Procavia_capensis
ENSODEG00000011878	-	100	67.021	ENSPCOG00000008197	NONO	100	66.809	Propithecus_coquereli
ENSODEG00000011878	-	100	67.021	ENSPVAG00000016503	NONO	100	66.596	Pteropus_vampyrus
ENSODEG00000011878	-	95	57.843	ENSPNAG00000008232	nono	79	57.935	Pygocentrus_nattereri
ENSODEG00000011878	-	100	66.176	ENSRNOG00000003689	Nono	100	65.756	Rattus_norvegicus
ENSODEG00000011878	-	79	66.940	ENSRBIG00000037966	NONO	100	67.760	Rhinopithecus_bieti
ENSODEG00000011878	-	100	67.532	ENSRROG00000043203	NONO	100	66.667	Rhinopithecus_roxellana
ENSODEG00000011878	-	100	66.879	ENSSBOG00000032772	-	100	66.667	Saimiri_boliviensis_boliviensis
ENSODEG00000011878	-	100	65.086	ENSSBOG00000027683	-	99	64.871	Saimiri_boliviensis_boliviensis
ENSODEG00000011878	-	99	57.871	ENSSBOG00000018932	-	99	57.238	Saimiri_boliviensis_boliviensis
ENSODEG00000011878	-	100	63.235	ENSSHAG00000010195	NONO	88	67.619	Sarcophilus_harrisii
ENSODEG00000011878	-	98	55.660	ENSSFOG00015008964	nono	88	64.873	Scleropages_formosus
ENSODEG00000011878	-	93	50.877	ENSSFOG00015000137	-	90	51.500	Scleropages_formosus
ENSODEG00000011878	-	83	59.483	ENSSDUG00000021886	nono	91	55.112	Seriola_dumerili
ENSODEG00000011878	-	83	59.483	ENSSLDG00000012392	nono	91	55.112	Seriola_lalandi_dorsalis
ENSODEG00000011878	-	70	72.669	ENSSARG00000007959	NONO	100	61.752	Sorex_araneus
ENSODEG00000011878	-	83	63.144	ENSSPUG00000003116	NONO	100	63.281	Sphenodon_punctatus
ENSODEG00000011878	-	84	59.003	ENSSPAG00000012663	nono	91	54.703	Stegastes_partitus
ENSODEG00000011878	-	100	67.021	ENSSSCG00000023245	NONO	100	66.809	Sus_scrofa
ENSODEG00000011878	-	100	63.362	ENSTGUG00000007048	NONO	100	62.690	Taeniopygia_guttata
ENSODEG00000011878	-	85	58.402	ENSTRUG00000005554	nono	90	55.276	Takifugu_rubripes
ENSODEG00000011878	-	100	67.021	ENSTTRG00000009605	NONO	100	66.809	Tursiops_truncatus
ENSODEG00000011878	-	100	66.809	ENSUAMG00000008220	NONO	100	66.595	Ursus_americanus
ENSODEG00000011878	-	100	67.021	ENSUMAG00000021550	NONO	100	66.809	Ursus_maritimus
ENSODEG00000011878	-	100	67.021	ENSVPAG00000002272	NONO	100	66.809	Vicugna_pacos
ENSODEG00000011878	-	100	65.745	ENSVVUG00000003390	-	100	65.532	Vulpes_vulpes
ENSODEG00000011878	-	100	54.989	ENSXETG00000020868	nono	90	59.145	Xenopus_tropicalis
ENSODEG00000011878	-	83	60.231	ENSXCOG00000015587	nono	86	57.181	Xiphophorus_couchianus
ENSODEG00000011878	-	83	60.231	ENSXMAG00000019883	nono	86	57.181	Xiphophorus_maculatus