EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSODEG00000011907 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
threonine--tRNA ligase%2C cytoplasmic-like
Gene Type
protein_coding
Species
Octodon_degus
Status
putative
Strand
Minus strand
Length
1920 bases
Position
chrJH651729.1:2779740-2781659
Accession
101581501
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSODEP00000016177tRNA_SADPF07973.142.6e-1111
ENSODEP00000016177HGTP_anticodonPF03129.202.3e-2011
ENSODEP00000016177tRNA-synt_2bPF00587.255.1e-3511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSODET00000016385-1896XM_012517781ENSODEP00000016177631 (aa)XP_012373235-
Gene Model
Click here to download ENSODEG00000011907's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000011907's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSODEG00000011907-10074.022ENSODEG00000014454TARSL28174.022
ENSODEG00000011907-8992.443ENSODEG00000002089-8693.896
ENSODEG00000011907-10052.816ENSODEG00000011883TARS28954.921
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSODEG00000011907-10093.427ENSG00000113407TARS8893.427Homo_sapiens
ENSODEG00000011907-8879.255ENSAPOG00000021756tarsl210079.255Acanthochromis_polyacanthus
ENSODEG00000011907-10085.625ENSAPOG00000013465tars8885.625Acanthochromis_polyacanthus
ENSODEG00000011907-8286.879ENSAMEG00000003451TARS8786.879Ailuropoda_melanoleuca
ENSODEG00000011907-10078.438ENSACIG00000005189tarsl29178.438Amphilophus_citrinellus
ENSODEG00000011907-10081.719ENSACIG00000015719tars10081.062Amphilophus_citrinellus
ENSODEG00000011907-10086.250ENSAOCG00000023847tars8886.250Amphiprion_ocellaris
ENSODEG00000011907-10077.969ENSAOCG00000009313tarsl29675.469Amphiprion_ocellaris
ENSODEG00000011907-10077.969ENSAPEG00000007987tarsl29277.969Amphiprion_percula
ENSODEG00000011907-10086.250ENSAPEG00000013710tars8886.250Amphiprion_percula
ENSODEG00000011907-10086.562ENSATEG00000023154tars8986.562Anabas_testudineus
ENSODEG00000011907-10079.062ENSATEG00000004034tarsl27979.062Anabas_testudineus
ENSODEG00000011907-10090.454ENSAPLG00000016069TARS9390.454Anas_platyrhynchos
ENSODEG00000011907-10092.801ENSANAG00000020786TARS8892.801Aotus_nancymaae
ENSODEG00000011907-10085.312ENSACLG00000018603tars9285.312Astatotilapia_calliptera
ENSODEG00000011907-10077.969ENSACLG00000018601tarsl27977.969Astatotilapia_calliptera
ENSODEG00000011907-10085.759ENSAMXG00000014068tars8885.759Astyanax_mexicanus
ENSODEG00000011907-10079.219ENSAMXG00000020852tarsl27579.219Astyanax_mexicanus
ENSODEG00000011907-10093.271ENSBTAG00000014261TARS8893.271Bos_taurus
ENSODEG00000011907-10092.332ENSCJAG00000018663TARS8892.332Callithrix_jacchus
ENSODEG00000011907-10092.958ENSCAFG00000018858TARS8892.958Canis_familiaris
ENSODEG00000011907-10092.958ENSCAFG00020016830TARS8892.958Canis_lupus_dingo
ENSODEG00000011907-10092.645ENSCHIG00000013566TARS9292.645Capra_hircus
ENSODEG00000011907-10093.427ENSTSYG00000010851TARS8893.427Carlito_syrichta
ENSODEG00000011907-10072.897ENSCAPG00000011392TARS9472.897Cavia_aperea
ENSODEG00000011907-10093.897ENSCPOG00000014012TARS8593.897Cavia_porcellus
ENSODEG00000011907-10092.332ENSCCAG00000019805TARS8892.332Cebus_capucinus
ENSODEG00000011907-10093.427ENSCATG00000038037TARS8893.427Cercocebus_atys
ENSODEG00000011907-10095.149ENSCLAG00000008983TARS8995.149Chinchilla_lanigera
ENSODEG00000011907-10092.801ENSCSAG00000017162TARS8892.801Chlorocebus_sabaeus
ENSODEG00000011907-9694.454ENSCHOG00000013155-10094.454Choloepus_hoffmanni
ENSODEG00000011907-9269.661ENSCHOG00000005325-9069.661Choloepus_hoffmanni
ENSODEG00000011907-10089.515ENSCPBG00000013172TARS9389.515Chrysemys_picta_bellii
ENSODEG00000011907-10065.571ENSCPBG00000008240-9165.571Chrysemys_picta_bellii
ENSODEG00000011907-9673.539ENSCING00000004310-9873.539Ciona_intestinalis
ENSODEG00000011907-10093.271ENSCANG00000031774TARS8893.271Colobus_angolensis_palliatus
ENSODEG00000011907-10093.897ENSCGRG00001022888Tars9293.897Cricetulus_griseus_chok1gshd
ENSODEG00000011907-10093.897ENSCGRG00000000978Tars9293.897Cricetulus_griseus_crigri
ENSODEG00000011907-10085.781ENSCSEG00000007462tars8985.781Cynoglossus_semilaevis
ENSODEG00000011907-10077.500ENSCSEG00000011120tarsl28477.500Cynoglossus_semilaevis
ENSODEG00000011907-10086.228ENSCVAG00000012329tars9381.847Cyprinodon_variegatus
ENSODEG00000011907-10077.969ENSCVAG00000009572tarsl28077.969Cyprinodon_variegatus
ENSODEG00000011907-6776.212ENSDARG00000092774tarsl210076.212Danio_rerio
ENSODEG00000011907-10085.446ENSDARG00000013250tars8985.446Danio_rerio
ENSODEG00000011907-10091.236ENSDNOG00000017275TARS8891.236Dasypus_novemcinctus
ENSODEG00000011907-10094.210ENSDORG00000008801Tars9394.210Dipodomys_ordii
ENSODEG00000011907-9887.380ENSETEG00000006292TARS8887.380Echinops_telfairi
ENSODEG00000011907-10079.812ENSEBUG00000010935tarsl29079.812Eptatretus_burgeri
ENSODEG00000011907-10092.801ENSEASG00005015075TARS9692.801Equus_asinus_asinus
ENSODEG00000011907-10093.114ENSECAG00000020854TARS8993.114Equus_caballus
ENSODEG00000011907-10082.473ENSEEUG00000005701TARS8882.473Erinaceus_europaeus
ENSODEG00000011907-10082.786ENSELUG00000011403tars9185.093Esox_lucius
ENSODEG00000011907-10077.344ENSELUG00000007414tarsl29676.899Esox_lucius
ENSODEG00000011907-10093.271ENSFCAG00000002351TARS8893.271Felis_catus
ENSODEG00000011907-10089.828ENSFALG00000002131TARS8889.828Ficedula_albicollis
ENSODEG00000011907-10093.584ENSFDAG00000005928TARS9593.584Fukomys_damarensis
ENSODEG00000011907-10085.625ENSFHEG00000004551tars8885.625Fundulus_heteroclitus
ENSODEG00000011907-10077.812ENSFHEG00000010406tarsl29674.062Fundulus_heteroclitus
ENSODEG00000011907-10071.250ENSGMOG00000013046tars9571.250Gadus_morhua
ENSODEG00000011907-10067.812ENSGMOG00000002140tarsl29267.812Gadus_morhua
ENSODEG00000011907-10089.828ENSGALG00000003288TARS8189.828Gallus_gallus
ENSODEG00000011907-10080.997ENSGAFG00000017077tars9680.997Gambusia_affinis
ENSODEG00000011907-9778.871ENSGAFG00000009417tarsl27578.871Gambusia_affinis
ENSODEG00000011907-10085.938ENSGACG00000004921tars8789.381Gasterosteus_aculeatus
ENSODEG00000011907-10077.812ENSGACG00000014631tarsl29277.812Gasterosteus_aculeatus
ENSODEG00000011907-10089.358ENSGAGG00000019945TARS9089.358Gopherus_agassizii
ENSODEG00000011907-10065.415ENSGAGG00000001743-9165.415Gopherus_agassizii
ENSODEG00000011907-10093.271ENSGGOG00000014336TARS9193.271Gorilla_gorilla
ENSODEG00000011907-10078.125ENSHBUG00000020986tarsl27978.125Haplochromis_burtoni
ENSODEG00000011907-10085.312ENSHBUG00000011236tars8985.312Haplochromis_burtoni
ENSODEG00000011907-10095.149ENSHGLG00000004347TARS8995.149Heterocephalus_glaber_female
ENSODEG00000011907-10095.149ENSHGLG00100016510-8995.149Heterocephalus_glaber_male
ENSODEG00000011907-9976.332ENSHGLG00100009436-9176.332Heterocephalus_glaber_male
ENSODEG00000011907-10084.058ENSHCOG00000019262tars9284.058Hippocampus_comes
ENSODEG00000011907-10077.778ENSHCOG00000001263tarsl210078.984Hippocampus_comes
ENSODEG00000011907-10085.290ENSIPUG00000012104tars8885.290Ictalurus_punctatus
ENSODEG00000011907-10078.594ENSIPUG00000010218tarsl27878.594Ictalurus_punctatus
ENSODEG00000011907-10094.210ENSSTOG00000000811TARS9394.210Ictidomys_tridecemlineatus
ENSODEG00000011907-10093.114ENSJJAG00000012711Tars9293.114Jaculus_jaculus
ENSODEG00000011907-10084.820ENSKMAG00000006120tars8884.820Kryptolebias_marmoratus
ENSODEG00000011907-10076.875ENSKMAG00000001740tarsl29476.875Kryptolebias_marmoratus
ENSODEG00000011907-10078.125ENSLBEG00000018541tarsl29675.781Labrus_bergylta
ENSODEG00000011907-10073.438ENSLBEG00000018238-9673.438Labrus_bergylta
ENSODEG00000011907-10086.250ENSLBEG00000014334tars8886.250Labrus_bergylta
ENSODEG00000011907-10057.277ENSLACG00000008719-8857.121Latimeria_chalumnae
ENSODEG00000011907-10080.595ENSLACG00000018690-8280.595Latimeria_chalumnae
ENSODEG00000011907-10086.854ENSLACG00000009316TARS8986.854Latimeria_chalumnae
ENSODEG00000011907-10085.469ENSLOCG00000011402tars8885.469Lepisosteus_oculatus
ENSODEG00000011907-7875.659ENSLOCG00000014607tarsl26275.659Lepisosteus_oculatus
ENSODEG00000011907-10093.114ENSLAFG00000009855TARS8993.114Loxodonta_africana
ENSODEG00000011907-10093.427ENSMFAG00000043658TARS8893.427Macaca_fascicularis
ENSODEG00000011907-10093.427ENSMMUG00000016224TARS9293.427Macaca_mulatta
ENSODEG00000011907-10093.427ENSMNEG00000035174TARS8893.427Macaca_nemestrina
ENSODEG00000011907-10087.132ENSMLEG00000037573TARS10085.464Mandrillus_leucophaeus
ENSODEG00000011907-10078.438ENSMAMG00000005294tarsl27878.438Mastacembelus_armatus
ENSODEG00000011907-10085.938ENSMAMG00000007405tars8885.938Mastacembelus_armatus
ENSODEG00000011907-10078.125ENSMZEG00005005731tarsl27978.125Maylandia_zebra
ENSODEG00000011907-10085.312ENSMZEG00005012967tars8885.312Maylandia_zebra
ENSODEG00000011907-10050.932ENSMGAG00000002934-9150.932Meleagris_gallopavo
ENSODEG00000011907-10093.740ENSMICG00000005593TARS10093.783Microcebus_murinus
ENSODEG00000011907-10093.271ENSMOCG00000002397Tars9291.796Microtus_ochrogaster
ENSODEG00000011907-8878.901ENSMMOG00000016276tarsl210078.901Mola_mola
ENSODEG00000011907-10086.250ENSMMOG00000017581tars9786.250Mola_mola
ENSODEG00000011907-10092.175ENSMODG00000020405TARS8892.175Monodelphis_domestica
ENSODEG00000011907-10085.312ENSMALG00000001448tars8885.312Monopterus_albus
ENSODEG00000011907-10077.812ENSMALG00000014473tarsl27477.812Monopterus_albus
ENSODEG00000011907-10093.584MGP_CAROLIEiJ_G0019674Tars8993.584Mus_caroli
ENSODEG00000011907-10093.897ENSMUSG00000022241Tars8993.897Mus_musculus
ENSODEG00000011907-10093.740MGP_PahariEiJ_G0016054Tars8993.740Mus_pahari
ENSODEG00000011907-10093.897MGP_SPRETEiJ_G0020571Tars8993.897Mus_spretus
ENSODEG00000011907-10092.958ENSMPUG00000015177TARS8892.958Mustela_putorius_furo
ENSODEG00000011907-10092.488ENSMLUG00000011189TARS8892.488Myotis_lucifugus
ENSODEG00000011907-10094.366ENSNGAG00000021115Tars9294.366Nannospalax_galili
ENSODEG00000011907-5176.276ENSNBRG00000008049-6976.276Neolamprologus_brichardi
ENSODEG00000011907-10085.625ENSNBRG00000022198tars8885.625Neolamprologus_brichardi
ENSODEG00000011907-10092.801ENSNLEG00000014187TARS9592.801Nomascus_leucogenys
ENSODEG00000011907-8880.000ENSMEUG00000002186-10080.000Notamacropus_eugenii
ENSODEG00000011907-9484.934ENSMEUG00000011216-9484.934Notamacropus_eugenii
ENSODEG00000011907-10085.133ENSOPRG00000003544TARS8885.133Ochotona_princeps
ENSODEG00000011907-10078.438ENSONIG00000002904tarsl28178.438Oreochromis_niloticus
ENSODEG00000011907-10085.381ENSONIG00000016982tars8885.381Oreochromis_niloticus
ENSODEG00000011907-10091.080ENSOANG00000014432TARS8991.080Ornithorhynchus_anatinus
ENSODEG00000011907-10094.523ENSOCUG00000000684TARS8894.523Oryctolagus_cuniculus
ENSODEG00000011907-10077.812ENSORLG00000014313tarsl28277.812Oryzias_latipes
ENSODEG00000011907-10084.688ENSORLG00000001603tars8884.688Oryzias_latipes
ENSODEG00000011907-10078.125ENSORLG00020019614tarsl29675.469Oryzias_latipes_hni
ENSODEG00000011907-10084.688ENSORLG00020008243tars8884.688Oryzias_latipes_hni
ENSODEG00000011907-10084.531ENSORLG00015000487tars8884.531Oryzias_latipes_hsok
ENSODEG00000011907-10078.281ENSORLG00015017865tarsl28378.281Oryzias_latipes_hsok
ENSODEG00000011907-10078.281ENSOMEG00000017135tarsl27978.281Oryzias_melastigma
ENSODEG00000011907-10085.156ENSOMEG00000013835tars8885.156Oryzias_melastigma
ENSODEG00000011907-10094.053ENSOGAG00000009129TARS8894.053Otolemur_garnettii
ENSODEG00000011907-10092.958ENSOARG00000012085TARS8892.958Ovis_aries
ENSODEG00000011907-10093.427ENSPPAG00000021251TARS8893.427Pan_paniscus
ENSODEG00000011907-10093.427ENSPPRG00000009764TARS8893.427Panthera_pardus
ENSODEG00000011907-10093.114ENSPTIG00000020328TARS8893.114Panthera_tigris_altaica
ENSODEG00000011907-10093.114ENSPTRG00000016775TARS8893.114Pan_troglodytes
ENSODEG00000011907-10093.271ENSPANG00000011000TARS8893.271Papio_anubis
ENSODEG00000011907-10076.875ENSPKIG00000020010tarsl27976.875Paramormyrops_kingsleyae
ENSODEG00000011907-10085.759ENSPKIG00000010725tars9685.759Paramormyrops_kingsleyae
ENSODEG00000011907-10089.045ENSPSIG00000015697TARS7189.045Pelodiscus_sinensis
ENSODEG00000011907-9964.521ENSPSIG00000015501-9764.521Pelodiscus_sinensis
ENSODEG00000011907-8879.433ENSPMGG00000006955tarsl210079.433Periophthalmus_magnuspinnatus
ENSODEG00000011907-10087.793ENSPMGG00000012642tars9687.793Periophthalmus_magnuspinnatus
ENSODEG00000011907-10092.801ENSPEMG00000024237Tars9290.432Peromyscus_maniculatus_bairdii
ENSODEG00000011907-10079.812ENSPMAG00000004957tarsl27879.812Petromyzon_marinus
ENSODEG00000011907-10090.767ENSPCIG00000016353TARS9890.767Phascolarctos_cinereus
ENSODEG00000011907-10078.281ENSPFOG00000013908tarsl27978.281Poecilia_formosa
ENSODEG00000011907-10085.312ENSPFOG00000010429tars8885.312Poecilia_formosa
ENSODEG00000011907-10085.156ENSPLAG00000008773tars9685.156Poecilia_latipinna
ENSODEG00000011907-10078.281ENSPLAG00000011183tarsl28178.281Poecilia_latipinna
ENSODEG00000011907-10085.312ENSPMEG00000016101tars8885.312Poecilia_mexicana
ENSODEG00000011907-10078.281ENSPMEG00000011154tarsl27978.281Poecilia_mexicana
ENSODEG00000011907-10076.108ENSPREG00000008101tarsl29675.349Poecilia_reticulata
ENSODEG00000011907-10085.156ENSPREG00000008856tars8885.156Poecilia_reticulata
ENSODEG00000011907-9693.008ENSPPYG00000015382TARS9993.008Pongo_abelii
ENSODEG00000011907-7492.537ENSPCAG00000006885TARS7492.537Procavia_capensis
ENSODEG00000011907-10076.056ENSPCOG00000019044TARS9076.719Propithecus_coquereli
ENSODEG00000011907-10092.645ENSPVAG00000008939TARS8892.645Pteropus_vampyrus
ENSODEG00000011907-10085.312ENSPNYG00000003864tars8885.312Pundamilia_nyererei
ENSODEG00000011907-10075.469ENSPNYG00000009768tarsl29675.469Pundamilia_nyererei
ENSODEG00000011907-10086.228ENSPNAG00000014293tars8886.228Pygocentrus_nattereri
ENSODEG00000011907-10079.062ENSPNAG00000015361tarsl27779.062Pygocentrus_nattereri
ENSODEG00000011907-10093.740ENSRNOG00000019023Tars9293.740Rattus_norvegicus
ENSODEG00000011907-10093.114ENSRBIG00000009935TARS8893.114Rhinopithecus_bieti
ENSODEG00000011907-10093.114ENSRROG00000030698TARS8893.114Rhinopithecus_roxellana
ENSODEG00000011907-10092.645ENSSBOG00000021854TARS8892.645Saimiri_boliviensis_boliviensis
ENSODEG00000011907-6091.753ENSSHAG00000011084TARS9191.753Sarcophilus_harrisii
ENSODEG00000011907-9576.683ENSSFOG00015017057tarsl27976.683Scleropages_formosus
ENSODEG00000011907-10086.385ENSSFOG00015015118tars8886.385Scleropages_formosus
ENSODEG00000011907-10078.906ENSSMAG00000009984tarsl27878.906Scophthalmus_maximus
ENSODEG00000011907-10086.094ENSSMAG00000009718tars8886.094Scophthalmus_maximus
ENSODEG00000011907-10078.750ENSSDUG00000007476tarsl27978.750Seriola_dumerili
ENSODEG00000011907-10085.469ENSSDUG00000014184tars9282.188Seriola_dumerili
ENSODEG00000011907-10078.750ENSSLDG00000016574tarsl27978.750Seriola_lalandi_dorsalis
ENSODEG00000011907-10085.469ENSSLDG00000020363tars8885.469Seriola_lalandi_dorsalis
ENSODEG00000011907-8682.790ENSSARG00000009829TARS8782.790Sorex_araneus
ENSODEG00000011907-9654.072ENSSPUG00000000604-9463.142Sphenodon_punctatus
ENSODEG00000011907-10088.419ENSSPUG00000016844TARS9388.419Sphenodon_punctatus
ENSODEG00000011907-9287.140ENSSPAG00000019655tars8387.140Stegastes_partitus
ENSODEG00000011907-10077.812ENSSPAG00000020448tarsl27977.812Stegastes_partitus
ENSODEG00000011907-10093.271ENSSSCG00000016817TARS9693.271Sus_scrofa
ENSODEG00000011907-10089.828ENSTGUG00000001925TARS9189.828Taeniopygia_guttata
ENSODEG00000011907-6774.142ENSTRUG00000003405tarsl210074.142Takifugu_rubripes
ENSODEG00000011907-10086.228ENSTRUG00000002380tars8886.228Takifugu_rubripes
ENSODEG00000011907-10073.323ENSTNIG00000011928tarsl28073.323Tetraodon_nigroviridis
ENSODEG00000011907-9985.893ENSTNIG00000015959tars9085.491Tetraodon_nigroviridis
ENSODEG00000011907-7893.282ENSTBEG00000002740TARS6993.282Tupaia_belangeri
ENSODEG00000011907-10091.080ENSTTRG00000005996TARS9091.080Tursiops_truncatus
ENSODEG00000011907-10092.958ENSUAMG00000027966TARS8892.958Ursus_americanus
ENSODEG00000011907-10093.114ENSUMAG00000013743TARS8893.114Ursus_maritimus
ENSODEG00000011907-8986.538ENSVPAG00000010118TARS8686.538Vicugna_pacos
ENSODEG00000011907-10092.958ENSVVUG00000022139TARS8092.958Vulpes_vulpes
ENSODEG00000011907-10077.934ENSXETG00000020313tarsl27977.934Xenopus_tropicalis
ENSODEG00000011907-10062.519ENSXETG00000018640-9562.519Xenopus_tropicalis
ENSODEG00000011907-10088.732ENSXETG00000009868tars8988.732Xenopus_tropicalis
ENSODEG00000011907-10085.000ENSXCOG00000009480tars9785.000Xiphophorus_couchianus
ENSODEG00000011907-10074.844ENSXCOG00000012648tarsl29474.844Xiphophorus_couchianus
ENSODEG00000011907-10078.281ENSXMAG00000016645tarsl29674.844Xiphophorus_maculatus
ENSODEG00000011907-10085.156ENSXMAG00000002878tars8885.156Xiphophorus_maculatus

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