EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000011974 (Gene tree)
Gene ID: 101568384
Gene Symbol: MSI2
Alias: -
Full Name: musashi RNA binding protein 2
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 369279 bases
Position: chrJH651737.1:983897-1353175
Accession: 101568384
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000016268	RRM_1	PF00076.22	3.4e-34	1	2
ENSODEP00000016268	RRM_1	PF00076.22	3.4e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000016478	MSI2-201	1041	XM_004645274	ENSODEP00000016268	346 (aa)	XP_004645331	UPI000040B05D

Gene Model

Click here to download ENSODEG00000011974's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000011974's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000011974	MSI2	51	41.333	ENSODEG00000008615	-	52	40.789
ENSODEG00000011974	MSI2	50	42.857	ENSODEG00000003691	-	53	43.478
ENSODEG00000011974	MSI2	55	46.465	ENSODEG00000001897	HNRNPD	77	40.800
ENSODEG00000011974	MSI2	53	49.189	ENSODEG00000003135	-	86	42.412
ENSODEG00000011974	MSI2	53	49.189	ENSODEG00000002106	-	63	42.023
ENSODEG00000011974	MSI2	50	37.179	ENSODEG00000005746	-	75	37.179
ENSODEG00000011974	MSI2	50	41.279	ENSODEG00000008757	-	59	41.279
ENSODEG00000011974	MSI2	50	42.308	ENSODEG00000016578	-	61	42.268
ENSODEG00000011974	MSI2	50	43.407	ENSODEG00000003755	-	52	44.022
ENSODEG00000011974	MSI2	54	48.663	ENSODEG00000006830	HNRNPAB	70	47.549
ENSODEG00000011974	MSI2	52	42.553	ENSODEG00000006322	-	64	41.441
ENSODEG00000011974	MSI2	94	71.084	ENSODEG00000006328	MSI1	99	68.807
ENSODEG00000011974	MSI2	53	48.108	ENSODEG00000020231	-	71	40.856
ENSODEG00000011974	MSI2	53	45.405	ENSODEG00000004187	-	82	39.300
ENSODEG00000011974	MSI2	53	48.649	ENSODEG00000000376	-	71	41.406

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000011974	MSI2	100	94.798	ENSG00000153944	MSI2	100	100.000	Homo_sapiens
ENSODEG00000011974	MSI2	100	88.184	ENSAPOG00000001658	msi2a	100	87.749	Acanthochromis_polyacanthus
ENSODEG00000011974	MSI2	94	100.000	ENSAMEG00000002697	MSI2	99	100.000	Ailuropoda_melanoleuca
ENSODEG00000011974	MSI2	100	74.745	ENSACIG00000009475	msi2a	100	74.745	Amphilophus_citrinellus
ENSODEG00000011974	MSI2	55	76.667	ENSAOCG00000014822	msi2a	69	76.667	Amphiprion_ocellaris
ENSODEG00000011974	MSI2	100	88.184	ENSAPEG00000007706	msi2a	100	87.749	Amphiprion_percula
ENSODEG00000011974	MSI2	94	87.500	ENSATEG00000003301	-	100	87.500	Anabas_testudineus
ENSODEG00000011974	MSI2	100	88.184	ENSATEG00000010498	msi2a	100	87.749	Anabas_testudineus
ENSODEG00000011974	MSI2	94	71.105	ENSACAG00000005452	MSI2	68	97.826	Anolis_carolinensis
ENSODEG00000011974	MSI2	100	94.798	ENSANAG00000037827	MSI2	100	94.798	Aotus_nancymaae
ENSODEG00000011974	MSI2	100	87.896	ENSACLG00000007752	msi2a	100	87.464	Astatotilapia_calliptera
ENSODEG00000011974	MSI2	100	88.761	ENSAMXG00000032796	msi2a	100	85.549	Astyanax_mexicanus
ENSODEG00000011974	MSI2	100	86.127	ENSAMXG00000010474	msi2b	100	86.127	Astyanax_mexicanus
ENSODEG00000011974	MSI2	94	94.154	ENSBTAG00000004406	MSI2	97	94.154	Bos_taurus
ENSODEG00000011974	MSI2	68	60.643	WBGene00003423	msi-1	76	60.643	Caenorhabditis_elegans
ENSODEG00000011974	MSI2	100	94.798	ENSCJAG00000013998	MSI2	100	94.798	Callithrix_jacchus
ENSODEG00000011974	MSI2	94	98.746	ENSCAFG00020025620	MSI2	81	98.746	Canis_lupus_dingo
ENSODEG00000011974	MSI2	100	93.353	ENSCHIG00000016580	MSI2	100	93.353	Capra_hircus
ENSODEG00000011974	MSI2	94	89.667	ENSCPOG00000034042	MSI2	99	89.667	Cavia_porcellus
ENSODEG00000011974	MSI2	100	94.798	ENSCCAG00000033927	MSI2	100	94.798	Cebus_capucinus
ENSODEG00000011974	MSI2	100	93.642	ENSCATG00000040879	MSI2	100	93.642	Cercocebus_atys
ENSODEG00000011974	MSI2	100	100.000	ENSCLAG00000014325	MSI2	100	100.000	Chinchilla_lanigera
ENSODEG00000011974	MSI2	100	94.798	ENSCSAG00000005633	MSI2	100	94.798	Chlorocebus_sabaeus
ENSODEG00000011974	MSI2	71	100.000	ENSCHOG00000008660	MSI2	83	100.000	Choloepus_hoffmanni
ENSODEG00000011974	MSI2	94	93.688	ENSCPBG00000009942	MSI2	96	93.688	Chrysemys_picta_bellii
ENSODEG00000011974	MSI2	60	72.000	ENSCING00000018579	-	97	50.000	Ciona_intestinalis
ENSODEG00000011974	MSI2	62	66.667	ENSCSAVG00000010397	-	72	65.517	Ciona_savignyi
ENSODEG00000011974	MSI2	94	100.000	ENSCANG00000036414	MSI2	100	100.000	Colobus_angolensis_palliatus
ENSODEG00000011974	MSI2	100	94.236	ENSCGRG00001013330	Msi2	100	94.236	Cricetulus_griseus_chok1gshd
ENSODEG00000011974	MSI2	94	99.693	ENSCGRG00000003141	Msi2	100	99.693	Cricetulus_griseus_crigri
ENSODEG00000011974	MSI2	100	75.723	ENSCSEG00000003266	-	100	75.723	Cynoglossus_semilaevis
ENSODEG00000011974	MSI2	54	73.913	ENSCSEG00000013549	msi2a	100	73.913	Cynoglossus_semilaevis
ENSODEG00000011974	MSI2	79	69.340	ENSCSEG00000013557	msi2a	83	67.925	Cynoglossus_semilaevis
ENSODEG00000011974	MSI2	100	87.896	ENSCVAG00000017075	msi2a	100	87.464	Cyprinodon_variegatus
ENSODEG00000011974	MSI2	93	88.820	ENSDARG00000032614	msi2b	100	98.020	Danio_rerio
ENSODEG00000011974	MSI2	100	79.639	ENSDARG00000033901	msi2a	100	79.639	Danio_rerio
ENSODEG00000011974	MSI2	94	94.118	ENSDNOG00000014501	MSI2	100	94.118	Dasypus_novemcinctus
ENSODEG00000011974	MSI2	79	81.395	ENSDORG00000005394	Msi2	84	81.395	Dipodomys_ordii
ENSODEG00000011974	MSI2	97	59.104	FBgn0260943	Rbp6	88	67.808	Drosophila_melanogaster
ENSODEG00000011974	MSI2	64	76.316	ENSETEG00000012450	-	64	76.316	Echinops_telfairi
ENSODEG00000011974	MSI2	89	68.810	ENSEBUG00000006732	msi2a	87	68.489	Eptatretus_burgeri
ENSODEG00000011974	MSI2	94	89.320	ENSEASG00005002965	MSI2	97	89.143	Equus_asinus_asinus
ENSODEG00000011974	MSI2	100	97.458	ENSECAG00000011435	MSI2	100	97.458	Equus_caballus
ENSODEG00000011974	MSI2	83	79.705	ENSEEUG00000007810	MSI2	100	79.705	Erinaceus_europaeus
ENSODEG00000011974	MSI2	100	87.429	ENSELUG00000001361	msi2b	100	87.429	Esox_lucius
ENSODEG00000011974	MSI2	100	84.682	ENSELUG00000011747	msi2a	100	84.682	Esox_lucius
ENSODEG00000011974	MSI2	54	80.128	ENSFCAG00000033787	-	82	80.128	Felis_catus
ENSODEG00000011974	MSI2	100	94.798	ENSFCAG00000041686	MSI2	100	94.798	Felis_catus
ENSODEG00000011974	MSI2	94	100.000	ENSFDAG00000016118	MSI2	100	100.000	Fukomys_damarensis
ENSODEG00000011974	MSI2	100	87.896	ENSFHEG00000000084	msi2a	96	93.421	Fundulus_heteroclitus
ENSODEG00000011974	MSI2	53	93.269	ENSGMOG00000007596	-	100	93.269	Gadus_morhua
ENSODEG00000011974	MSI2	100	96.532	ENSGALG00000005567	MSI2	100	96.532	Gallus_gallus
ENSODEG00000011974	MSI2	96	75.740	ENSGAFG00000006974	msi2a	90	94.040	Gambusia_affinis
ENSODEG00000011974	MSI2	94	96.053	ENSGAGG00000016542	MSI2	100	96.053	Gopherus_agassizii
ENSODEG00000011974	MSI2	94	100.000	ENSGGOG00000013182	MSI2	100	100.000	Gorilla_gorilla
ENSODEG00000011974	MSI2	100	87.896	ENSHBUG00000020800	msi2a	100	87.464	Haplochromis_burtoni
ENSODEG00000011974	MSI2	100	91.040	ENSHGLG00000012444	MSI2	100	91.040	Heterocephalus_glaber_female
ENSODEG00000011974	MSI2	76	100.000	ENSHGLG00100003744	MSI2	100	100.000	Heterocephalus_glaber_male
ENSODEG00000011974	MSI2	97	85.503	ENSHCOG00000000266	msi2a	97	85.088	Hippocampus_comes
ENSODEG00000011974	MSI2	76	81.369	ENSHCOG00000017241	-	77	81.967	Hippocampus_comes
ENSODEG00000011974	MSI2	96	89.489	ENSIPUG00000003732	msi2b	100	82.081	Ictalurus_punctatus
ENSODEG00000011974	MSI2	100	82.659	ENSIPUG00000021097	msi2a	100	82.659	Ictalurus_punctatus
ENSODEG00000011974	MSI2	94	89.667	ENSSTOG00000007884	MSI2	99	89.667	Ictidomys_tridecemlineatus
ENSODEG00000011974	MSI2	76	88.889	ENSJJAG00000006292	-	100	88.406	Jaculus_jaculus
ENSODEG00000011974	MSI2	96	86.486	ENSKMAG00000009494	msi2a	96	86.747	Kryptolebias_marmoratus
ENSODEG00000011974	MSI2	94	68.915	ENSLBEG00000026223	-	100	68.915	Labrus_bergylta
ENSODEG00000011974	MSI2	100	83.526	ENSLBEG00000007061	msi2a	100	83.526	Labrus_bergylta
ENSODEG00000011974	MSI2	100	82.429	ENSLOCG00000004675	msi2b	100	84.553	Lepisosteus_oculatus
ENSODEG00000011974	MSI2	94	100.000	ENSMFAG00000003775	MSI2	100	100.000	Macaca_fascicularis
ENSODEG00000011974	MSI2	94	100.000	ENSMMUG00000002069	MSI2	100	100.000	Macaca_mulatta
ENSODEG00000011974	MSI2	100	94.798	ENSMNEG00000045275	MSI2	100	94.798	Macaca_nemestrina
ENSODEG00000011974	MSI2	94	100.000	ENSMLEG00000033888	MSI2	100	100.000	Mandrillus_leucophaeus
ENSODEG00000011974	MSI2	96	87.164	ENSMAMG00000002488	-	99	92.715	Mastacembelus_armatus
ENSODEG00000011974	MSI2	100	85.227	ENSMAMG00000010503	msi2a	100	85.795	Mastacembelus_armatus
ENSODEG00000011974	MSI2	100	87.572	ENSMZEG00005007676	msi2a	100	87.572	Maylandia_zebra
ENSODEG00000011974	MSI2	100	99.424	ENSMAUG00000003862	Msi2	100	99.424	Mesocricetus_auratus
ENSODEG00000011974	MSI2	100	94.798	ENSMICG00000013598	-	100	94.798	Microcebus_murinus
ENSODEG00000011974	MSI2	100	76.945	ENSMICG00000032913	-	100	75.504	Microcebus_murinus
ENSODEG00000011974	MSI2	100	99.711	ENSMOCG00000005820	Msi2	100	99.711	Microtus_ochrogaster
ENSODEG00000011974	MSI2	90	81.459	ENSMMOG00000008348	msi2a	90	84.211	Mola_mola
ENSODEG00000011974	MSI2	76	98.551	ENSMODG00000014790	MSI2	100	98.551	Monodelphis_domestica
ENSODEG00000011974	MSI2	100	88.184	ENSMALG00000000071	msi2a	100	93.464	Monopterus_albus
ENSODEG00000011974	MSI2	100	99.711	MGP_CAROLIEiJ_G0016948	Msi2	100	100.000	Mus_caroli
ENSODEG00000011974	MSI2	100	99.711	ENSMUSG00000069769	Msi2	100	100.000	Mus_musculus
ENSODEG00000011974	MSI2	100	99.711	MGP_PahariEiJ_G0018079	Msi2	100	100.000	Mus_pahari
ENSODEG00000011974	MSI2	100	99.711	MGP_SPRETEiJ_G0017795	Msi2	100	100.000	Mus_spretus
ENSODEG00000011974	MSI2	94	94.462	ENSMPUG00000015377	MSI2	97	94.462	Mustela_putorius_furo
ENSODEG00000011974	MSI2	94	94.154	ENSMLUG00000007865	MSI2	97	94.154	Myotis_lucifugus
ENSODEG00000011974	MSI2	100	99.711	ENSNGAG00000017807	Msi2	100	99.711	Nannospalax_galili
ENSODEG00000011974	MSI2	100	83.237	ENSNBRG00000014596	msi2a	92	94.079	Neolamprologus_brichardi
ENSODEG00000011974	MSI2	94	100.000	ENSNLEG00000008059	MSI2	100	100.000	Nomascus_leucogenys
ENSODEG00000011974	MSI2	64	88.816	ENSOPRG00000000872	-	64	88.816	Ochotona_princeps
ENSODEG00000011974	MSI2	55	94.040	ENSONIG00000001972	msi2a	84	94.040	Oreochromis_niloticus
ENSODEG00000011974	MSI2	93	95.745	ENSOANG00000005667	MSI2	77	95.745	Ornithorhynchus_anatinus
ENSODEG00000011974	MSI2	94	94.462	ENSOCUG00000010440	MSI2	97	94.462	Oryctolagus_cuniculus
ENSODEG00000011974	MSI2	96	87.387	ENSORLG00000009671	msi2a	95	87.651	Oryzias_latipes
ENSODEG00000011974	MSI2	94	88.650	ENSORLG00020021556	msi2a	95	88.182	Oryzias_latipes_hni
ENSODEG00000011974	MSI2	96	87.387	ENSORLG00015004592	msi2a	95	87.651	Oryzias_latipes_hsok
ENSODEG00000011974	MSI2	100	82.081	ENSOMEG00000000146	msi2a	98	86.520	Oryzias_melastigma
ENSODEG00000011974	MSI2	94	90.154	ENSOGAG00000005621	MSI2	99	90.154	Otolemur_garnettii
ENSODEG00000011974	MSI2	94	100.000	ENSPPAG00000037697	MSI2	100	100.000	Pan_paniscus
ENSODEG00000011974	MSI2	94	94.462	ENSPPRG00000001848	MSI2	91	99.103	Panthera_pardus
ENSODEG00000011974	MSI2	70	78.512	ENSPTIG00000021873	-	92	78.512	Panthera_tigris_altaica
ENSODEG00000011974	MSI2	94	100.000	ENSPTIG00000021678	MSI2	96	100.000	Panthera_tigris_altaica
ENSODEG00000011974	MSI2	94	100.000	ENSPTRG00000009437	MSI2	100	100.000	Pan_troglodytes
ENSODEG00000011974	MSI2	100	94.798	ENSPANG00000022319	MSI2	100	94.798	Papio_anubis
ENSODEG00000011974	MSI2	100	81.720	ENSPKIG00000007038	-	100	80.645	Paramormyrops_kingsleyae
ENSODEG00000011974	MSI2	100	76.543	ENSPSIG00000008618	MSI2	87	96.642	Pelodiscus_sinensis
ENSODEG00000011974	MSI2	100	82.948	ENSPMGG00000005888	msi2a	100	82.948	Periophthalmus_magnuspinnatus
ENSODEG00000011974	MSI2	100	95.480	ENSPCIG00000006063	MSI2	100	95.480	Phascolarctos_cinereus
ENSODEG00000011974	MSI2	54	91.429	ENSPFOG00000019337	MSI2	92	91.429	Poecilia_formosa
ENSODEG00000011974	MSI2	55	90.210	ENSPLAG00000000436	msi2a	76	90.845	Poecilia_latipinna
ENSODEG00000011974	MSI2	55	79.720	ENSPMEG00000013247	msi2a	80	79.720	Poecilia_mexicana
ENSODEG00000011974	MSI2	99	81.214	ENSPREG00000000881	msi2a	99	81.214	Poecilia_reticulata
ENSODEG00000011974	MSI2	94	89.844	ENSPPYG00000008244	-	100	89.844	Pongo_abelii
ENSODEG00000011974	MSI2	74	65.625	ENSPCAG00000010552	MSI2	100	65.625	Procavia_capensis
ENSODEG00000011974	MSI2	94	85.531	ENSPVAG00000017053	MSI2	100	85.531	Pteropus_vampyrus
ENSODEG00000011974	MSI2	100	87.572	ENSPNYG00000018393	msi2a	100	87.572	Pundamilia_nyererei
ENSODEG00000011974	MSI2	100	88.761	ENSPNAG00000014957	msi2a	100	86.416	Pygocentrus_nattereri
ENSODEG00000011974	MSI2	100	85.591	ENSPNAG00000000844	msi2b	100	83.237	Pygocentrus_nattereri
ENSODEG00000011974	MSI2	94	93.919	ENSRNOG00000025338	Msi2	100	93.919	Rattus_norvegicus
ENSODEG00000011974	MSI2	94	100.000	ENSSBOG00000026425	MSI2	100	100.000	Saimiri_boliviensis_boliviensis
ENSODEG00000011974	MSI2	94	98.765	ENSSHAG00000008672	MSI2	100	98.765	Sarcophilus_harrisii
ENSODEG00000011974	MSI2	100	62.935	ENSSFOG00015012168	msi2b	82	82.449	Scleropages_formosus
ENSODEG00000011974	MSI2	94	84.615	ENSSFOG00015021687	-	97	82.154	Scleropages_formosus
ENSODEG00000011974	MSI2	100	88.184	ENSSMAG00000018484	msi2a	100	87.749	Scophthalmus_maximus
ENSODEG00000011974	MSI2	100	82.370	ENSSDUG00000021968	-	99	92.053	Seriola_dumerili
ENSODEG00000011974	MSI2	100	88.184	ENSSDUG00000014507	msi2a	100	87.749	Seriola_dumerili
ENSODEG00000011974	MSI2	100	83.526	ENSSLDG00000017172	msi2a	100	83.526	Seriola_lalandi_dorsalis
ENSODEG00000011974	MSI2	55	94.304	ENSSPUG00000000913	-	94	94.304	Sphenodon_punctatus
ENSODEG00000011974	MSI2	100	78.063	ENSSPAG00000017793	msi2a	100	77.778	Stegastes_partitus
ENSODEG00000011974	MSI2	100	97.458	ENSSSCG00000038505	MSI2	100	97.458	Sus_scrofa
ENSODEG00000011974	MSI2	76	99.034	ENSTGUG00000008452	MSI2	100	99.034	Taeniopygia_guttata
ENSODEG00000011974	MSI2	100	82.436	ENSTRUG00000021248	msi2a	100	82.436	Takifugu_rubripes
ENSODEG00000011974	MSI2	70	82.645	ENSTBEG00000001241	MSI2	73	82.645	Tupaia_belangeri
ENSODEG00000011974	MSI2	94	84.375	ENSTTRG00000002189	MSI2	100	84.375	Tursiops_truncatus
ENSODEG00000011974	MSI2	94	94.462	ENSUAMG00000000700	MSI2	97	94.462	Ursus_americanus
ENSODEG00000011974	MSI2	90	86.219	ENSUMAG00000000505	MSI2	95	86.219	Ursus_maritimus
ENSODEG00000011974	MSI2	53	84.615	ENSVPAG00000006837	-	62	84.615	Vicugna_pacos
ENSODEG00000011974	MSI2	100	100.000	ENSVVUG00000011783	MSI2	100	100.000	Vulpes_vulpes
ENSODEG00000011974	MSI2	100	78.238	ENSXCOG00000006113	msi2a	100	78.238	Xiphophorus_couchianus
ENSODEG00000011974	MSI2	100	87.896	ENSXMAG00000000608	msi2a	100	87.464	Xiphophorus_maculatus