EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000012047 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 628 bases
Position: chrJH651546.1:15674389-15675016
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000016368	SAP	PF02037.27	1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000016579	-	555	-	ENSODEP00000016368	184 (aa)	-	-

Gene Model

Click here to download ENSODEG00000012047's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000012047's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000012047	-	100	81.905	ENSODEG00000004608	-	100	80.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000012047	-	100	80.000	ENSG00000205323	SARNP	100	78.095	Homo_sapiens
ENSODEG00000012047	-	89	49.733	ENSAPOG00000005247	sarnp	70	47.399	Acanthochromis_polyacanthus
ENSODEG00000012047	-	100	79.524	ENSAMEG00000011769	SARNP	100	77.619	Ailuropoda_melanoleuca
ENSODEG00000012047	-	97	49.765	ENSAPEG00000016710	sarnp	92	44.000	Amphiprion_percula
ENSODEG00000012047	-	97	48.837	ENSATEG00000024594	sarnp	91	46.193	Anabas_testudineus
ENSODEG00000012047	-	99	69.231	ENSACAG00000015446	SARNP	98	66.827	Anolis_carolinensis
ENSODEG00000012047	-	100	79.048	ENSANAG00000027405	-	100	77.619	Aotus_nancymaae
ENSODEG00000012047	-	100	79.798	ENSANAG00000025021	-	100	80.808	Aotus_nancymaae
ENSODEG00000012047	-	97	50.000	ENSACLG00000016479	sarnp	91	44.335	Astatotilapia_calliptera
ENSODEG00000012047	-	97	52.657	ENSAMXG00000004834	sarnp	91	48.705	Astyanax_mexicanus
ENSODEG00000012047	-	77	80.000	ENSBTAG00000032446	-	80	77.500	Bos_taurus
ENSODEG00000012047	-	100	80.476	ENSBTAG00000020662	SARNP	100	78.571	Bos_taurus
ENSODEG00000012047	-	100	78.571	ENSCJAG00000007853	-	100	76.667	Callithrix_jacchus
ENSODEG00000012047	-	95	79.000	ENSCAFG00000023714	SARNP	92	76.684	Canis_familiaris
ENSODEG00000012047	-	100	72.139	ENSCAFG00020026107	SARNP	90	72.376	Canis_lupus_dingo
ENSODEG00000012047	-	100	70.918	ENSCHIG00000017443	-	100	70.408	Capra_hircus
ENSODEG00000012047	-	98	72.464	ENSCHIG00000013335	-	92	70.466	Capra_hircus
ENSODEG00000012047	-	100	80.476	ENSTSYG00000009225	SARNP	100	78.571	Carlito_syrichta
ENSODEG00000012047	-	100	81.429	ENSCPOG00000011755	-	100	79.524	Cavia_porcellus
ENSODEG00000012047	-	100	80.000	ENSCCAG00000019247	-	100	78.095	Cebus_capucinus
ENSODEG00000012047	-	100	72.772	ENSCCAG00000030892	-	98	70.792	Cebus_capucinus
ENSODEG00000012047	-	100	71.292	ENSCCAG00000004296	-	89	68.229	Cebus_capucinus
ENSODEG00000012047	-	100	80.000	ENSCATG00000045088	SARNP	100	78.095	Cercocebus_atys
ENSODEG00000012047	-	100	81.818	ENSCATG00000042076	-	98	79.293	Cercocebus_atys
ENSODEG00000012047	-	100	81.429	ENSCLAG00000007774	-	100	79.524	Chinchilla_lanigera
ENSODEG00000012047	-	100	80.000	ENSCSAG00000005303	SARNP	98	78.095	Chlorocebus_sabaeus
ENSODEG00000012047	-	93	76.768	ENSCHOG00000005081	SARNP	97	74.093	Choloepus_hoffmanni
ENSODEG00000012047	-	99	70.335	ENSCPBG00000012618	SARNP	99	68.421	Chrysemys_picta_bellii
ENSODEG00000012047	-	99	33.186	ENSCING00000015811	-	87	33.505	Ciona_intestinalis
ENSODEG00000012047	-	100	80.000	ENSCANG00000027918	-	100	78.095	Colobus_angolensis_palliatus
ENSODEG00000012047	-	100	76.963	ENSCGRG00001013880	-	100	75.393	Cricetulus_griseus_chok1gshd
ENSODEG00000012047	-	97	69.430	ENSCGRG00001022403	-	72	68.023	Cricetulus_griseus_chok1gshd
ENSODEG00000012047	-	100	80.952	ENSCGRG00001018129	-	100	79.048	Cricetulus_griseus_chok1gshd
ENSODEG00000012047	-	100	76.963	ENSCGRG00000004298	-	100	75.393	Cricetulus_griseus_crigri
ENSODEG00000012047	-	100	80.952	ENSCGRG00000015182	-	100	79.048	Cricetulus_griseus_crigri
ENSODEG00000012047	-	98	64.593	ENSCGRG00000000109	-	70	63.587	Cricetulus_griseus_crigri
ENSODEG00000012047	-	98	47.143	ENSCVAG00000010924	sarnp	92	44.388	Cyprinodon_variegatus
ENSODEG00000012047	-	97	50.739	ENSDARG00000059357	sarnp	98	49.010	Danio_rerio
ENSODEG00000012047	-	100	79.524	ENSDNOG00000014518	SARNP	100	78.095	Dasypus_novemcinctus
ENSODEG00000012047	-	100	79.524	ENSDORG00000001065	-	100	77.619	Dipodomys_ordii
ENSODEG00000012047	-	99	46.040	ENSEBUG00000016080	sarnp	98	43.350	Eptatretus_burgeri
ENSODEG00000012047	-	100	80.476	ENSECAG00000000708	SARNP	100	78.571	Equus_caballus
ENSODEG00000012047	-	98	49.761	ENSELUG00000020983	sarnp	98	49.758	Esox_lucius
ENSODEG00000012047	-	97	48.113	ENSELUG00000006786	HCC1	92	44.615	Esox_lucius
ENSODEG00000012047	-	100	79.524	ENSFCAG00000037076	SARNP	100	77.619	Felis_catus
ENSODEG00000012047	-	88	61.622	ENSFALG00000000679	SARNP	70	61.798	Ficedula_albicollis
ENSODEG00000012047	-	100	80.952	ENSFDAG00000007766	SARNP	100	79.048	Fukomys_damarensis
ENSODEG00000012047	-	98	46.667	ENSFHEG00000012192	sarnp	91	44.660	Fundulus_heteroclitus
ENSODEG00000012047	-	97	45.274	ENSGMOG00000011467	sarnp	92	41.711	Gadus_morhua
ENSODEG00000012047	-	99	69.856	ENSGALG00000030342	SARNP	99	67.943	Gallus_gallus
ENSODEG00000012047	-	98	46.190	ENSGAFG00000019183	sarnp	91	44.175	Gambusia_affinis
ENSODEG00000012047	-	98	47.196	ENSGACG00000011615	sarnp	92	41.919	Gasterosteus_aculeatus
ENSODEG00000012047	-	100	80.000	ENSGGOG00000013217	SARNP	100	78.095	Gorilla_gorilla
ENSODEG00000012047	-	100	70.813	ENSGGOG00000041309	-	98	67.464	Gorilla_gorilla
ENSODEG00000012047	-	97	50.481	ENSHBUG00000008761	sarnp	91	44.828	Haplochromis_burtoni
ENSODEG00000012047	-	100	80.952	ENSHGLG00000016869	SARNP	100	79.048	Heterocephalus_glaber_female
ENSODEG00000012047	-	100	80.952	ENSHGLG00100014657	SARNP	100	79.048	Heterocephalus_glaber_male
ENSODEG00000012047	-	98	42.254	ENSHCOG00000015510	sarnp	93	40.704	Hippocampus_comes
ENSODEG00000012047	-	98	51.208	ENSIPUG00000012503	Sarnp	91	50.532	Ictalurus_punctatus
ENSODEG00000012047	-	100	81.429	ENSSTOG00000000283	SARNP	100	79.524	Ictidomys_tridecemlineatus
ENSODEG00000012047	-	88	68.617	ENSJJAG00000011057	-	85	66.120	Jaculus_jaculus
ENSODEG00000012047	-	100	74.762	ENSJJAG00000001070	-	100	73.810	Jaculus_jaculus
ENSODEG00000012047	-	97	49.289	ENSKMAG00000013400	sarnp	92	47.179	Kryptolebias_marmoratus
ENSODEG00000012047	-	97	48.804	ENSLBEG00000025038	sarnp	91	48.454	Labrus_bergylta
ENSODEG00000012047	-	95	58.586	ENSLACG00000018719	SARNP	85	56.842	Latimeria_chalumnae
ENSODEG00000012047	-	99	32.407	ENSLACG00000014810	-	90	33.508	Latimeria_chalumnae
ENSODEG00000012047	-	97	56.250	ENSLOCG00000003621	sarnp	92	51.531	Lepisosteus_oculatus
ENSODEG00000012047	-	100	80.476	ENSLAFG00000015053	SARNP	100	78.571	Loxodonta_africana
ENSODEG00000012047	-	100	82.673	ENSMFAG00000032419	-	98	80.198	Macaca_fascicularis
ENSODEG00000012047	-	100	80.000	ENSMFAG00000045270	SARNP	100	78.095	Macaca_fascicularis
ENSODEG00000012047	-	100	79.808	ENSMMUG00000037731	-	100	77.404	Macaca_mulatta
ENSODEG00000012047	-	100	80.000	ENSMMUG00000006289	-	100	78.095	Macaca_mulatta
ENSODEG00000012047	-	100	70.854	ENSMNEG00000030688	-	98	70.833	Macaca_nemestrina
ENSODEG00000012047	-	96	79.500	ENSMNEG00000041520	-	94	77.000	Macaca_nemestrina
ENSODEG00000012047	-	100	80.000	ENSMNEG00000044633	-	100	78.095	Macaca_nemestrina
ENSODEG00000012047	-	100	81.313	ENSMLEG00000037790	-	98	78.788	Mandrillus_leucophaeus
ENSODEG00000012047	-	65	77.698	ENSMLEG00000038545	-	86	74.820	Mandrillus_leucophaeus
ENSODEG00000012047	-	97	46.083	ENSMAMG00000005942	sarnp	95	44.898	Mastacembelus_armatus
ENSODEG00000012047	-	97	50.481	ENSMZEG00005023533	sarnp	91	44.828	Maylandia_zebra
ENSODEG00000012047	-	99	69.856	ENSMGAG00000001807	SARNP	99	67.943	Meleagris_gallopavo
ENSODEG00000012047	-	100	79.524	ENSMAUG00000005256	-	100	77.619	Mesocricetus_auratus
ENSODEG00000012047	-	100	80.476	ENSMICG00000010902	-	100	78.571	Microcebus_murinus
ENSODEG00000012047	-	100	80.476	ENSMOCG00000006502	-	100	78.571	Microtus_ochrogaster
ENSODEG00000012047	-	98	48.000	ENSMMOG00000013258	sarnp	92	45.304	Mola_mola
ENSODEG00000012047	-	87	48.370	ENSMALG00000009106	sarnp	73	44.048	Monopterus_albus
ENSODEG00000012047	-	100	80.000	MGP_CAROLIEiJ_G0015958	-	100	78.095	Mus_caroli
ENSODEG00000012047	-	100	80.000	ENSMUSG00000078427	Sarnp	100	78.095	Mus_musculus
ENSODEG00000012047	-	93	79.188	MGP_PahariEiJ_G0031126	-	100	77.157	Mus_pahari
ENSODEG00000012047	-	100	80.000	MGP_SPRETEiJ_G0016783	-	100	78.095	Mus_spretus
ENSODEG00000012047	-	100	80.000	ENSMPUG00000000885	SARNP	100	78.095	Mustela_putorius_furo
ENSODEG00000012047	-	80	76.048	ENSMLUG00000003565	SARNP	90	77.333	Myotis_lucifugus
ENSODEG00000012047	-	100	79.524	ENSNGAG00000010245	-	100	78.095	Nannospalax_galili
ENSODEG00000012047	-	100	71.921	ENSNLEG00000017599	-	100	69.951	Nomascus_leucogenys
ENSODEG00000012047	-	100	70.476	ENSMEUG00000014879	SARNP	100	70.476	Notamacropus_eugenii
ENSODEG00000012047	-	100	60.952	ENSOPRG00000007733	SARNP	100	60.476	Ochotona_princeps
ENSODEG00000012047	-	98	50.481	ENSONIG00000016523	sarnp	91	44.828	Oreochromis_niloticus
ENSODEG00000012047	-	95	68.966	ENSOANG00000002882	SARNP	97	65.816	Ornithorhynchus_anatinus
ENSODEG00000012047	-	98	77.778	ENSOCUG00000010117	SARNP	93	77.320	Oryctolagus_cuniculus
ENSODEG00000012047	-	97	49.758	ENSORLG00000029565	sarnp	87	46.445	Oryzias_latipes
ENSODEG00000012047	-	97	49.758	ENSORLG00015021649	sarnp	87	46.445	Oryzias_latipes_hsok
ENSODEG00000012047	-	97	49.758	ENSOMEG00000014699	sarnp	91	44.162	Oryzias_melastigma
ENSODEG00000012047	-	78	76.543	ENSOGAG00000001693	SARNP	90	76.000	Otolemur_garnettii
ENSODEG00000012047	-	100	80.476	ENSOARG00000011218	SARNP	100	78.571	Ovis_aries
ENSODEG00000012047	-	100	80.000	ENSPPAG00000039513	SARNP	100	78.095	Pan_paniscus
ENSODEG00000012047	-	100	65.550	ENSPPAG00000042587	-	98	64.115	Pan_paniscus
ENSODEG00000012047	-	100	79.524	ENSPPRG00000020704	SARNP	100	77.619	Panthera_pardus
ENSODEG00000012047	-	100	65.550	ENSPTRG00000046696	-	98	64.115	Pan_troglodytes
ENSODEG00000012047	-	100	80.000	ENSPTRG00000029747	SARNP	100	78.095	Pan_troglodytes
ENSODEG00000012047	-	100	80.000	ENSPANG00000013149	-	100	78.095	Papio_anubis
ENSODEG00000012047	-	100	82.828	ENSPANG00000006001	-	98	80.303	Papio_anubis
ENSODEG00000012047	-	98	53.365	ENSPKIG00000002212	sarnp	99	53.365	Paramormyrops_kingsleyae
ENSODEG00000012047	-	97	67.317	ENSPSIG00000002998	SARNP	91	66.146	Pelodiscus_sinensis
ENSODEG00000012047	-	100	80.000	ENSPEMG00000000923	-	100	78.095	Peromyscus_maniculatus_bairdii
ENSODEG00000012047	-	98	42.180	ENSPMAG00000009808	sarnp	91	45.771	Petromyzon_marinus
ENSODEG00000012047	-	94	77.889	ENSPCIG00000024663	SARNP	96	75.648	Phascolarctos_cinereus
ENSODEG00000012047	-	98	44.286	ENSPFOG00000013517	sarnp	92	44.019	Poecilia_formosa
ENSODEG00000012047	-	98	45.455	ENSPLAG00000017096	sarnp	91	44.660	Poecilia_latipinna
ENSODEG00000012047	-	98	45.455	ENSPMEG00000014306	sarnp	91	44.660	Poecilia_mexicana
ENSODEG00000012047	-	98	43.939	ENSPREG00000019598	sarnp	77	44.068	Poecilia_reticulata
ENSODEG00000012047	-	100	80.000	ENSPPYG00000004630	SARNP	100	78.095	Pongo_abelii
ENSODEG00000012047	-	98	52.683	ENSPNAG00000000975	sarnp	98	52.941	Pygocentrus_nattereri
ENSODEG00000012047	-	100	80.952	ENSRNOG00000030520	Sarnp	100	79.048	Rattus_norvegicus
ENSODEG00000012047	-	100	80.000	ENSRBIG00000039295	-	100	78.095	Rhinopithecus_bieti
ENSODEG00000012047	-	100	70.312	ENSRBIG00000037388	-	98	69.271	Rhinopithecus_bieti
ENSODEG00000012047	-	100	78.641	ENSRBIG00000026928	-	98	76.699	Rhinopithecus_bieti
ENSODEG00000012047	-	94	77.889	ENSRBIG00000019503	-	96	75.879	Rhinopithecus_bieti
ENSODEG00000012047	-	100	78.641	ENSRROG00000044575	-	98	76.699	Rhinopithecus_roxellana
ENSODEG00000012047	-	100	80.000	ENSRROG00000035177	-	100	78.095	Rhinopithecus_roxellana
ENSODEG00000012047	-	100	80.000	ENSSBOG00000035337	-	100	78.095	Saimiri_boliviensis_boliviensis
ENSODEG00000012047	-	100	74.112	ENSSBOG00000022787	-	97	72.081	Saimiri_boliviensis_boliviensis
ENSODEG00000012047	-	100	73.810	ENSSBOG00000028635	-	98	75.238	Saimiri_boliviensis_boliviensis
ENSODEG00000012047	-	100	78.571	ENSSHAG00000008865	SARNP	100	76.667	Sarcophilus_harrisii
ENSODEG00000012047	-	97	47.964	ENSSFOG00015020709	sarnp	98	51.643	Scleropages_formosus
ENSODEG00000012047	-	97	47.418	ENSSMAG00000018587	sarnp	91	42.132	Scophthalmus_maximus
ENSODEG00000012047	-	98	50.239	ENSSDUG00000005484	sarnp	91	48.454	Seriola_dumerili
ENSODEG00000012047	-	98	50.239	ENSSLDG00000003775	sarnp	91	48.454	Seriola_lalandi_dorsalis
ENSODEG00000012047	-	100	59.048	ENSSARG00000004858	SARNP	100	56.190	Sorex_araneus
ENSODEG00000012047	-	95	54.359	ENSSPUG00000015135	SARNP	93	50.549	Sphenodon_punctatus
ENSODEG00000012047	-	100	81.429	ENSSSCG00000000364	SARNP	100	79.524	Sus_scrofa
ENSODEG00000012047	-	93	63.212	ENSTGUG00000016126	SARNP	100	60.622	Taeniopygia_guttata
ENSODEG00000012047	-	98	45.933	ENSTRUG00000009497	-	92	41.753	Takifugu_rubripes
ENSODEG00000012047	-	98	44.700	ENSTNIG00000012432	sarnp	99	42.523	Tetraodon_nigroviridis
ENSODEG00000012047	-	100	84.343	ENSTTRG00000009735	SARNP	100	82.323	Tursiops_truncatus
ENSODEG00000012047	-	76	75.625	ENSUAMG00000015093	-	79	74.172	Ursus_americanus
ENSODEG00000012047	-	93	79.188	ENSVPAG00000009515	SARNP	100	77.157	Vicugna_pacos
ENSODEG00000012047	-	100	79.524	ENSVVUG00000022779	SARNP	100	77.619	Vulpes_vulpes
ENSODEG00000012047	-	98	61.275	ENSXETG00000024657	sarnp	98	59.314	Xenopus_tropicalis
ENSODEG00000012047	-	98	47.143	ENSXMAG00000009356	sarnp	92	43.750	Xiphophorus_maculatus