EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000012083 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 2399 bases
Position: chrJH651524.1:11082386-11084784
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000016416	zf-CCCH_2	PF14608.6	9.5e-16	1	4
ENSODEP00000016416	zf-CCCH_2	PF14608.6	9.5e-16	2	4
ENSODEP00000016416	zf-CCCH_2	PF14608.6	9.5e-16	3	4
ENSODEP00000016416	zf-CCCH_2	PF14608.6	9.5e-16	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000016627	-	2127	-	ENSODEP00000016416	708 (aa)	-	-

Gene Model

Click here to download ENSODEG00000012083's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000012083's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000012083	-	97	84.857	ENSODEG00000008995	-	100	92.308
ENSODEG00000012083	-	63	63.600	ENSODEG00000006035	-	100	63.600

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000012083	-	97	79.647	ENSG00000100722	ZC3H14	100	93.750	Homo_sapiens
ENSODEG00000012083	-	96	38.349	ENSAPOG00000001640	zc3h14	99	38.349	Acanthochromis_polyacanthus
ENSODEG00000012083	-	97	78.883	ENSAMEG00000001478	ZC3H14	99	78.747	Ailuropoda_melanoleuca
ENSODEG00000012083	-	67	60.417	ENSACIG00000003703	zc3h14	90	61.644	Amphilophus_citrinellus
ENSODEG00000012083	-	96	37.987	ENSAOCG00000024218	zc3h14	99	39.060	Amphiprion_ocellaris
ENSODEG00000012083	-	96	37.987	ENSAPEG00000001867	zc3h14	99	39.060	Amphiprion_percula
ENSODEG00000012083	-	91	35.188	ENSATEG00000006018	zc3h14	98	36.415	Anabas_testudineus
ENSODEG00000012083	-	95	60.165	ENSAPLG00000008694	ZC3H14	99	61.264	Anas_platyrhynchos
ENSODEG00000012083	-	96	56.438	ENSACAG00000013021	ZC3H14	97	57.123	Anolis_carolinensis
ENSODEG00000012083	-	62	68.852	ENSANAG00000030417	-	95	68.525	Aotus_nancymaae
ENSODEG00000012083	-	97	76.204	ENSANAG00000032583	-	100	85.065	Aotus_nancymaae
ENSODEG00000012083	-	96	38.670	ENSACLG00000012665	zc3h14	98	38.544	Astatotilapia_calliptera
ENSODEG00000012083	-	96	38.398	ENSAMXG00000013714	zc3h14	99	38.950	Astyanax_mexicanus
ENSODEG00000012083	-	97	74.627	ENSBTAG00000030453	ZC3H14	100	75.170	Bos_taurus
ENSODEG00000012083	-	97	77.310	ENSCJAG00000017345	ZC3H14	100	85.714	Callithrix_jacchus
ENSODEG00000012083	-	97	80.868	ENSCAFG00000017415	ZC3H14	100	80.733	Canis_familiaris
ENSODEG00000012083	-	93	80.282	ENSCAFG00020016522	ZC3H14	99	83.766	Canis_lupus_dingo
ENSODEG00000012083	-	74	79.618	ENSCHIG00000009115	-	100	69.072	Capra_hircus
ENSODEG00000012083	-	97	75.305	ENSCHIG00000022904	ZC3H14	100	81.410	Capra_hircus
ENSODEG00000012083	-	96	73.764	ENSTSYG00000010797	ZC3H14	99	80.519	Carlito_syrichta
ENSODEG00000012083	-	90	77.405	ENSCAPG00000010444	ZC3H14	99	77.405	Cavia_aperea
ENSODEG00000012083	-	97	83.288	ENSCPOG00000013632	ZC3H14	100	83.152	Cavia_porcellus
ENSODEG00000012083	-	97	73.648	ENSCCAG00000036483	-	100	85.065	Cebus_capucinus
ENSODEG00000012083	-	97	79.919	ENSCATG00000026685	ZC3H14	100	85.065	Cercocebus_atys
ENSODEG00000012083	-	97	83.696	ENSCLAG00000010139	ZC3H14	100	89.610	Chinchilla_lanigera
ENSODEG00000012083	-	97	79.919	ENSCSAG00000011569	ZC3H14	100	79.783	Chlorocebus_sabaeus
ENSODEG00000012083	-	95	72.690	ENSCHOG00000000279	-	100	73.241	Choloepus_hoffmanni
ENSODEG00000012083	-	97	63.073	ENSCPBG00000008376	ZC3H14	100	63.073	Chrysemys_picta_bellii
ENSODEG00000012083	-	97	79.240	ENSCANG00000036833	ZC3H14	100	85.065	Colobus_angolensis_palliatus
ENSODEG00000012083	-	97	75.984	ENSCGRG00001015677	Zc3h14	100	82.468	Cricetulus_griseus_chok1gshd
ENSODEG00000012083	-	93	75.493	ENSCGRG00000017688	Zc3h14	100	82.468	Cricetulus_griseus_crigri
ENSODEG00000012083	-	96	36.351	ENSCSEG00000013652	zc3h14	98	36.622	Cynoglossus_semilaevis
ENSODEG00000012083	-	96	38.745	ENSCVAG00000000590	zc3h14	98	38.828	Cyprinodon_variegatus
ENSODEG00000012083	-	96	37.908	ENSDARG00000041402	zc3h14	98	38.472	Danio_rerio
ENSODEG00000012083	-	97	78.726	ENSDNOG00000010289	ZC3H14	100	79.268	Dasypus_novemcinctus
ENSODEG00000012083	-	97	72.677	ENSDORG00000009066	Zc3h14	100	82.468	Dipodomys_ordii
ENSODEG00000012083	-	95	74.553	ENSETEG00000002609	ZC3H14	100	75.241	Echinops_telfairi
ENSODEG00000012083	-	64	69.014	ENSEBUG00000006140	zc3h14	80	69.014	Eptatretus_burgeri
ENSODEG00000012083	-	97	81.004	ENSEASG00005020371	ZC3H14	100	80.868	Equus_asinus_asinus
ENSODEG00000012083	-	97	80.868	ENSECAG00000013214	ZC3H14	100	87.821	Equus_caballus
ENSODEG00000012083	-	95	67.358	ENSEEUG00000003200	-	92	73.282	Erinaceus_europaeus
ENSODEG00000012083	-	96	36.439	ENSELUG00000005015	zc3h14	91	47.368	Esox_lucius
ENSODEG00000012083	-	55	74.359	ENSFCAG00000039611	-	100	71.711	Felis_catus
ENSODEG00000012083	-	97	80.461	ENSFCAG00000012898	-	100	85.897	Felis_catus
ENSODEG00000012083	-	97	57.510	ENSFALG00000012422	ZC3H14	100	58.051	Ficedula_albicollis
ENSODEG00000012083	-	97	82.632	ENSFDAG00000009953	ZC3H14	100	89.103	Fukomys_damarensis
ENSODEG00000012083	-	96	38.904	ENSFHEG00000020403	zc3h14	95	38.767	Fundulus_heteroclitus
ENSODEG00000012083	-	58	57.377	ENSGMOG00000011154	zc3h14	71	56.557	Gadus_morhua
ENSODEG00000012083	-	96	60.822	ENSGALG00000010622	ZC3H14	99	60.685	Gallus_gallus
ENSODEG00000012083	-	96	37.330	ENSGAFG00000002915	zc3h14	97	37.875	Gambusia_affinis
ENSODEG00000012083	-	96	36.388	ENSGACG00000010599	zc3h14	99	37.483	Gasterosteus_aculeatus
ENSODEG00000012083	-	97	62.046	ENSGAGG00000005013	ZC3H14	100	62.180	Gopherus_agassizii
ENSODEG00000012083	-	97	79.864	ENSGGOG00000010278	ZC3H14	98	85.714	Gorilla_gorilla
ENSODEG00000012083	-	96	38.670	ENSHBUG00000012522	zc3h14	98	38.544	Haplochromis_burtoni
ENSODEG00000012083	-	97	82.768	ENSHGLG00000017715	ZC3H14	100	82.632	Heterocephalus_glaber_female
ENSODEG00000012083	-	95	82.621	ENSHGLG00100014539	ZC3H14	100	82.483	Heterocephalus_glaber_male
ENSODEG00000012083	-	96	37.110	ENSHCOG00000007792	zc3h14	98	37.447	Hippocampus_comes
ENSODEG00000012083	-	96	35.862	ENSIPUG00000015945	zc3h14	98	37.103	Ictalurus_punctatus
ENSODEG00000012083	-	95	79.586	ENSSTOG00000013176	ZC3H14	100	85.065	Ictidomys_tridecemlineatus
ENSODEG00000012083	-	95	76.414	ENSJJAG00000005306	-	99	82.468	Jaculus_jaculus
ENSODEG00000012083	-	87	64.606	ENSJJAG00000022340	-	93	64.451	Jaculus_jaculus
ENSODEG00000012083	-	96	38.514	ENSKMAG00000013693	zc3h14	99	38.378	Kryptolebias_marmoratus
ENSODEG00000012083	-	96	39.048	ENSLBEG00000001551	zc3h14	99	39.600	Labrus_bergylta
ENSODEG00000012083	-	96	45.805	ENSLACG00000008327	ZC3H14	98	46.122	Latimeria_chalumnae
ENSODEG00000012083	-	96	41.944	ENSLOCG00000010387	zc3h14	99	41.944	Lepisosteus_oculatus
ENSODEG00000012083	-	97	76.757	ENSLAFG00000002998	ZC3H14	100	76.622	Loxodonta_africana
ENSODEG00000012083	-	97	80.054	ENSMFAG00000032254	ZC3H14	100	85.065	Macaca_fascicularis
ENSODEG00000012083	-	97	80.054	ENSMMUG00000004603	ZC3H14	100	85.065	Macaca_mulatta
ENSODEG00000012083	-	97	80.054	ENSMNEG00000013027	ZC3H14	100	85.065	Macaca_nemestrina
ENSODEG00000012083	-	95	79.862	ENSMLEG00000031286	ZC3H14	100	85.065	Mandrillus_leucophaeus
ENSODEG00000012083	-	96	36.939	ENSMAMG00000017380	zc3h14	99	37.533	Mastacembelus_armatus
ENSODEG00000012083	-	96	38.670	ENSMZEG00005016319	zc3h14	98	38.544	Maylandia_zebra
ENSODEG00000012083	-	95	59.671	ENSMGAG00000013009	ZC3H14	99	59.534	Meleagris_gallopavo
ENSODEG00000012083	-	97	75.170	ENSMAUG00000022152	Zc3h14	100	80.519	Mesocricetus_auratus
ENSODEG00000012083	-	97	78.650	ENSMICG00000016669	ZC3H14	99	78.512	Microcebus_murinus
ENSODEG00000012083	-	97	76.255	ENSMOCG00000014022	Zc3h14	100	82.468	Microtus_ochrogaster
ENSODEG00000012083	-	66	57.639	ENSMMOG00000015654	zc3h14	89	57.639	Mola_mola
ENSODEG00000012083	-	97	70.636	ENSMODG00000003282	ZC3H14	100	70.636	Monodelphis_domestica
ENSODEG00000012083	-	66	54.362	ENSMALG00000003067	zc3h14	89	54.362	Monopterus_albus
ENSODEG00000012083	-	97	75.712	MGP_CAROLIEiJ_G0018012	Zc3h14	99	80.263	Mus_caroli
ENSODEG00000012083	-	97	75.170	ENSMUSG00000021012	Zc3h14	100	76.829	Mus_musculus
ENSODEG00000012083	-	97	75.305	MGP_PahariEiJ_G0029770	Zc3h14	100	75.305	Mus_pahari
ENSODEG00000012083	-	97	78.010	MGP_SPRETEiJ_G0018857	-	84	78.010	Mus_spretus
ENSODEG00000012083	-	94	80.084	ENSMPUG00000008228	ZC3H14	100	79.944	Mustela_putorius_furo
ENSODEG00000012083	-	97	78.455	ENSMLUG00000016321	ZC3H14	100	78.320	Myotis_lucifugus
ENSODEG00000012083	-	97	77.748	ENSNGAG00000017541	Zc3h14	100	84.416	Nannospalax_galili
ENSODEG00000012083	-	67	60.417	ENSNBRG00000019192	zc3h14	92	60.417	Neolamprologus_brichardi
ENSODEG00000012083	-	97	76.119	ENSNLEG00000016907	ZC3H14	100	85.714	Nomascus_leucogenys
ENSODEG00000012083	-	90	78.065	ENSMEUG00000010740	ZC3H14	90	79.032	Notamacropus_eugenii
ENSODEG00000012083	-	96	38.577	ENSONIG00000015292	zc3h14	98	38.451	Oreochromis_niloticus
ENSODEG00000012083	-	87	57.317	ENSOANG00000015633	-	95	57.317	Ornithorhynchus_anatinus
ENSODEG00000012083	-	76	82.692	ENSOCUG00000026622	-	100	82.692	Oryctolagus_cuniculus
ENSODEG00000012083	-	92	77.548	ENSOCUG00000015503	-	100	77.410	Oryctolagus_cuniculus
ENSODEG00000012083	-	96	36.828	ENSORLG00000009049	zc3h14	99	37.500	Oryzias_latipes
ENSODEG00000012083	-	96	37.534	ENSORLG00020002299	zc3h14	99	38.409	Oryzias_latipes_hni
ENSODEG00000012083	-	96	37.585	ENSORLG00015017483	zc3h14	99	37.736	Oryzias_latipes_hsok
ENSODEG00000012083	-	82	33.764	ENSOMEG00000018596	zc3h14	92	35.161	Oryzias_melastigma
ENSODEG00000012083	-	97	78.697	ENSOGAG00000005373	ZC3H14	100	78.562	Otolemur_garnettii
ENSODEG00000012083	-	96	74.216	ENSOARG00000003198	ZC3H14	99	74.761	Ovis_aries
ENSODEG00000012083	-	97	79.783	ENSPPAG00000035751	ZC3H14	100	85.065	Pan_paniscus
ENSODEG00000012083	-	97	80.326	ENSPPRG00000006467	ZC3H14	100	85.897	Panthera_pardus
ENSODEG00000012083	-	95	79.448	ENSPTIG00000012741	ZC3H14	100	79.545	Panthera_tigris_altaica
ENSODEG00000012083	-	97	79.783	ENSPTRG00000006608	ZC3H14	100	85.065	Pan_troglodytes
ENSODEG00000012083	-	97	79.783	ENSPANG00000012704	ZC3H14	100	85.065	Papio_anubis
ENSODEG00000012083	-	96	40.136	ENSPKIG00000014248	zc3h14	99	39.592	Paramormyrops_kingsleyae
ENSODEG00000012083	-	97	59.269	ENSPSIG00000010899	ZC3H14	100	60.000	Pelodiscus_sinensis
ENSODEG00000012083	-	93	68.443	ENSPCIG00000011633	ZC3H14	99	69.285	Phascolarctos_cinereus
ENSODEG00000012083	-	96	38.472	ENSPFOG00000008213	zc3h14	98	38.472	Poecilia_formosa
ENSODEG00000012083	-	91	36.052	ENSPLAG00000006557	zc3h14	98	36.481	Poecilia_latipinna
ENSODEG00000012083	-	96	38.420	ENSPMEG00000018330	zc3h14	98	38.420	Poecilia_mexicana
ENSODEG00000012083	-	96	37.534	ENSPREG00000019413	zc3h14	98	37.586	Poecilia_reticulata
ENSODEG00000012083	-	97	79.512	ENSPPYG00000006053	ZC3H14	100	79.376	Pongo_abelii
ENSODEG00000012083	-	67	81.440	ENSPCAG00000009400	-	68	81.440	Procavia_capensis
ENSODEG00000012083	-	97	70.899	ENSPCOG00000025591	ZC3H14	100	70.756	Propithecus_coquereli
ENSODEG00000012083	-	97	79.320	ENSPVAG00000014133	ZC3H14	100	79.184	Pteropus_vampyrus
ENSODEG00000012083	-	96	38.670	ENSPNYG00000007634	zc3h14	98	38.544	Pundamilia_nyererei
ENSODEG00000012083	-	96	37.517	ENSPNAG00000021318	zc3h14	99	36.966	Pygocentrus_nattereri
ENSODEG00000012083	-	97	75.305	ENSRNOG00000004083	Zc3h14	100	75.305	Rattus_norvegicus
ENSODEG00000012083	-	97	79.919	ENSRBIG00000011607	ZC3H14	100	84.416	Rhinopithecus_bieti
ENSODEG00000012083	-	97	79.919	ENSRROG00000029717	ZC3H14	100	84.416	Rhinopithecus_roxellana
ENSODEG00000012083	-	95	79.034	ENSSBOG00000017936	-	100	84.416	Saimiri_boliviensis_boliviensis
ENSODEG00000012083	-	75	77.273	ENSSBOG00000010853	-	100	77.273	Saimiri_boliviensis_boliviensis
ENSODEG00000012083	-	97	68.606	ENSSHAG00000015169	ZC3H14	99	69.136	Sarcophilus_harrisii
ENSODEG00000012083	-	96	39.815	ENSSFOG00015007976	zc3h14	99	40.212	Scleropages_formosus
ENSODEG00000012083	-	96	38.828	ENSSMAG00000011976	zc3h14	99	39.646	Scophthalmus_maximus
ENSODEG00000012083	-	96	36.927	ENSSDUG00000015595	zc3h14	99	37.871	Seriola_dumerili
ENSODEG00000012083	-	96	37.397	ENSSLDG00000001706	zc3h14	99	38.356	Seriola_lalandi_dorsalis
ENSODEG00000012083	-	93	77.715	ENSSARG00000014192	ZC3H14	100	78.279	Sorex_araneus
ENSODEG00000012083	-	97	59.198	ENSSPUG00000012695	ZC3H14	100	59.336	Sphenodon_punctatus
ENSODEG00000012083	-	96	38.306	ENSSPAG00000014475	zc3h14	99	38.306	Stegastes_partitus
ENSODEG00000012083	-	97	80.326	ENSSSCG00000002426	ZC3H14	100	87.179	Sus_scrofa
ENSODEG00000012083	-	96	59.644	ENSTGUG00000012417	ZC3H14	99	60.192	Taeniopygia_guttata
ENSODEG00000012083	-	96	36.074	ENSTRUG00000009079	zc3h14	99	36.207	Takifugu_rubripes
ENSODEG00000012083	-	96	36.658	ENSTNIG00000016348	zc3h14	99	36.658	Tetraodon_nigroviridis
ENSODEG00000012083	-	77	76.056	ENSTBEG00000000653	-	78	76.056	Tupaia_belangeri
ENSODEG00000012083	-	97	68.886	ENSTTRG00000012877	ZC3H14	92	80.328	Tursiops_truncatus
ENSODEG00000012083	-	97	76.757	ENSUAMG00000008799	ZC3H14	100	83.333	Ursus_americanus
ENSODEG00000012083	-	92	79.232	ENSUMAG00000006669	ZC3H14	100	84.615	Ursus_maritimus
ENSODEG00000012083	-	95	79.448	ENSVPAG00000005488	ZC3H14	100	79.310	Vicugna_pacos
ENSODEG00000012083	-	92	80.228	ENSVVUG00000027875	ZC3H14	100	80.085	Vulpes_vulpes
ENSODEG00000012083	-	96	45.777	ENSXETG00000031997	ZC3H14	98	45.777	Xenopus_tropicalis
ENSODEG00000012083	-	96	37.397	ENSXMAG00000004041	zc3h14	98	37.311	Xiphophorus_maculatus